RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 OR5H2Q8NGV7 314 aa9.97□□□□□ -0.81
APOC1-209ENST00000592885 CACNG8Q8WXS5 425 aa9.97□□□□□ -0.81
APOC1-209ENST00000592885 LSM10Q969L4 123 aaKnown RBP9.97□□□□□ -0.81
APOC1-209ENST00000592885 ZNF2Q9BSG1 426 aaPredicted RBP9.97□□□□□ -0.81
APOC1-209ENST00000592885 ZNF436Q9C0F3 470 aaPredicted RBP9.97□□□□□ -0.81
APOC1-209ENST00000592885 FAM212BQ9NTI7 297 aaPredicted RBP9.97□□□□□ -0.81
APOC1-209ENST00000592885 MRPL27Q9P0M9 148 aaKnown RBP9.97□□□□□ -0.81
APOC1-209ENST00000592885 MLXQ9UH92 298 aa9.97□□□□□ -0.81
APOC1-209ENST00000592885 S4R3C0 116 aa9.97□□□□□ -0.81
APOC1-209ENST00000592885 TRAV3A0A0B4J244 114 aa9.96□□□□□ -0.82
APOC1-209ENST00000592885 MEIS3P1A6NDR6 274 aa9.96□□□□□ -0.82
APOC1-209ENST00000592885 TGOLN2O43493 480 aa9.96□□□□□ -0.82
APOC1-209ENST00000592885 PGLYRP1O75594 196 aaPredicted RBP9.96□□□□□ -0.82
APOC1-209ENST00000592885 RLN1P04808 185 aa9.96□□□□□ -0.82
APOC1-209ENST00000592885 FCER2P06734 321 aa9.96□□□□□ -0.82
APOC1-209ENST00000592885 SERPINE2P07093 398 aa9.96□□□□□ -0.82
APOC1-209ENST00000592885 TRAPPC2P0DI81 140 aa9.96□□□□□ -0.82
APOC1-209ENST00000592885 TRAPPC2BP0DI82 140 aa9.96□□□□□ -0.82
APOC1-209ENST00000592885 SPSB3Q6PJ21 355 aa9.96□□□□□ -0.82
APOC1-209ENST00000592885 PLET1Q6UQ28 207 aa9.96□□□□□ -0.82
APOC1-209ENST00000592885 SAMD12Q8N8I0 201 aa9.96□□□□□ -0.82
APOC1-209ENST00000592885 OR52B4Q8NGK2 314 aa9.96□□□□□ -0.82
APOC1-209ENST00000592885 OR1L6Q8NGR2 347 aa9.96□□□□□ -0.82
APOC1-209ENST00000592885 TMEM190Q8WZ59 177 aa9.96□□□□□ -0.82
APOC1-209ENST00000592885 BSCL2Q96G97 398 aaPredicted RBP9.96□□□□□ -0.82
APOC1-209ENST00000592885 WFDC10AQ9H1F0 79 aa9.96□□□□□ -0.82
APOC1-209ENST00000592885 RETNQ9HD89 108 aa9.96□□□□□ -0.82
APOC1-209ENST00000592885 GPR31O00270 319 aa9.95□□□□□ -0.82
APOC1-209ENST00000592885 JTBO76095 146 aa9.95□□□□□ -0.82
APOC1-209ENST00000592885 S100GP29377 79 aa9.95□□□□□ -0.82
APOC1-209ENST00000592885 PRSS3P35030 304 aa9.95□□□□□ -0.82
APOC1-209ENST00000592885 RPS19P39019 145 aaKnown RBP9.95□□□□□ -0.82
APOC1-209ENST00000592885 WT1-ASQ06250 92 aa9.95□□□□□ -0.82
APOC1-209ENST00000592885 LPCAT3Q6P1A2 487 aa9.95□□□□□ -0.82
APOC1-209ENST00000592885 BTNL8Q6UX41 500 aa9.95□□□□□ -0.82
APOC1-209ENST00000592885 UNQ9165/PRO28630Q6UXU0 137 aa9.95□□□□□ -0.82
APOC1-209ENST00000592885 TSPAN14Q8NG11 270 aa9.95□□□□□ -0.82
APOC1-209ENST00000592885 OR6F1Q8NGZ6 308 aa9.95□□□□□ -0.82
APOC1-209ENST00000592885 OR5B3Q8NH48 314 aa9.95□□□□□ -0.82
APOC1-209ENST00000592885 DGCR14Q96DF8 476 aaKnown RBP9.95□□□□□ -0.82
APOC1-209ENST00000592885 YIPF6Q96EC8 236 aa9.95□□□□□ -0.82
APOC1-209ENST00000592885 CMTM3Q96MX0 182 aa9.95□□□□□ -0.82
APOC1-209ENST00000592885 TSC22D3Q99576 134 aa9.95□□□□□ -0.82
APOC1-209ENST00000592885 SPAG8Q99932 426 aaPredicted RBP9.95□□□□□ -0.82
APOC1-209ENST00000592885 GGTLC1Q9BX51 225 aa9.95□□□□□ -0.82
APOC1-209ENST00000592885 FXYD6Q9H0Q3 95 aa9.95□□□□□ -0.82
APOC1-209ENST00000592885 C5orf66Q9H5L9 145 aa9.95□□□□□ -0.82
APOC1-209ENST00000592885 NDUFA4L2Q9NRX3 87 aa9.95□□□□□ -0.82
APOC1-209ENST00000592885 FKBP11Q9NYL4 201 aa9.95□□□□□ -0.82
APOC1-209ENST00000592885 PRNDQ9UKY0 176 aa9.95□□□□□ -0.82
APOC1-209ENST00000592885 F11RQ9Y624 299 aaKnown RBP9.95□□□□□ -0.82
APOC1-209ENST00000592885 A0A087WXM4 84 aa9.94□□□□□ -0.82
APOC1-209ENST00000592885 LOC102724200A0A096LPH7 203 aaPredicted RBP9.94□□□□□ -0.82
APOC1-209ENST00000592885 TEX50A0A1B0GTY4 177 aa9.94□□□□□ -0.82
APOC1-209ENST00000592885 SNAPC5O75971 98 aa9.94□□□□□ -0.82
APOC1-209ENST00000592885 TNFAIP8O95379 198 aa9.94□□□□□ -0.82
APOC1-209ENST00000592885 PMP2P02689 132 aa9.94□□□□□ -0.82
APOC1-209ENST00000592885 OR13C7P0DN81 318 aa9.94□□□□□ -0.82
APOC1-209ENST00000592885 RFX2P48378 723 aa9.94□□□□□ -0.82
APOC1-209ENST00000592885 TM4SF20Q53R12 229 aa9.94□□□□□ -0.82
APOC1-209ENST00000592885 RBPMS2Q6ZRY4 209 aaKnown RBP9.94□□□□□ -0.82
APOC1-209ENST00000592885 SLC38A6Q8IZM9 456 aa9.94□□□□□ -0.82
APOC1-209ENST00000592885 OR10W1Q8NGF6 305 aa9.94□□□□□ -0.82
APOC1-209ENST00000592885 SLC25A46Q96AG3 418 aa9.94□□□□□ -0.82
APOC1-209ENST00000592885 TMEM56Q96MV1 263 aa9.94□□□□□ -0.82
APOC1-209ENST00000592885 FAM110AQ9BQ89 295 aa9.94□□□□□ -0.82
APOC1-209ENST00000592885 SCPEP1Q9HB40 452 aa9.94□□□□□ -0.82
APOC1-209ENST00000592885 DAZ1Q9NQZ3 744 aaKnown RBP9.94□□□□□ -0.82
APOC1-209ENST00000592885 NDUFA4O00483 81 aa9.93□□□□□ -0.82
APOC1-209ENST00000592885 SCAF4O95104 1147 aaKnown RBP9.93□□□□□ -0.82
APOC1-209ENST00000592885 HRH1P35367 487 aa9.93□□□□□ -0.82
APOC1-209ENST00000592885 TGFBR1P36897 503 aa9.93□□□□□ -0.82
APOC1-209ENST00000592885 LPAR6P43657 344 aa9.93□□□□□ -0.82
APOC1-209ENST00000592885 ZNF585BQ52M93 769 aa9.93□□□□□ -0.82
APOC1-209ENST00000592885 OR2C3Q8N628 320 aa9.93□□□□□ -0.82
APOC1-209ENST00000592885 GPX8Q8TED1 209 aa9.93□□□□□ -0.82
APOC1-209ENST00000592885 FCAMRQ8WWV6 532 aa9.93□□□□□ -0.82
APOC1-209ENST00000592885 GAR1Q9NY12 217 aaKnown RBP9.93□□□□□ -0.82
APOC1-209ENST00000592885 C21orf62Q9NYP8 219 aa9.93□□□□□ -0.82
APOC1-209ENST00000592885 OR51B2Q9Y5P1 312 aa9.93□□□□□ -0.82
APOC1-209ENST00000592885 SACSQ9NZJ4 4579 aa9.92□□□□□ -0.82
APOC1-209ENST00000592885 C15orf61A6NNL5 157 aa9.92□□□□□ -0.82
APOC1-209ENST00000592885 TSPAN4O14817 238 aa9.92□□□□□ -0.82
APOC1-209ENST00000592885 KRASP01116 189 aa9.92□□□□□ -0.82
APOC1-209ENST00000592885 APOA1P02647 267 aa9.92□□□□□ -0.82
APOC1-209ENST00000592885 RCVRNP35243 200 aa9.92□□□□□ -0.82
APOC1-209ENST00000592885 LAMTOR1Q6IAA8 161 aa9.92□□□□□ -0.82
APOC1-209ENST00000592885 SLC25A24Q6NUK1 477 aa9.92□□□□□ -0.82
APOC1-209ENST00000592885 TMEM14BQ9NUH8 114 aa9.92□□□□□ -0.82
APOC1-209ENST00000592885 SMIM31A0A1B0GVY4 71 aa9.91□□□□□ -0.82
APOC1-209ENST00000592885 OR2T8A6NH00 312 aa9.91□□□□□ -0.82
APOC1-209ENST00000592885 K7EMT4 169 aa9.91□□□□□ -0.82
APOC1-209ENST00000592885 EIF4EP06730 217 aaKnown RBP9.91□□□□□ -0.82
APOC1-209ENST00000592885 RPA2P15927 270 aa9.91□□□□□ -0.82
APOC1-209ENST00000592885 G6PCP35575 357 aa9.91□□□□□ -0.82
APOC1-209ENST00000592885 APOC4P55056 127 aa9.91□□□□□ -0.82
APOC1-209ENST00000592885 LSM3P62310 102 aaKnown RBP9.91□□□□□ -0.82
APOC1-209ENST00000592885 LYSMD2Q8IV50 215 aa9.91□□□□□ -0.82
APOC1-209ENST00000592885 ZNF114Q8NC26 417 aa9.91□□□□□ -0.82
APOC1-209ENST00000592885 OR1P1Q8NH06 330 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms