RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 C19orf54Q5BKX5 351 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 MORN3Q6PF18 240 aaPredicted RBP5.18□□□□□ -1.58
SMAD4-212ENST00000591126 C9orf139Q6ZV77 190 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 LRP11Q86VZ4 500 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 PPIL3Q9H2H8 161 aaKnown RBP5.18□□□□□ -1.58
SMAD4-212ENST00000591126 SMDT1Q9H4I9 107 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 TNFSF18Q9UNG2 199 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 CACNA1EQ15878 2313 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 IGKV3-7A0A075B6H7 116 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 TRAV25A0A0B4J276 109 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 MAP1LC3B2A6NCE7 125 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 ZNF727A8MUV8 499 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 MFNGO00587 321 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 PLAUP00749 431 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 IL4P05112 153 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 SRIP30626 198 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 GPR183P32249 361 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 ZNF90Q03938 601 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 TNFRSF9Q07011 255 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 USF2Q15853 346 aaPredicted RBP5.18□□□□□ -1.58
SMAD4-212ENST00000591126 PRSS8Q16651 343 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 TEX261Q6UWH6 196 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 CLRN3Q8NCR9 226 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 MAP1LC3BQ9GZQ8 125 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 MRPL27Q9P0M9 148 aaKnown RBP5.18□□□□□ -1.58
SMAD4-212ENST00000591126 ASCC3Q8N3C0 2202 aaKnown RBP5.18□□□□□ -1.58
SMAD4-212ENST00000591126 TRGV2A0A075B6R0 118 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 GHRHP01286 108 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 PI3P19957 117 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 PSG5Q15238 335 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 WFDC12Q8WWY7 111 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 EAF1Q96JC9 268 aaPredicted RBP5.18□□□□□ -1.58
SMAD4-212ENST00000591126 DAZ1Q9NQZ3 744 aaKnown RBP5.18□□□□□ -1.58
SMAD4-212ENST00000591126 MPTX1A8MV57 137 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 BCL2L11O43521 198 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 PITX3O75364 302 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 M6PRP20645 277 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 SP6Q3SY56 376 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 CLEC18BQ6UXF7 455 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 Q6ZS49 121 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 ZNF383Q8NA42 475 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 OR5H6Q8NGV6 325 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 KLK11Q9UBX7 282 aa5.18□□□□□ -1.58
SMAD4-212ENST00000591126 COL5A1P20908 1838 aaPredicted RBP5.18□□□□□ -1.58
SMAD4-212ENST00000591126 SAA2-SAA4A0A096LPE2 208 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 C17orf98A8MV24 154 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 INSP01308 110 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 SAA2P0DJI9 122 aaPredicted RBP5.17□□□□□ -1.58
SMAD4-212ENST00000591126 CD37P11049 281 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 COL8A1P27658 744 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 RANP62826 216 aaKnown RBP5.17□□□□□ -1.58
SMAD4-212ENST00000591126 BTN1A1Q13410 526 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 CYP2G1PQ6ZSU1 146 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 SH2D6Q7Z4S9 175 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 ST6GALNAC6Q969X2 333 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 ZNF837Q96EG3 531 aaPredicted RBP5.17□□□□□ -1.58
SMAD4-212ENST00000591126 CTDSP1Q9GZU7 261 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 NYNRINQ9P2P1 1898 aaKnown RBP5.17□□□□□ -1.58
SMAD4-212ENST00000591126 SMIM18P0DKX4 95 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 HIST1H1AQ02539 215 aaPredicted RBP5.17□□□□□ -1.58
SMAD4-212ENST00000591126 PPP1R1AQ13522 171 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 COTL1Q14019 142 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 FAM53AQ6NSI3 398 aaPredicted RBP5.17□□□□□ -1.58
SMAD4-212ENST00000591126 CD200R1LQ6Q8B3 271 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 TMUB2Q71RG4 321 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 KLHDC1Q8N7A1 406 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 PPP1R1CQ8WVI7 109 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 AMELYQ99218 206 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 ASCL2Q99929 193 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 SAMD10Q9BYL1 202 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 DOK5Q9P104 306 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 PHLDA3Q9Y5J5 127 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 IGHV3OR16-12A0A075B7B8 117 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 HOXA3O43365 443 aaPredicted RBP5.17□□□□□ -1.58
SMAD4-212ENST00000591126 HLA-DRB1P01911 266 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 SOD3P08294 240 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 RCC1P18754 421 aaPredicted RBP5.17□□□□□ -1.58
SMAD4-212ENST00000591126 ADIRFQ15847 76 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 TMEM95Q3KNT9 176 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 ZNF585BQ52M93 769 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 BRD3OSQ6XYD6 125 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 FA2HQ7L5A8 372 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 HIST1H2BAQ96A08 127 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 GNG13Q9P2W3 67 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 CLDN16Q9Y5I7 305 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 ZFC3H1O60293 1989 aaKnown RBP5.17□□□□□ -1.58
SMAD4-212ENST00000591126 A8MXK9 166 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 ISLRO14498 428 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 PNRC1Q12796 327 aaPredicted RBP5.17□□□□□ -1.58
SMAD4-212ENST00000591126 FAM201AQ5SY85 155 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 MYPOPQ86VE0 399 aaPredicted RBP5.17□□□□□ -1.58
SMAD4-212ENST00000591126 C2CD4CQ8TF44 421 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 SMIM7Q9BQ49 75 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 DPH3P1Q9H4G8 78 aa5.17□□□□□ -1.58
SMAD4-212ENST00000591126 ZNF705GA8MUZ8 300 aaPredicted RBP5.16□□□□□ -1.58
SMAD4-212ENST00000591126 CST7O76096 145 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 CRPP02741 224 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 HTN1P15515 57 aa5.16□□□□□ -1.58
SMAD4-212ENST00000591126 IGFBP3P17936 291 aaPredicted RBP5.16□□□□□ -1.58
SMAD4-212ENST00000591126 ERVFC1-1P60608 527 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms