RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.4□□□□□ -1.06
SHKBP1-206ENST00000595523 DPPA5A6NC42 116 aa8.4□□□□□ -1.06
SHKBP1-206ENST00000595523 C15orf61A6NNL5 157 aa8.4□□□□□ -1.06
SHKBP1-206ENST00000595523 H0Y980 276 aa8.4□□□□□ -1.06
SHKBP1-206ENST00000595523 SAP30O75446 220 aa8.4□□□□□ -1.06
SHKBP1-206ENST00000595523 IGKV1-5P01602 117 aa8.4□□□□□ -1.06
SHKBP1-206ENST00000595523 CTSDP07339 412 aaPredicted RBP8.4□□□□□ -1.06
SHKBP1-206ENST00000595523 P0C879 139 aa8.4□□□□□ -1.06
SHKBP1-206ENST00000595523 AKAIN1P0CW23 69 aa8.4□□□□□ -1.06
SHKBP1-206ENST00000595523 ZP3P21754 424 aa8.4□□□□□ -1.06
SHKBP1-206ENST00000595523 S100GP29377 79 aa8.4□□□□□ -1.06
SHKBP1-206ENST00000595523 ECI1P42126 302 aa8.4□□□□□ -1.06
SHKBP1-206ENST00000595523 INSL3P51460 131 aa8.4□□□□□ -1.06
SHKBP1-206ENST00000595523 ZNF429Q86V71 674 aa8.4□□□□□ -1.06
SHKBP1-206ENST00000595523 TRIM63Q969Q1 353 aa8.4□□□□□ -1.06
SHKBP1-206ENST00000595523 CCDC140Q96MF4 163 aa8.4□□□□□ -1.06
SHKBP1-206ENST00000595523 PRR25Q96S07 402 aa8.4□□□□□ -1.06
SHKBP1-206ENST00000595523 SRSF8Q9BRL6 282 aaKnown RBP8.4□□□□□ -1.06
SHKBP1-206ENST00000595523 RTBDNQ9BSG5 229 aaPredicted RBP8.4□□□□□ -1.06
SHKBP1-206ENST00000595523 C5orf66Q9H5L9 145 aa8.4□□□□□ -1.06
SHKBP1-206ENST00000595523 TMEM14BQ9NUH8 114 aa8.4□□□□□ -1.06
SHKBP1-206ENST00000595523 OR51B2Q9Y5P1 312 aa8.4□□□□□ -1.06
SHKBP1-206ENST00000595523 S4R3C0 116 aa8.4□□□□□ -1.06
SHKBP1-206ENST00000595523 C3orf85A0A1B0GTC6 90 aa8.39□□□□□ -1.07
SHKBP1-206ENST00000595523 MFSD2BA6NFX1 497 aa8.39□□□□□ -1.07
SHKBP1-206ENST00000595523 PPP5D1E7EU14 171 aa8.39□□□□□ -1.07
SHKBP1-206ENST00000595523 IGHV3-23P01764 117 aa8.39□□□□□ -1.07
SHKBP1-206ENST00000595523 TRAPPC2P0DI81 140 aa8.39□□□□□ -1.07
SHKBP1-206ENST00000595523 TRAPPC2BP0DI82 140 aa8.39□□□□□ -1.07
SHKBP1-206ENST00000595523 MFAP2P55001 183 aa8.39□□□□□ -1.07
SHKBP1-206ENST00000595523 SYNJ2BPP57105 145 aa8.39□□□□□ -1.07
SHKBP1-206ENST00000595523 IZUMO4Q1ZYL8 232 aa8.39□□□□□ -1.07
SHKBP1-206ENST00000595523 SP6Q3SY56 376 aa8.39□□□□□ -1.07
SHKBP1-206ENST00000595523 CCDC190Q86UF4 302 aa8.39□□□□□ -1.07
SHKBP1-206ENST00000595523 HAPLN4Q86UW8 402 aa8.39□□□□□ -1.07
SHKBP1-206ENST00000595523 OR51S1Q8NGJ8 323 aa8.39□□□□□ -1.07
SHKBP1-206ENST00000595523 OR1L8Q8NGR8 309 aa8.39□□□□□ -1.07
SHKBP1-206ENST00000595523 ZFAND1Q8TCF1 268 aa8.39□□□□□ -1.07
SHKBP1-206ENST00000595523 THAP7Q9BT49 309 aaPredicted RBP8.39□□□□□ -1.07
SHKBP1-206ENST00000595523 SLC2A8Q9NY64 477 aa8.39□□□□□ -1.07
SHKBP1-206ENST00000595523 DISC1C4P0D8 188 aa8.38□□□□□ -1.07
SHKBP1-206ENST00000595523 SNAPC5O75971 98 aa8.38□□□□□ -1.07
SHKBP1-206ENST00000595523 HLA-AP01891 365 aaKnown RBP8.38□□□□□ -1.07
SHKBP1-206ENST00000595523 SERPINE2P07093 398 aa8.38□□□□□ -1.07
SHKBP1-206ENST00000595523 OR13C7P0DN81 318 aa8.38□□□□□ -1.07
SHKBP1-206ENST00000595523 HIST1H1BP16401 226 aaKnown RBP8.38□□□□□ -1.07
SHKBP1-206ENST00000595523 UCP1P25874 307 aa8.38□□□□□ -1.07
SHKBP1-206ENST00000595523 KLF9Q13886 244 aaPredicted RBP8.38□□□□□ -1.07
SHKBP1-206ENST00000595523 SURF2Q15527 256 aaPredicted RBP8.38□□□□□ -1.07
SHKBP1-206ENST00000595523 THOC7Q6I9Y2 204 aaKnown RBP8.38□□□□□ -1.07
SHKBP1-206ENST00000595523 GDPD1Q8N9F7 314 aa8.38□□□□□ -1.07
SHKBP1-206ENST00000595523 OR9G4Q8NGQ1 327 aa8.38□□□□□ -1.07
SHKBP1-206ENST00000595523 OR5B3Q8NH48 314 aa8.38□□□□□ -1.07
SHKBP1-206ENST00000595523 LSM10Q969L4 123 aaKnown RBP8.38□□□□□ -1.07
SHKBP1-206ENST00000595523 HINT2Q9BX68 163 aa8.38□□□□□ -1.07
SHKBP1-206ENST00000595523 COPZ2Q9P299 210 aa8.38□□□□□ -1.07
SHKBP1-206ENST00000595523 PRNDQ9UKY0 176 aa8.38□□□□□ -1.07
SHKBP1-206ENST00000595523 GPR132Q9UNW8 380 aa8.38□□□□□ -1.07
SHKBP1-206ENST00000595523 ZNF256Q9Y2P7 627 aaPredicted RBP8.38□□□□□ -1.07
SHKBP1-206ENST00000595523 LSM4Q9Y4Z0 139 aaKnown RBP8.38□□□□□ -1.07
SHKBP1-206ENST00000595523 A0A0G2JRQ6 117 aa8.37□□□□□ -1.07
SHKBP1-206ENST00000595523 DHFRP00374 187 aa8.37□□□□□ -1.07
SHKBP1-206ENST00000595523 IGLV1-51P01701 117 aa8.37□□□□□ -1.07
SHKBP1-206ENST00000595523 OR5AC1P0C628 307 aa8.37□□□□□ -1.07
SHKBP1-206ENST00000595523 DEFA4P12838 97 aa8.37□□□□□ -1.07
SHKBP1-206ENST00000595523 SPNP16150 400 aa8.37□□□□□ -1.07
SHKBP1-206ENST00000595523 ETV6P41212 452 aa8.37□□□□□ -1.07
SHKBP1-206ENST00000595523 RPEL1Q2QD12 228 aa8.37□□□□□ -1.07
SHKBP1-206ENST00000595523 DEFB121Q5J5C9 76 aa8.37□□□□□ -1.07
SHKBP1-206ENST00000595523 ADAMTSL5Q6ZMM2 481 aa8.37□□□□□ -1.07
SHKBP1-206ENST00000595523 H2BFWTQ7Z2G1 175 aa8.37□□□□□ -1.07
SHKBP1-206ENST00000595523 CCDC71LQ8N9Z2 235 aa8.37□□□□□ -1.07
SHKBP1-206ENST00000595523 LHFPL5Q8TAF8 219 aa8.37□□□□□ -1.07
SHKBP1-206ENST00000595523 GLYATL2Q8WU03 294 aa8.37□□□□□ -1.07
SHKBP1-206ENST00000595523 TMEM230Q96A57 120 aa8.37□□□□□ -1.07
SHKBP1-206ENST00000595523 TSC22D3Q99576 134 aa8.37□□□□□ -1.07
SHKBP1-206ENST00000595523 PRRT1Q99946 306 aa8.37□□□□□ -1.07
SHKBP1-206ENST00000595523 TMEM222Q9H0R3 208 aa8.37□□□□□ -1.07
SHKBP1-206ENST00000595523 ZMAT5Q9UDW3 170 aaKnown RBP8.37□□□□□ -1.07
SHKBP1-206ENST00000595523 A0A0B4J293 547 aa8.36□□□□□ -1.07
SHKBP1-206ENST00000595523 CRYM-AS1A6NIL9 109 aa8.36□□□□□ -1.07
SHKBP1-206ENST00000595523 CSN3P07498 182 aa8.36□□□□□ -1.07
SHKBP1-206ENST00000595523 EDN2P20800 178 aa8.36□□□□□ -1.07
SHKBP1-206ENST00000595523 S100A5P33763 92 aa8.36□□□□□ -1.07
SHKBP1-206ENST00000595523 PRCDQ00LT1 54 aa8.36□□□□□ -1.07
SHKBP1-206ENST00000595523 PYDC2Q56P42 97 aa8.36□□□□□ -1.07
SHKBP1-206ENST00000595523 CLEC19AQ6UXS0 136 aa8.36□□□□□ -1.07
SHKBP1-206ENST00000595523 HSD17B13Q7Z5P4 300 aaPredicted RBP8.36□□□□□ -1.07
SHKBP1-206ENST00000595523 Q8N402 240 aa8.36□□□□□ -1.07
SHKBP1-206ENST00000595523 OR6Q1Q8NGQ2 317 aa8.36□□□□□ -1.07
SHKBP1-206ENST00000595523 ZNF502Q8TBZ5 544 aa8.36□□□□□ -1.07
SHKBP1-206ENST00000595523 EEF1AKMT3Q96AZ1 226 aa8.36□□□□□ -1.07
SHKBP1-206ENST00000595523 OR4C12Q96R67 309 aa8.36□□□□□ -1.07
SHKBP1-206ENST00000595523 ELOVL1Q9BW60 279 aa8.36□□□□□ -1.07
SHKBP1-206ENST00000595523 NAA60Q9H7X0 242 aa8.36□□□□□ -1.07
SHKBP1-206ENST00000595523 FKBP11Q9NYL4 201 aa8.36□□□□□ -1.07
SHKBP1-206ENST00000595523 C14orf166Q9Y224 244 aaKnown RBP8.36□□□□□ -1.07
SHKBP1-206ENST00000595523 F11RQ9Y624 299 aaKnown RBP8.36□□□□□ -1.07
SHKBP1-206ENST00000595523 NBEAL2Q6ZNJ1 2754 aa8.36□□□□□ -1.07
SHKBP1-206ENST00000595523 GGCTO75223 188 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms