RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 SMIM15Q7Z3B0 74 aa14.12□□□□□ -0.15
SHKBP1-205ENST00000594973 C5orf30Q96GV9 206 aa14.12□□□□□ -0.15
SHKBP1-205ENST00000594973 ALKBH7Q9BT30 221 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-205ENST00000594973 GCM1Q9NP62 436 aa14.12□□□□□ -0.15
SHKBP1-205ENST00000594973 ATRXP46100 2492 aa14.11□□□□□ -0.15
SHKBP1-205ENST00000594973 DPRXA6NFQ7 191 aa14.11□□□□□ -0.15
SHKBP1-205ENST00000594973 RAMP3O60896 148 aa14.11□□□□□ -0.15
SHKBP1-205ENST00000594973 CFHR2P36980 270 aa14.11□□□□□ -0.15
SHKBP1-205ENST00000594973 CTRLP40313 264 aa14.11□□□□□ -0.15
SHKBP1-205ENST00000594973 COMPP49747 757 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-205ENST00000594973 BSPH1Q075Z2 132 aa14.11□□□□□ -0.15
SHKBP1-205ENST00000594973 MSMO1Q15800 293 aa14.11□□□□□ -0.15
SHKBP1-205ENST00000594973 OR8G2PQ6IF36 304 aa14.11□□□□□ -0.15
SHKBP1-205ENST00000594973 LINC01551Q86U37 167 aa14.11□□□□□ -0.15
SHKBP1-205ENST00000594973 NEIL1Q96FI4 390 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-205ENST00000594973 RNF2Q99496 336 aa14.11□□□□□ -0.15
SHKBP1-205ENST00000594973 WDR61Q9GZS3 305 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-205ENST00000594973 ODAMA1E959 279 aa14.1□□□□□ -0.15
SHKBP1-205ENST00000594973 KIAA1324LA8MWY0 1029 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-205ENST00000594973 H3BP45 60 aa14.1□□□□□ -0.15
SHKBP1-205ENST00000594973 SPINT2O43291 252 aa14.1□□□□□ -0.15
SHKBP1-205ENST00000594973 LHBP01229 141 aa14.1□□□□□ -0.15
SHKBP1-205ENST00000594973 THBDP07204 575 aa14.1□□□□□ -0.15
SHKBP1-205ENST00000594973 ADMP35318 185 aa14.1□□□□□ -0.15
SHKBP1-205ENST00000594973 MORN2Q502X0 79 aa14.1□□□□□ -0.15
SHKBP1-205ENST00000594973 DEFB108BQ8NET1 73 aa14.1□□□□□ -0.15
SHKBP1-205ENST00000594973 OR4F5Q8NH21 305 aa14.1□□□□□ -0.15
SHKBP1-205ENST00000594973 OR4F4Q96R69 305 aa14.1□□□□□ -0.15
SHKBP1-205ENST00000594973 LAMTOR2Q9Y2Q5 125 aa14.1□□□□□ -0.15
SHKBP1-205ENST00000594973 F6UZH7 168 aa14.1□□□□□ -0.15
SHKBP1-205ENST00000594973 IGHV3-7P01780 117 aa14.1□□□□□ -0.15
SHKBP1-205ENST00000594973 CDKN1AP38936 164 aa14.1□□□□□ -0.15
SHKBP1-205ENST00000594973 RPL30P62888 115 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-205ENST00000594973 ETFRF1Q6IPR1 90 aa14.1□□□□□ -0.15
SHKBP1-205ENST00000594973 TP53TG3Q9ULZ0 132 aa14.1□□□□□ -0.15
SHKBP1-205ENST00000594973 PSG11Q9UQ72 335 aa14.1□□□□□ -0.15
SHKBP1-205ENST00000594973 NBASA2RRP1 2371 aa14.1□□□□□ -0.15
SHKBP1-205ENST00000594973 USF3Q68DE3 2245 aa14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 CTXND1A0A1B0GTU2 59 aa14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 TMPRSS2O15393 492 aa14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 CD33P20138 364 aa14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 LINC00205P59089 165 aa14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 RBPJQ06330 500 aa14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 FAM90A1Q86YD7 464 aa14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 LYG1Q8N1E2 194 aa14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 ZCCHC24Q8N2G6 241 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 RPP25LQ8N5L8 163 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 ZNF738Q8NE65 137 aa14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 SLC24A4Q8NFF2 622 aa14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 IL19Q9UHD0 177 aa14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 RNF212BA8MTL3 300 aa14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 C15orf65H3BRN8 121 aa14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 MGST3O14880 152 aa14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 WNT2P09544 360 aa14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 UBE2G2P60604 165 aa14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 CCL8P80075 99 aa14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 ZNF816Q0VGE8 651 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 DUX4L9Q6RFH8 374 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 NUP37Q8NFH4 326 aa14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 CHODLQ9H9P2 273 aa14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 PATZ1Q9HBE1 687 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 JKAMPQ9P055 326 aa14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 RNF7Q9UBF6 113 aa14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 PKDREJQ9NTG1 2253 aa14.09□□□□□ -0.15
SHKBP1-205ENST00000594973 TRGV8A0A0C4DH27 118 aa14.08□□□□□ -0.16
SHKBP1-205ENST00000594973 TNFSF4P23510 183 aa14.08□□□□□ -0.16
SHKBP1-205ENST00000594973 GATA4P43694 442 aa14.08□□□□□ -0.16
SHKBP1-205ENST00000594973 LINC00310P59036 64 aa14.08□□□□□ -0.16
SHKBP1-205ENST00000594973 FGFRL1Q8N441 504 aa14.08□□□□□ -0.16
SHKBP1-205ENST00000594973 PPP1R35Q8TAP8 253 aa14.08□□□□□ -0.16
SHKBP1-205ENST00000594973 RND1Q92730 232 aa14.08□□□□□ -0.16
SHKBP1-205ENST00000594973 TAF15Q92804 592 aaKnown RBP eCLIP14.08□□□□□ -0.16
SHKBP1-205ENST00000594973 LSM10Q969L4 123 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-205ENST00000594973 GNG12Q9UBI6 72 aa14.08□□□□□ -0.16
SHKBP1-205ENST00000594973 COX11Q9Y6N1 276 aa14.08□□□□□ -0.16
SHKBP1-205ENST00000594973 TRAV9-1A0A075B6T8 112 aa14.08□□□□□ -0.16
SHKBP1-205ENST00000594973 LOC105371242A0A075B767 164 aa14.08□□□□□ -0.16
SHKBP1-205ENST00000594973 KRASP01116 189 aa14.08□□□□□ -0.16
SHKBP1-205ENST00000594973 SUMO1P63165 101 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-205ENST00000594973 ARL16Q0P5N6 197 aa14.08□□□□□ -0.16
SHKBP1-205ENST00000594973 HSPB7Q9UBY9 170 aa14.08□□□□□ -0.16
SHKBP1-205ENST00000594973 NCOR2Q9Y618 2525 aa14.07□□□□□ -0.16
SHKBP1-205ENST00000594973 SERF1AO75920 110 aa14.07□□□□□ -0.16
SHKBP1-205ENST00000594973 IAPPP10997 89 aa14.07□□□□□ -0.16
SHKBP1-205ENST00000594973 Q0VG73 95 aa14.07□□□□□ -0.16
SHKBP1-205ENST00000594973 ADIPOQQ15848 244 aa14.07□□□□□ -0.16
SHKBP1-205ENST00000594973 OR1L6Q8NGR2 347 aa14.07□□□□□ -0.16
SHKBP1-205ENST00000594973 PSENENQ9NZ42 101 aa14.07□□□□□ -0.16
SHKBP1-205ENST00000594973 IGLC2P0DOY2 106 aa14.07□□□□□ -0.16
SHKBP1-205ENST00000594973 IGLC3P0DOY3 106 aa14.07□□□□□ -0.16
SHKBP1-205ENST00000594973 CRISP2P16562 243 aa14.07□□□□□ -0.16
SHKBP1-205ENST00000594973 G6PCP35575 357 aa14.07□□□□□ -0.16
SHKBP1-205ENST00000594973 HNRNPA3P51991 378 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-205ENST00000594973 ZBTB34Q8NCN2 500 aa14.07□□□□□ -0.16
SHKBP1-205ENST00000594973 CHTOPQ9Y3Y2 248 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-205ENST00000594973 IGHV2-70DA0A0C4DH43 119 aa14.06□□□□□ -0.16
SHKBP1-205ENST00000594973 C17orf98A8MV24 154 aa14.06□□□□□ -0.16
SHKBP1-205ENST00000594973 SYNGR2O43760 224 aa14.06□□□□□ -0.16
SHKBP1-205ENST00000594973 CLDN1O95832 211 aa14.06□□□□□ -0.16
SHKBP1-205ENST00000594973 ADH4P08319 380 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms