RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 CIARTQ8N365 385 aaPredicted RBP12.16□□□□□ -0.46
VRK3-207ENST00000594092 LILRB2Q8N423 598 aa12.16□□□□□ -0.46
VRK3-207ENST00000594092 HSD17B11Q8NBQ5 300 aa12.16□□□□□ -0.46
VRK3-207ENST00000594092 ENY2Q9NPA8 101 aa12.16□□□□□ -0.46
VRK3-207ENST00000594092 HEYLQ9NQ87 328 aaPredicted RBP12.16□□□□□ -0.46
VRK3-207ENST00000594092 AKAP9Q99996 3911 aa12.15□□□□□ -0.46
VRK3-207ENST00000594092 TEX50A0A1B0GTY4 177 aa12.15□□□□□ -0.46
VRK3-207ENST00000594092 IFNA5P01569 189 aa12.15□□□□□ -0.46
VRK3-207ENST00000594092 SEC11BP0C7V7 166 aa12.15□□□□□ -0.46
VRK3-207ENST00000594092 SPP1P10451 314 aa12.15□□□□□ -0.46
VRK3-207ENST00000594092 F2RL1P55085 397 aa12.15□□□□□ -0.46
VRK3-207ENST00000594092 EBI3Q14213 229 aa12.15□□□□□ -0.46
VRK3-207ENST00000594092 HES1Q14469 280 aa12.15□□□□□ -0.46
VRK3-207ENST00000594092 OR2T10Q8NGZ9 312 aa12.15□□□□□ -0.46
VRK3-207ENST00000594092 METTL1Q9UBP6 276 aaKnown RBP12.15□□□□□ -0.46
VRK3-207ENST00000594092 SIGLEC9Q9Y336 463 aa12.15□□□□□ -0.46
VRK3-207ENST00000594092 VDAC2P45880 294 aaPredicted RBP12.14□□□□□ -0.47
VRK3-207ENST00000594092 SLC38A11Q08AI6 406 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 ARL16Q0P5N6 197 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 PJVKQ0ZLH3 352 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 MMDQ15546 238 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 FAM120AOSQ5T036 256 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 CYB5R2Q6BCY4 276 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 OR8G2PQ6IF36 304 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 SLC25A24Q6NUK1 477 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 HAPLN4Q86UW8 402 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 COMMD7Q86VX2 200 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 OR10P1Q8NGE3 313 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 OR5B3Q8NH48 314 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 CXorf58Q96LI9 332 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 PFDN2Q9UHV9 154 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 ABCA1O95477 2261 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 ZNF469Q96JG9 3925 aaPredicted RBP12.14□□□□□ -0.47
VRK3-207ENST00000594092 A0A0U1RQK1 487 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 RRHO14718 337 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 FGF16O43320 207 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 IFNA10P01566 189 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 OPN1MWP04001 364 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 OPN1MW2P0DN77 364 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 OPN1MW3P0DN78 364 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 S100A1P23297 94 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 BRS3P32247 399 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 PRCDQ00LT1 54 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 PRSS8Q16651 343 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 THNSL2Q86YJ6 484 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 Q8N6K4 173 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 NPBQ8NG41 125 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 PINX1Q96BK5 328 aaKnown RBP12.14□□□□□ -0.47
VRK3-207ENST00000594092 HINT2Q9BX68 163 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 COMMD5Q9GZQ3 224 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 FBXL15Q9H469 300 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 PLEKHA3Q9HB20 300 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 MED9Q9NWA0 146 aa12.14□□□□□ -0.47
VRK3-207ENST00000594092 C15orf62A8K5M9 175 aa12.13□□□□□ -0.47
VRK3-207ENST00000594092 NBR2O15453 112 aa12.13□□□□□ -0.47
VRK3-207ENST00000594092 NDUFA3O95167 84 aa12.13□□□□□ -0.47
VRK3-207ENST00000594092 FAM157CP0CG43 387 aa12.13□□□□□ -0.47
VRK3-207ENST00000594092 SULT1A2P50226 295 aa12.13□□□□□ -0.47
VRK3-207ENST00000594092 ATP6V1FQ16864 119 aa12.13□□□□□ -0.47
VRK3-207ENST00000594092 PPP1R27Q86WC6 154 aa12.13□□□□□ -0.47
VRK3-207ENST00000594092 MMD2Q8IY49 270 aa12.13□□□□□ -0.47
VRK3-207ENST00000594092 OR1L8Q8NGR8 309 aa12.13□□□□□ -0.47
VRK3-207ENST00000594092 GNPNAT1Q96EK6 184 aaPredicted RBP12.13□□□□□ -0.47
VRK3-207ENST00000594092 CITED4Q96RK1 184 aa12.13□□□□□ -0.47
VRK3-207ENST00000594092 NDUFA4L2Q9NRX3 87 aa12.13□□□□□ -0.47
VRK3-207ENST00000594092 SOX21Q9Y651 276 aaPredicted RBP12.13□□□□□ -0.47
VRK3-207ENST00000594092 CSPG4Q6UVK1 2322 aa12.13□□□□□ -0.47
VRK3-207ENST00000594092 PMS2P5A8MQ11 134 aa12.12□□□□□ -0.47
VRK3-207ENST00000594092 ZNF705EA8MWA4 302 aaPredicted RBP12.12□□□□□ -0.47
VRK3-207ENST00000594092 SMAD7O15105 426 aaKnown RBP12.12□□□□□ -0.47
VRK3-207ENST00000594092 OR8U8P0C7N1 319 aa12.12□□□□□ -0.47
VRK3-207ENST00000594092 FAM106CPP0CH98 169 aa12.12□□□□□ -0.47
VRK3-207ENST00000594092 TMEM11P17152 192 aa12.12□□□□□ -0.47
VRK3-207ENST00000594092 ATP6V0CP27449 155 aa12.12□□□□□ -0.47
VRK3-207ENST00000594092 C10orf55Q5SWW7 151 aa12.12□□□□□ -0.47
VRK3-207ENST00000594092 SCGB1C1Q8TD33 95 aa12.12□□□□□ -0.47
VRK3-207ENST00000594092 MEGF9Q9H1U4 602 aa12.12□□□□□ -0.47
VRK3-207ENST00000594092 SH3BGRL3Q9H299 93 aa12.12□□□□□ -0.47
VRK3-207ENST00000594092 E7EUB6 86 aa12.11□□□□□ -0.47
VRK3-207ENST00000594092 PLXNB1O43157 2135 aa12.11□□□□□ -0.47
VRK3-207ENST00000594092 RAB11AP62491 216 aa12.11□□□□□ -0.47
VRK3-207ENST00000594092 SAT2Q96F10 170 aaPredicted RBP12.11□□□□□ -0.47
VRK3-207ENST00000594092 KIAA1456Q9P272 454 aa12.11□□□□□ -0.47
VRK3-207ENST00000594092 FAM96BQ9Y3D0 163 aa12.11□□□□□ -0.47
VRK3-207ENST00000594092 CGB1A6NKQ9 187 aa12.11□□□□□ -0.47
VRK3-207ENST00000594092 FCN1O00602 326 aa12.11□□□□□ -0.47
VRK3-207ENST00000594092 MAS1LP35410 378 aa12.11□□□□□ -0.47
VRK3-207ENST00000594092 PLGLAQ15195 96 aa12.11□□□□□ -0.47
VRK3-207ENST00000594092 SLC24A4Q8NFF2 622 aa12.11□□□□□ -0.47
VRK3-207ENST00000594092 TMEM147Q9BVK8 224 aa12.11□□□□□ -0.47
VRK3-207ENST00000594092 PARD6GQ9BYG4 376 aaPredicted RBP12.11□□□□□ -0.47
VRK3-207ENST00000594092 TEX15Q9BXT5 2789 aa12.1□□□□□ -0.47
VRK3-207ENST00000594092 FLNAP21333 2647 aaKnown RBP12.1□□□□□ -0.47
VRK3-207ENST00000594092 A0A1B0GW64 132 aa12.1□□□□□ -0.47
VRK3-207ENST00000594092 FSHBP01225 129 aa12.1□□□□□ -0.47
VRK3-207ENST00000594092 NPY1RP25929 384 aa12.1□□□□□ -0.47
VRK3-207ENST00000594092 RAB5CP51148 216 aa12.1□□□□□ -0.47
VRK3-207ENST00000594092 BLOC1S1P78537 153 aa12.1□□□□□ -0.47
VRK3-207ENST00000594092 TNXAQ16473 311 aa12.1□□□□□ -0.47
VRK3-207ENST00000594092 C5orf64Q2M2E5 130 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms