RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 SCAF4O95104 1147 aaKnown RBP10.19□□□□□ -0.78
SHKBP1-208ENST00000595726 HRASP01112 189 aa10.19□□□□□ -0.78
SHKBP1-208ENST00000595726 RLN1P04808 185 aa10.19□□□□□ -0.78
SHKBP1-208ENST00000595726 OR9G9P0C7N8 305 aa10.19□□□□□ -0.78
SHKBP1-208ENST00000595726 ATF4P18848 351 aaPredicted RBP10.19□□□□□ -0.78
SHKBP1-208ENST00000595726 NANOS2P60321 138 aaKnown RBP10.19□□□□□ -0.78
SHKBP1-208ENST00000595726 ZNF45Q02386 682 aa10.19□□□□□ -0.78
SHKBP1-208ENST00000595726 AADACL3Q5VUY0 350 aa10.19□□□□□ -0.78
SHKBP1-208ENST00000595726 Q6ZWC4 215 aa10.19□□□□□ -0.78
SHKBP1-208ENST00000595726 RAB2BQ8WUD1 216 aa10.19□□□□□ -0.78
SHKBP1-208ENST00000595726 USMG5Q96IX5 58 aa10.19□□□□□ -0.78
SHKBP1-208ENST00000595726 SPIN2AQ99865 258 aa10.19□□□□□ -0.78
SHKBP1-208ENST00000595726 SPIN2BQ9BPZ2 258 aa10.19□□□□□ -0.78
SHKBP1-208ENST00000595726 EXTL2Q9UBQ6 330 aa10.19□□□□□ -0.78
SHKBP1-208ENST00000595726 TP53TG1Q9Y2A0 90 aa10.19□□□□□ -0.78
SHKBP1-208ENST00000595726 A0A1B0GW64 132 aa10.18□□□□□ -0.78
SHKBP1-208ENST00000595726 TEX22C9J3V5 150 aa10.18□□□□□ -0.78
SHKBP1-208ENST00000595726 E7EUB6 86 aa10.18□□□□□ -0.78
SHKBP1-208ENST00000595726 S1PR2O95136 353 aa10.18□□□□□ -0.78
SHKBP1-208ENST00000595726 HPRT1P00492 218 aa10.18□□□□□ -0.78
SHKBP1-208ENST00000595726 PRH1P02810 166 aa10.18□□□□□ -0.78
SHKBP1-208ENST00000595726 MAS1LP35410 378 aa10.18□□□□□ -0.78
SHKBP1-208ENST00000595726 RPL27AP46776 148 aaKnown RBP10.18□□□□□ -0.78
SHKBP1-208ENST00000595726 TAS2R31P59538 309 aa10.18□□□□□ -0.78
SHKBP1-208ENST00000595726 TM4SF20Q53R12 229 aa10.18□□□□□ -0.78
SHKBP1-208ENST00000595726 RNASE12Q5GAN4 147 aaKnown RBP10.18□□□□□ -0.78
SHKBP1-208ENST00000595726 OR4A47Q6IF82 309 aa10.18□□□□□ -0.78
SHKBP1-208ENST00000595726 OR6F1Q8NGZ6 308 aa10.18□□□□□ -0.78
SHKBP1-208ENST00000595726 MIXL1Q9H2W2 232 aa10.18□□□□□ -0.78
SHKBP1-208ENST00000595726 BET1LQ9NYM9 111 aa10.18□□□□□ -0.78
SHKBP1-208ENST00000595726 TECRQ9NZ01 308 aaKnown RBP10.18□□□□□ -0.78
SHKBP1-208ENST00000595726 FBXL17Q9UF56 701 aa10.18□□□□□ -0.78
SHKBP1-208ENST00000595726 HMX3A6NHT5 357 aa10.17□□□□□ -0.78
SHKBP1-208ENST00000595726 PPP5D1E7EU14 171 aa10.17□□□□□ -0.78
SHKBP1-208ENST00000595726 PGLYRP1O75594 196 aaPredicted RBP10.17□□□□□ -0.78
SHKBP1-208ENST00000595726 IL6RP08887 468 aaPredicted RBP10.17□□□□□ -0.78
SHKBP1-208ENST00000595726 ZNF735P0CB33 412 aa10.17□□□□□ -0.78
SHKBP1-208ENST00000595726 NQO2P16083 231 aa10.17□□□□□ -0.78
SHKBP1-208ENST00000595726 CTRB1P17538 263 aa10.17□□□□□ -0.78
SHKBP1-208ENST00000595726 CBLN1P23435 193 aa10.17□□□□□ -0.78
SHKBP1-208ENST00000595726 TMBIM6P55061 237 aa10.17□□□□□ -0.78
SHKBP1-208ENST00000595726 RPL8P62917 257 aaKnown RBP10.17□□□□□ -0.78
SHKBP1-208ENST00000595726 POU2AF1Q16633 256 aa10.17□□□□□ -0.78
SHKBP1-208ENST00000595726 CTRB2Q6GPI1 263 aa10.17□□□□□ -0.78
SHKBP1-208ENST00000595726 TTC9CQ8N5M4 171 aa10.17□□□□□ -0.78
SHKBP1-208ENST00000595726 TMEM217Q8N7C4 229 aa10.17□□□□□ -0.78
SHKBP1-208ENST00000595726 OR4A5Q8NH83 315 aa10.17□□□□□ -0.78
SHKBP1-208ENST00000595726 CD300LFQ8TDQ1 290 aa10.17□□□□□ -0.78
SHKBP1-208ENST00000595726 RNF183Q96D59 192 aa10.17□□□□□ -0.78
SHKBP1-208ENST00000595726 BCL7BQ9BQE9 202 aa10.17□□□□□ -0.78
SHKBP1-208ENST00000595726 AIFM2Q9BRQ8 373 aa10.17□□□□□ -0.78
SHKBP1-208ENST00000595726 PLEKHA2Q9HB19 425 aa10.17□□□□□ -0.78
SHKBP1-208ENST00000595726 AKIP1Q9NQ31 210 aa10.17□□□□□ -0.78
SHKBP1-208ENST00000595726 COMMD9Q9P000 198 aa10.17□□□□□ -0.78
SHKBP1-208ENST00000595726 KLK11Q9UBX7 282 aa10.17□□□□□ -0.78
SHKBP1-208ENST00000595726 TRBV9A0A0B4J1U6 114 aa10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 PRSS29PA6NIE9 313 aa10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 CGB1A6NKQ9 187 aa10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 FAM223BA6NKX1 122 aa10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 M0QYG6 137 aa10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 GPR31O00270 319 aa10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 RGS5O15539 181 aa10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 OR2C1O95371 312 aa10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 MYOD1P15172 320 aa10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 HLA-GP17693 338 aa10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 RPL5P46777 297 aaKnown RBP10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 TSPAN5P62079 268 aa10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 RHOGP84095 191 aa10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 EXOSC2Q13868 293 aaKnown RBP10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 C19orf35Q6ZS72 473 aa10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 FAM223AQ8IWN6 122 aa10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 CMTM1Q8IZ96 169 aa10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 OR52I2Q8NH67 350 aa10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 DYNC2LI1Q8TCX1 351 aa10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 FYTTD1Q96QD9 318 aaKnown RBP10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 ABHD1Q96SE0 405 aa10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 HRASLSQ9HDD0 168 aa10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 TMEM140Q9NV12 185 aa10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 CCDC59Q9P031 241 aaKnown RBP10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 MLXQ9UH92 298 aa10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 DMRT1Q9Y5R6 373 aa10.16□□□□□ -0.78
SHKBP1-208ENST00000595726 TRAV3A0A0B4J244 114 aa10.15□□□□□ -0.78
SHKBP1-208ENST00000595726 MARCH11A6NNE9 402 aa10.15□□□□□ -0.78
SHKBP1-208ENST00000595726 NPIPB5A8MRT5 1133 aa10.15□□□□□ -0.78
SHKBP1-208ENST00000595726 CTDSP2O14595 271 aa10.15□□□□□ -0.78
SHKBP1-208ENST00000595726 IFNA4P05014 189 aa10.15□□□□□ -0.78
SHKBP1-208ENST00000595726 F2RP25116 425 aa10.15□□□□□ -0.78
SHKBP1-208ENST00000595726 APOC4P55056 127 aa10.15□□□□□ -0.78
SHKBP1-208ENST00000595726 ZNF57Q68EA5 555 aaPredicted RBP10.15□□□□□ -0.78
SHKBP1-208ENST00000595726 SLC25A42Q86VD7 318 aa10.15□□□□□ -0.78
SHKBP1-208ENST00000595726 DGCR14Q96DF8 476 aaKnown RBP10.15□□□□□ -0.78
SHKBP1-208ENST00000595726 SLC2A9Q9NRM0 540 aa10.15□□□□□ -0.78
SHKBP1-208ENST00000595726 MTFP1Q9UDX5 166 aa10.15□□□□□ -0.78
SHKBP1-208ENST00000595726 UBQLN2Q9UHD9 624 aa10.15□□□□□ -0.78
SHKBP1-208ENST00000595726 APLNQ9ULZ1 77 aa10.15□□□□□ -0.78
SHKBP1-208ENST00000595726 ZNF257Q9Y2Q1 563 aa10.15□□□□□ -0.78
SHKBP1-208ENST00000595726 H3BMQ9 156 aa10.14□□□□□ -0.79
SHKBP1-208ENST00000595726 UPK2O00526 184 aa10.14□□□□□ -0.79
SHKBP1-208ENST00000595726 RTL8CO15255 209 aa10.14□□□□□ -0.79
SHKBP1-208ENST00000595726 CD3DP04234 171 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms