RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 DUX3Q96PT4 197 aa17.79■□□□□ 0.44
PNKP-205ENST00000595081 HINT2Q9BX68 163 aa17.79■□□□□ 0.44
PNKP-205ENST00000595081 SLA2Q9H6Q3 261 aa17.79■□□□□ 0.44
PNKP-205ENST00000595081 TBC1D24Q9ULP9 559 aa17.79■□□□□ 0.44
PNKP-205ENST00000595081 TMEM56-RWDD3S4R434 201 aa17.79■□□□□ 0.44
PNKP-205ENST00000595081 IGLC7A0M8Q6 106 aa17.78■□□□□ 0.44
PNKP-205ENST00000595081 H3BUA1 57 aa17.78■□□□□ 0.44
PNKP-205ENST00000595081 TRAPPC2P0DI81 140 aa17.78■□□□□ 0.44
PNKP-205ENST00000595081 TRAPPC2BP0DI82 140 aa17.78■□□□□ 0.44
PNKP-205ENST00000595081 VAMP1P23763 118 aa17.78■□□□□ 0.44
PNKP-205ENST00000595081 PPP1R1AQ13522 171 aa17.78■□□□□ 0.44
PNKP-205ENST00000595081 SLC25A42Q86VD7 318 aa17.78■□□□□ 0.44
PNKP-205ENST00000595081 C4orf3Q8WVX3 66 aa17.78■□□□□ 0.44
PNKP-205ENST00000595081 A0A0B4J293 547 aa17.77■□□□□ 0.44
PNKP-205ENST00000595081 NPIPB5A8MRT5 1133 aa17.77■□□□□ 0.44
PNKP-205ENST00000595081 RBMXL2O75526 392 aaKnown RBP17.77■□□□□ 0.44
PNKP-205ENST00000595081 IGHV3-11P01762 117 aa17.77■□□□□ 0.44
PNKP-205ENST00000595081 ANXA3P12429 323 aa17.77■□□□□ 0.44
PNKP-205ENST00000595081 IFITM3Q01628 133 aa17.77■□□□□ 0.44
PNKP-205ENST00000595081 ETV3LQ6ZN32 361 aa17.77■□□□□ 0.44
PNKP-205ENST00000595081 NDUFA4L2Q9NRX3 87 aa17.77■□□□□ 0.44
PNKP-205ENST00000595081 FKBP11Q9NYL4 201 aa17.77■□□□□ 0.44
PNKP-205ENST00000595081 ZNF257Q9Y2Q1 563 aa17.77■□□□□ 0.44
PNKP-205ENST00000595081 PF4P02776 101 aa17.76■□□□□ 0.43
PNKP-205ENST00000595081 PSMB6P28072 239 aa17.76■□□□□ 0.43
PNKP-205ENST00000595081 SLC35G3Q8N808 338 aa17.76■□□□□ 0.43
PNKP-205ENST00000595081 OR5B3Q8NH48 314 aa17.76■□□□□ 0.43
PNKP-205ENST00000595081 RAX2Q96IS3 184 aa17.76■□□□□ 0.43
PNKP-205ENST00000595081 ALX4Q9H161 411 aaPredicted RBP17.76■□□□□ 0.43
PNKP-205ENST00000595081 BRI3O95415 125 aa17.75■□□□□ 0.43
PNKP-205ENST00000595081 CTRB1P17538 263 aa17.75■□□□□ 0.43
PNKP-205ENST00000595081 ANXA7P20073 488 aaKnown RBP17.75■□□□□ 0.43
PNKP-205ENST00000595081 SLC6A1P30531 599 aa17.75■□□□□ 0.43
PNKP-205ENST00000595081 WT1-ASQ06250 92 aa17.75■□□□□ 0.43
PNKP-205ENST00000595081 ASAH1Q13510 395 aa17.75■□□□□ 0.43
PNKP-205ENST00000595081 CTRB2Q6GPI1 263 aa17.75■□□□□ 0.43
PNKP-205ENST00000595081 Q6ZRM9 215 aa17.75■□□□□ 0.43
PNKP-205ENST00000595081 IL22RA2Q969J5 263 aa17.75■□□□□ 0.43
PNKP-205ENST00000595081 SRSF8Q9BRL6 282 aaKnown RBP17.75■□□□□ 0.43
PNKP-205ENST00000595081 I3L521 148 aa17.74■□□□□ 0.43
PNKP-205ENST00000595081 SFT2D2O95562 160 aa17.74■□□□□ 0.43
PNKP-205ENST00000595081 CRYGCP07315 174 aa17.74■□□□□ 0.43
PNKP-205ENST00000595081 OR13C7P0DN81 318 aa17.74■□□□□ 0.43
PNKP-205ENST00000595081 RHOGP84095 191 aa17.74■□□□□ 0.43
PNKP-205ENST00000595081 ANKRD55Q3KP44 614 aa17.74■□□□□ 0.43
PNKP-205ENST00000595081 LYZL2Q7Z4W2 148 aa17.74■□□□□ 0.43
PNKP-205ENST00000595081 FAM219AQ8IW50 185 aa17.74■□□□□ 0.43
PNKP-205ENST00000595081 LGI3Q8N145 548 aa17.74■□□□□ 0.43
PNKP-205ENST00000595081 GPR146Q96CH1 333 aa17.74■□□□□ 0.43
PNKP-205ENST00000595081 C20orf85Q9H1P6 137 aa17.74■□□□□ 0.43
PNKP-205ENST00000595081 CCL24O00175 119 aa17.73■□□□□ 0.43
PNKP-205ENST00000595081 ST8SIA3O43173 380 aa17.73■□□□□ 0.43
PNKP-205ENST00000595081 UBE2MP61081 183 aaKnown RBP17.73■□□□□ 0.43
PNKP-205ENST00000595081 HSPE1P61604 102 aaKnown RBP17.73■□□□□ 0.43
PNKP-205ENST00000595081 SRPXP78539 464 aa17.73■□□□□ 0.43
PNKP-205ENST00000595081 SPINK9Q5DT21 86 aa17.73■□□□□ 0.43
PNKP-205ENST00000595081 THOC7Q6I9Y2 204 aaKnown RBP17.73■□□□□ 0.43
PNKP-205ENST00000595081 ZNF429Q86V71 674 aa17.73■□□□□ 0.43
PNKP-205ENST00000595081 LSM10Q969L4 123 aaKnown RBP17.73■□□□□ 0.43
PNKP-205ENST00000595081 CACNG5Q9UF02 275 aa17.73■□□□□ 0.43
PNKP-205ENST00000595081 NBEAL1Q6ZS30 2694 aa17.72■□□□□ 0.43
PNKP-205ENST00000595081 TRBV9A0A0B4J1U6 114 aa17.72■□□□□ 0.43
PNKP-205ENST00000595081 C13orf42A0A1B0GVH6 325 aa17.72■□□□□ 0.43
PNKP-205ENST00000595081 OR2J3O76001 311 aa17.72■□□□□ 0.43
PNKP-205ENST00000595081 TCRBP04435 133 aa17.72■□□□□ 0.43
PNKP-205ENST00000595081 LGALS1P09382 135 aaKnown RBP17.72■□□□□ 0.43
PNKP-205ENST00000595081 DEFA4P12838 97 aa17.72■□□□□ 0.43
PNKP-205ENST00000595081 MECP2P51608 486 aaKnown RBP17.72■□□□□ 0.43
PNKP-205ENST00000595081 RUNX1Q01196 453 aa17.72■□□□□ 0.43
PNKP-205ENST00000595081 MZT2BQ6NZ67 158 aa17.72■□□□□ 0.43
PNKP-205ENST00000595081 FANCD2OSQ96PS1 177 aa17.72■□□□□ 0.43
PNKP-205ENST00000595081 P2RX4Q99571 388 aa17.72■□□□□ 0.43
PNKP-205ENST00000595081 TRAV6A0A075B6T7 132 aa17.71■□□□□ 0.43
PNKP-205ENST00000595081 A0A0B4J2A0 478 aa17.71■□□□□ 0.43
PNKP-205ENST00000595081 A0A0G2JLM5 398 aa17.71■□□□□ 0.43
PNKP-205ENST00000595081 FAM240BA0A1B0GVZ2 78 aa17.71■□□□□ 0.43
PNKP-205ENST00000595081 C9orf170A2RU37 121 aa17.71■□□□□ 0.43
PNKP-205ENST00000595081 HLA-AP01891 365 aaKnown RBP17.71■□□□□ 0.43
PNKP-205ENST00000595081 MYCNOSP40205 109 aa17.71■□□□□ 0.43
PNKP-205ENST00000595081 PRCDQ00LT1 54 aa17.71■□□□□ 0.43
PNKP-205ENST00000595081 HSD17B13Q7Z5P4 300 aaPredicted RBP17.71■□□□□ 0.43
PNKP-205ENST00000595081 MRPL41Q8IXM3 137 aaKnown RBP17.71■□□□□ 0.43
PNKP-205ENST00000595081 OR11H1Q8NG94 326 aa17.71■□□□□ 0.43
PNKP-205ENST00000595081 NUDT15Q9NV35 164 aa17.71■□□□□ 0.43
PNKP-205ENST00000595081 SHPKQ9UHJ6 478 aa17.71■□□□□ 0.43
PNKP-205ENST00000595081 FAM223BA6NKX1 122 aa17.7■□□□□ 0.42
PNKP-205ENST00000595081 DHFRP00374 187 aa17.7■□□□□ 0.42
PNKP-205ENST00000595081 IFNA17P01571 189 aa17.7■□□□□ 0.42
PNKP-205ENST00000595081 OR4E1P0C645 316 aa17.7■□□□□ 0.42
PNKP-205ENST00000595081 DHRS2Q13268 280 aa17.7■□□□□ 0.42
PNKP-205ENST00000595081 C4orf46Q504U0 113 aa17.7■□□□□ 0.42
PNKP-205ENST00000595081 NMSQ5H8A3 153 aa17.7■□□□□ 0.42
PNKP-205ENST00000595081 FAM223AQ8IWN6 122 aa17.7■□□□□ 0.42
PNKP-205ENST00000595081 LINC00482Q8N8I6 264 aa17.7■□□□□ 0.42
PNKP-205ENST00000595081 OR1N2Q8NGR9 330 aa17.7■□□□□ 0.42
PNKP-205ENST00000595081 USMG5Q96IX5 58 aa17.7■□□□□ 0.42
PNKP-205ENST00000595081 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.7■□□□□ 0.42
PNKP-205ENST00000595081 DMRT1Q9Y5R6 373 aa17.7■□□□□ 0.42
PNKP-205ENST00000595081 IGLV11-55A0A075B6I3 123 aa17.69■□□□□ 0.42
PNKP-205ENST00000595081 RAB25P57735 213 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms