RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 C11orf68Q9H3H3 251 aaKnown RBP7.32□□□□□ -1.24
LIG1-209ENST00000596104 IGHV3OR16-8A0A075B7F1 116 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 TRDV1A0A1B0GX56 115 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 SMIM30A4D0T7 59 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 MPTX1A8MV57 137 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 SULT1C2O00338 296 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 ZNF207O43670 478 aaKnown RBP7.31□□□□□ -1.24
LIG1-209ENST00000596104 PTHLHP12272 177 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 NQO2P16083 231 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 AQP4P55087 323 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 GNG2P59768 71 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 WT1-ASQ06250 92 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 ZNF124Q15973 351 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 SPSB3Q6PJ21 355 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 ZNF367Q7RTV3 350 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 ZBTB34Q8NCN2 500 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 OR13F1Q8NGS4 319 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 C11orf45Q8TAV5 145 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 SECTM1Q8WVN6 248 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 RARRES2Q99969 163 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 C20orf24Q9BUV8 137 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 COMMD5Q9GZQ3 224 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 MFFQ9GZY8 342 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 CSTL1Q9H114 145 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 TMEM140Q9NV12 185 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 NDUFB11Q9NX14 153 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 SMPXQ9UHP9 88 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 VPS13DQ5THJ4 4388 aa7.31□□□□□ -1.24
LIG1-209ENST00000596104 PCLOQ9Y6V0 5065 aa7.3□□□□□ -1.24
LIG1-209ENST00000596104 IGHV3-21A0A0B4J1V1 117 aa7.3□□□□□ -1.24
LIG1-209ENST00000596104 C15orf62A8K5M9 175 aa7.3□□□□□ -1.24
LIG1-209ENST00000596104 K7EIM0 57 aa7.3□□□□□ -1.24
LIG1-209ENST00000596104 HPRT1P00492 218 aa7.3□□□□□ -1.24
LIG1-209ENST00000596104 PPYP01298 95 aa7.3□□□□□ -1.24
LIG1-209ENST00000596104 SERPINE2P07093 398 aa7.3□□□□□ -1.24
LIG1-209ENST00000596104 OR13C7P0DN81 318 aa7.3□□□□□ -1.24
LIG1-209ENST00000596104 FCGR2CP31995 323 aa7.3□□□□□ -1.24
LIG1-209ENST00000596104 RBMS2Q15434 407 aaKnown RBP7.3□□□□□ -1.24
LIG1-209ENST00000596104 THOC7Q6I9Y2 204 aaKnown RBP7.3□□□□□ -1.24
LIG1-209ENST00000596104 C22orf42Q6IC83 251 aa7.3□□□□□ -1.24
LIG1-209ENST00000596104 SLC25A24Q6NUK1 477 aa7.3□□□□□ -1.24
LIG1-209ENST00000596104 SCARB1Q8WTV0 552 aa7.3□□□□□ -1.24
LIG1-209ENST00000596104 RNF2Q99496 336 aa7.3□□□□□ -1.24
LIG1-209ENST00000596104 C6orf62Q9GZU0 229 aaPredicted RBP7.3□□□□□ -1.24
LIG1-209ENST00000596104 PLEKHA2Q9HB19 425 aa7.3□□□□□ -1.24
LIG1-209ENST00000596104 C21orf62Q9NYP8 219 aa7.3□□□□□ -1.24
LIG1-209ENST00000596104 FBXL17Q9UF56 701 aa7.3□□□□□ -1.24
LIG1-209ENST00000596104 ETV7Q9Y603 341 aa7.3□□□□□ -1.24
LIG1-209ENST00000596104 F11RQ9Y624 299 aaKnown RBP7.3□□□□□ -1.24
LIG1-209ENST00000596104 TEX50A0A1B0GTY4 177 aa7.29□□□□□ -1.24
LIG1-209ENST00000596104 NOTOA8MTQ0 251 aa7.29□□□□□ -1.24
LIG1-209ENST00000596104 CHEK1O14757 476 aa7.29□□□□□ -1.24
LIG1-209ENST00000596104 CYB5BO43169 146 aa7.29□□□□□ -1.24
LIG1-209ENST00000596104 SCGNO76038 276 aa7.29□□□□□ -1.24
LIG1-209ENST00000596104 IFNA4P05014 189 aa7.29□□□□□ -1.24
LIG1-209ENST00000596104 TRAPPC2P0DI81 140 aa7.29□□□□□ -1.24
LIG1-209ENST00000596104 TRAPPC2BP0DI82 140 aa7.29□□□□□ -1.24
LIG1-209ENST00000596104 TCTAP57738 103 aa7.29□□□□□ -1.24
LIG1-209ENST00000596104 CATR1Q13166 79 aa7.29□□□□□ -1.24
LIG1-209ENST00000596104 FAM90A2PQ658T7 463 aa7.29□□□□□ -1.24
LIG1-209ENST00000596104 HSD17B13Q7Z5P4 300 aaPredicted RBP7.29□□□□□ -1.24
LIG1-209ENST00000596104 GVQW1Q8N7I0 195 aa7.29□□□□□ -1.24
LIG1-209ENST00000596104 BEST4Q8NFU0 473 aa7.29□□□□□ -1.24
LIG1-209ENST00000596104 OR1L8Q8NGR8 309 aa7.29□□□□□ -1.24
LIG1-209ENST00000596104 OR11H2Q8NH07 326 aa7.29□□□□□ -1.24
LIG1-209ENST00000596104 C2CD4CQ8TF44 421 aa7.29□□□□□ -1.24
LIG1-209ENST00000596104 NRG4Q8WWG1 115 aa7.29□□□□□ -1.24
LIG1-209ENST00000596104 RHPN1-AS1Q9BWJ2 59 aa7.29□□□□□ -1.24
LIG1-209ENST00000596104 SLC5A7Q9GZV3 580 aa7.29□□□□□ -1.24
LIG1-209ENST00000596104 NDUFA4L2Q9NRX3 87 aa7.29□□□□□ -1.24
LIG1-209ENST00000596104 COMMD9Q9P000 198 aa7.29□□□□□ -1.24
LIG1-209ENST00000596104 APLNQ9ULZ1 77 aa7.29□□□□□ -1.24
LIG1-209ENST00000596104 IGHV7-4-1A0A0J9YVY3 117 aa7.28□□□□□ -1.24
LIG1-209ENST00000596104 CTSGP08311 255 aa7.28□□□□□ -1.24
LIG1-209ENST00000596104 TFPI2P48307 235 aa7.28□□□□□ -1.24
LIG1-209ENST00000596104 CMC4P56277 68 aaPredicted RBP7.28□□□□□ -1.24
LIG1-209ENST00000596104 ARPC4P59998 168 aa7.28□□□□□ -1.24
LIG1-209ENST00000596104 ZNF818PQ6ZRF7 136 aa7.28□□□□□ -1.24
LIG1-209ENST00000596104 HOGA1Q86XE5 327 aa7.28□□□□□ -1.24
LIG1-209ENST00000596104 DMBX1Q8NFW5 382 aa7.28□□□□□ -1.24
LIG1-209ENST00000596104 OR51H1Q8NH63 302 aa7.28□□□□□ -1.24
LIG1-209ENST00000596104 LGALS14Q8TCE9 139 aa7.28□□□□□ -1.24
LIG1-209ENST00000596104 LSM10Q969L4 123 aaKnown RBP7.28□□□□□ -1.24
LIG1-209ENST00000596104 OR10C1Q96KK4 312 aa7.28□□□□□ -1.24
LIG1-209ENST00000596104 RHBDL2Q9NX52 303 aa7.28□□□□□ -1.24
LIG1-209ENST00000596104 DAPK2Q9UIK4 370 aa7.28□□□□□ -1.24
LIG1-209ENST00000596104 IGHV3-49A0A0A0MS15 119 aa7.27□□□□□ -1.25
LIG1-209ENST00000596104 DEFB4AO15263 64 aa7.27□□□□□ -1.25
LIG1-209ENST00000596104 FGF9P31371 208 aaPredicted RBP7.27□□□□□ -1.25
LIG1-209ENST00000596104 FXYD4P59646 89 aa7.27□□□□□ -1.25
LIG1-209ENST00000596104 Q56UQ5 140 aa7.27□□□□□ -1.25
LIG1-209ENST00000596104 CADM3Q8N126 398 aa7.27□□□□□ -1.25
LIG1-209ENST00000596104 UBAC2Q8NBM4 344 aa7.27□□□□□ -1.25
LIG1-209ENST00000596104 TMEM116Q8NCL8 245 aa7.27□□□□□ -1.25
LIG1-209ENST00000596104 GIMAP1Q8WWP7 306 aa7.27□□□□□ -1.25
LIG1-209ENST00000596104 SLC25A38Q96DW6 304 aa7.27□□□□□ -1.25
LIG1-209ENST00000596104 TXNL4BQ9NX01 149 aaKnown RBP7.27□□□□□ -1.25
LIG1-209ENST00000596104 IGKV3-7A0A075B6H7 116 aa7.26□□□□□ -1.25
LIG1-209ENST00000596104 TRAV18A0A075B6X5 111 aa7.26□□□□□ -1.25
LIG1-209ENST00000596104 A0A1B0GVY2 172 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms