RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 ATP5IP56385 69 aaPredicted RBP13.52□□□□□ -0.24
PRKCSH-217ENST00000592741 RHOBP62745 196 aa13.52□□□□□ -0.24
PRKCSH-217ENST00000592741 GNB1P62873 340 aa13.52□□□□□ -0.24
PRKCSH-217ENST00000592741 NECAP1Q8NC96 275 aa13.52□□□□□ -0.24
PRKCSH-217ENST00000592741 OR5B3Q8NH48 314 aa13.52□□□□□ -0.24
PRKCSH-217ENST00000592741 ABHD5Q8WTS1 349 aa13.52□□□□□ -0.24
PRKCSH-217ENST00000592741 RNASE6Q93091 150 aaKnown RBP13.52□□□□□ -0.24
PRKCSH-217ENST00000592741 ZGRF1Q86YA3 2104 aa13.52□□□□□ -0.24
PRKCSH-217ENST00000592741 RIF1Q5UIP0 2472 aaKnown RBP13.52□□□□□ -0.25
PRKCSH-217ENST00000592741 TRGC1P0CF51 173 aa13.52□□□□□ -0.25
PRKCSH-217ENST00000592741 FRZBQ92765 325 aa13.52□□□□□ -0.25
PRKCSH-217ENST00000592741 HARBI1Q96MB7 349 aa13.52□□□□□ -0.25
PRKCSH-217ENST00000592741 MGAQ8IWI9 3026 aa13.52□□□□□ -0.25
PRKCSH-217ENST00000592741 SHISA9B4DS77 424 aa13.51□□□□□ -0.25
PRKCSH-217ENST00000592741 FCN3O75636 299 aa13.51□□□□□ -0.25
PRKCSH-217ENST00000592741 IGFBP2P18065 325 aa13.51□□□□□ -0.25
PRKCSH-217ENST00000592741 OR51G1Q8NGK1 321 aa13.51□□□□□ -0.25
PRKCSH-217ENST00000592741 PYGO2Q9BRQ0 406 aa13.51□□□□□ -0.25
PRKCSH-217ENST00000592741 SRD5A3Q9H8P0 318 aa13.51□□□□□ -0.25
PRKCSH-217ENST00000592741 ELOA3CA0A087WX78 387 aaPredicted RBP13.51□□□□□ -0.25
PRKCSH-217ENST00000592741 H0YJW9 148 aa13.51□□□□□ -0.25
PRKCSH-217ENST00000592741 TNFRSF13BO14836 293 aaPredicted RBP13.51□□□□□ -0.25
PRKCSH-217ENST00000592741 EFNB3Q15768 340 aa13.51□□□□□ -0.25
PRKCSH-217ENST00000592741 FAM71F2Q6NXP2 309 aa13.51□□□□□ -0.25
PRKCSH-217ENST00000592741 LYPD2Q6UXB3 125 aa13.51□□□□□ -0.25
PRKCSH-217ENST00000592741 OR10X1Q8NGY0 326 aa13.51□□□□□ -0.25
PRKCSH-217ENST00000592741 SCNM1Q9BWG6 230 aa13.51□□□□□ -0.25
PRKCSH-217ENST00000592741 E7EQL1 145 aa13.5□□□□□ -0.25
PRKCSH-217ENST00000592741 NDUFB4O95168 129 aa13.5□□□□□ -0.25
PRKCSH-217ENST00000592741 MT-CO2P00403 227 aa13.5□□□□□ -0.25
PRKCSH-217ENST00000592741 S100A2P29034 98 aa13.5□□□□□ -0.25
PRKCSH-217ENST00000592741 GCHFRP30047 84 aa13.5□□□□□ -0.25
PRKCSH-217ENST00000592741 C2orf83Q53S99 150 aa13.5□□□□□ -0.25
PRKCSH-217ENST00000592741 NIT2Q9NQR4 276 aa13.5□□□□□ -0.25
PRKCSH-217ENST00000592741 DVL1O14640 695 aa13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 PPP1R2P9O14990 202 aa13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 SRP14P37108 136 aaKnown RBP13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 PRR20EP86478 221 aa13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 PRR20CP86479 221 aa13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 PRR20DP86480 221 aa13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 PRR20BP86481 221 aa13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 PRR20AP86496 221 aa13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 TMEM177Q53S58 311 aa13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 TMEM144Q7Z5S9 345 aa13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 LINC01551Q86U37 167 aa13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 DMRTC2Q8IXT2 367 aaPredicted RBP13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 LINC00311Q8N616 119 aa13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 C8orf31Q8N9H6 132 aa13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 OR5T1Q8NG75 326 aa13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 OR5AN1Q8NGI8 311 aa13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 OR1L8Q8NGR8 309 aa13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 FLYWCH2Q96CP2 140 aaKnown RBP13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 VKORC1Q9BQB6 163 aa13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 PHOX2AO14813 284 aa13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 SPATA31B1PQ5VZV4 182 aa13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 TMEM186Q96B77 213 aa13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 COMMD5Q9GZQ3 224 aa13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 SEPSECSQ9HD40 501 aaKnown RBP13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 GAR1Q9NY12 217 aaKnown RBP13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 CTSZQ9UBR2 303 aa13.49□□□□□ -0.25
PRKCSH-217ENST00000592741 NBEAQ8NFP9 2946 aa13.48□□□□□ -0.25
PRKCSH-217ENST00000592741 IFITM10A6NMD0 228 aa13.48□□□□□ -0.25
PRKCSH-217ENST00000592741 PPP5D1E7EU14 171 aa13.48□□□□□ -0.25
PRKCSH-217ENST00000592741 CD99P14209 185 aa13.48□□□□□ -0.25
PRKCSH-217ENST00000592741 REG1BP48304 166 aa13.48□□□□□ -0.25
PRKCSH-217ENST00000592741 C4orf17Q53FE4 359 aa13.48□□□□□ -0.25
PRKCSH-217ENST00000592741 KCNIP4Q6PIL6 250 aa13.48□□□□□ -0.25
PRKCSH-217ENST00000592741 PDPNQ86YL7 162 aa13.48□□□□□ -0.25
PRKCSH-217ENST00000592741 ZNF596Q8TC21 504 aa13.48□□□□□ -0.25
PRKCSH-217ENST00000592741 ELOVL1Q9BW60 279 aa13.48□□□□□ -0.25
PRKCSH-217ENST00000592741 KAAG1Q9UBP8 84 aa13.48□□□□□ -0.25
PRKCSH-217ENST00000592741 SLC45A2Q9UMX9 530 aa13.48□□□□□ -0.25
PRKCSH-217ENST00000592741 RP1L1Q8IWN7 2480 aaPredicted RBP13.48□□□□□ -0.25
PRKCSH-217ENST00000592741 RNASE2P10153 161 aaKnown RBP13.48□□□□□ -0.25
PRKCSH-217ENST00000592741 USF1P22415 310 aaPredicted RBP13.48□□□□□ -0.25
PRKCSH-217ENST00000592741 LOXP28300 417 aaPredicted RBP13.48□□□□□ -0.25
PRKCSH-217ENST00000592741 CHRNB4P30926 498 aa13.48□□□□□ -0.25
PRKCSH-217ENST00000592741 RPL8P62917 257 aaKnown RBP13.48□□□□□ -0.25
PRKCSH-217ENST00000592741 OR4A5Q8NH83 315 aa13.48□□□□□ -0.25
PRKCSH-217ENST00000592741 SLC35E1Q96K37 410 aa13.48□□□□□ -0.25
PRKCSH-217ENST00000592741 TMEM204Q9BSN7 226 aa13.48□□□□□ -0.25
PRKCSH-217ENST00000592741 DERL1Q9BUN8 251 aa13.48□□□□□ -0.25
PRKCSH-217ENST00000592741 CEP250Q9BV73 2442 aa13.47□□□□□ -0.25
PRKCSH-217ENST00000592741 A0A1W2PPQ1 181 aa13.47□□□□□ -0.25
PRKCSH-217ENST00000592741 LINC00869P0C866 280 aa13.47□□□□□ -0.25
PRKCSH-217ENST00000592741 APOBEC3AP31941 199 aaPredicted RBP13.47□□□□□ -0.25
PRKCSH-217ENST00000592741 ERHP84090 104 aaKnown RBP13.47□□□□□ -0.25
PRKCSH-217ENST00000592741 OR4P4Q8NGL7 312 aa13.47□□□□□ -0.25
PRKCSH-217ENST00000592741 OR4C13Q8NGP0 309 aa13.47□□□□□ -0.25
PRKCSH-217ENST00000592741 OR2T10Q8NGZ9 312 aa13.47□□□□□ -0.25
PRKCSH-217ENST00000592741 VSTM2AQ8TAG5 236 aa13.47□□□□□ -0.25
PRKCSH-217ENST00000592741 FAM122AQ96E09 287 aa13.47□□□□□ -0.25
PRKCSH-217ENST00000592741 NABP2Q9BQ15 211 aa13.47□□□□□ -0.25
PRKCSH-217ENST00000592741 NDUFA4L2Q9NRX3 87 aa13.47□□□□□ -0.25
PRKCSH-217ENST00000592741 YTHDF2Q9Y5A9 579 aaKnown RBP13.47□□□□□ -0.25
PRKCSH-217ENST00000592741 LAMA5O15230 3695 aa13.47□□□□□ -0.25
PRKCSH-217ENST00000592741 SCO2A0A1W2PP80 73 aa13.46□□□□□ -0.25
PRKCSH-217ENST00000592741 GGCTO75223 188 aaKnown RBP13.46□□□□□ -0.25
PRKCSH-217ENST00000592741 CD3EP07766 207 aa13.46□□□□□ -0.25
PRKCSH-217ENST00000592741 FAM87AP0C7U9 286 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms