RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 WT1-ASQ06250 92 aa17.07■□□□□ 0.32
MBD3-208ENST00000590830 HAPLN4Q86UW8 402 aa17.07■□□□□ 0.32
MBD3-208ENST00000590830 OR13C8Q8NGS7 320 aa17.07■□□□□ 0.32
MBD3-208ENST00000590830 MARCH1Q8TCQ1 289 aa17.07■□□□□ 0.32
MBD3-208ENST00000590830 TP53RKQ96S44 253 aa17.07■□□□□ 0.32
MBD3-208ENST00000590830 SRSF8Q9BRL6 282 aaKnown RBP17.07■□□□□ 0.32
MBD3-208ENST00000590830 ZNF256Q9Y2P7 627 aaPredicted RBP17.07■□□□□ 0.32
MBD3-208ENST00000590830 OR51B2Q9Y5P1 312 aa17.07■□□□□ 0.32
MBD3-208ENST00000590830 S4R3C0 116 aa17.07■□□□□ 0.32
MBD3-208ENST00000590830 FABP12A6NFH5 140 aa17.06■□□□□ 0.32
MBD3-208ENST00000590830 SPNP16150 400 aa17.06■□□□□ 0.32
MBD3-208ENST00000590830 OR4C16Q8NGL9 310 aa17.06■□□□□ 0.32
MBD3-208ENST00000590830 OR9G4Q8NGQ1 327 aa17.06■□□□□ 0.32
MBD3-208ENST00000590830 OR1L8Q8NGR8 309 aa17.06■□□□□ 0.32
MBD3-208ENST00000590830 OR4C12Q96R67 309 aa17.06■□□□□ 0.32
MBD3-208ENST00000590830 RSL24D1Q9UHA3 163 aaKnown RBP17.06■□□□□ 0.32
MBD3-208ENST00000590830 ANKRD20A5PA0PJZ0 165 aa17.05■□□□□ 0.32
MBD3-208ENST00000590830 PPP5D1E7EU14 171 aa17.05■□□□□ 0.32
MBD3-208ENST00000590830 SNAPC5O75971 98 aa17.05■□□□□ 0.32
MBD3-208ENST00000590830 DEFA4P12838 97 aa17.05■□□□□ 0.32
MBD3-208ENST00000590830 MEF2DQ14814 521 aa17.05■□□□□ 0.32
MBD3-208ENST00000590830 RPEL1Q2QD12 228 aa17.05■□□□□ 0.32
MBD3-208ENST00000590830 ZFAND1Q8TCF1 268 aa17.05■□□□□ 0.32
MBD3-208ENST00000590830 CCDC140Q96MF4 163 aa17.05■□□□□ 0.32
MBD3-208ENST00000590830 RTBDNQ9BSG5 229 aaPredicted RBP17.05■□□□□ 0.32
MBD3-208ENST00000590830 ELOVL1Q9BW60 279 aa17.05■□□□□ 0.32
MBD3-208ENST00000590830 TMEM14BQ9NUH8 114 aa17.05■□□□□ 0.32
MBD3-208ENST00000590830 H0Y980 276 aa17.04■□□□□ 0.32
MBD3-208ENST00000590830 DHFRP00374 187 aa17.04■□□□□ 0.32
MBD3-208ENST00000590830 HLA-AP01891 365 aaKnown RBP17.04■□□□□ 0.32
MBD3-208ENST00000590830 CTSDP07339 412 aaPredicted RBP17.04■□□□□ 0.32
MBD3-208ENST00000590830 CSN3P07498 182 aa17.04■□□□□ 0.32
MBD3-208ENST00000590830 AKAIN1P0CW23 69 aa17.04■□□□□ 0.32
MBD3-208ENST00000590830 OR13C7P0DN81 318 aa17.04■□□□□ 0.32
MBD3-208ENST00000590830 HIST1H1BP16401 226 aaKnown RBP17.04■□□□□ 0.32
MBD3-208ENST00000590830 IZUMO4Q1ZYL8 232 aa17.04■□□□□ 0.32
MBD3-208ENST00000590830 SP6Q3SY56 376 aa17.04■□□□□ 0.32
MBD3-208ENST00000590830 HINT2Q9BX68 163 aa17.04■□□□□ 0.32
MBD3-208ENST00000590830 PRNDQ9UKY0 176 aa17.04■□□□□ 0.32
MBD3-208ENST00000590830 C3orf85A0A1B0GTC6 90 aa17.03■□□□□ 0.32
MBD3-208ENST00000590830 MFSD2BA6NFX1 497 aa17.03■□□□□ 0.32
MBD3-208ENST00000590830 C15orf61A6NNL5 157 aa17.03■□□□□ 0.32
MBD3-208ENST00000590830 IGKV1-5P01602 117 aa17.03■□□□□ 0.32
MBD3-208ENST00000590830 IGLV1-51P01701 117 aa17.03■□□□□ 0.32
MBD3-208ENST00000590830 SERPINE2P07093 398 aa17.03■□□□□ 0.32
MBD3-208ENST00000590830 MFAP2P55001 183 aa17.03■□□□□ 0.32
MBD3-208ENST00000590830 DISC1C4P0D8 188 aa17.02■□□□□ 0.32
MBD3-208ENST00000590830 LY86O95711 162 aa17.02■□□□□ 0.32
MBD3-208ENST00000590830 P0C879 139 aa17.02■□□□□ 0.32
MBD3-208ENST00000590830 THOC7Q6I9Y2 204 aaKnown RBP17.02■□□□□ 0.32
MBD3-208ENST00000590830 CLEC19AQ6UXS0 136 aa17.02■□□□□ 0.32
MBD3-208ENST00000590830 ADAMTSL5Q6ZMM2 481 aa17.02■□□□□ 0.32
MBD3-208ENST00000590830 H2BFWTQ7Z2G1 175 aa17.02■□□□□ 0.32
MBD3-208ENST00000590830 GDPD1Q8N9F7 314 aa17.02■□□□□ 0.32
MBD3-208ENST00000590830 OR51S1Q8NGJ8 323 aa17.02■□□□□ 0.32
MBD3-208ENST00000590830 OR6Q1Q8NGQ2 317 aa17.02■□□□□ 0.32
MBD3-208ENST00000590830 C5orf66Q9H5L9 145 aa17.02■□□□□ 0.32
MBD3-208ENST00000590830 COPZ2Q9P299 210 aa17.02■□□□□ 0.32
MBD3-208ENST00000590830 V9GYH0 126 aa17.02■□□□□ 0.32
MBD3-208ENST00000590830 ZNF701M0R085 212 aaPredicted RBP17.01■□□□□ 0.31
MBD3-208ENST00000590830 OR2C1O95371 312 aa17.01■□□□□ 0.31
MBD3-208ENST00000590830 TATDN3Q17R31 274 aa17.01■□□□□ 0.31
MBD3-208ENST00000590830 OR5B3Q8NH48 314 aa17.01■□□□□ 0.31
MBD3-208ENST00000590830 LSM10Q969L4 123 aaKnown RBP17.01■□□□□ 0.31
MBD3-208ENST00000590830 EEF1AKMT3Q96AZ1 226 aa17.01■□□□□ 0.31
MBD3-208ENST00000590830 TSC22D3Q99576 134 aa17.01■□□□□ 0.31
MBD3-208ENST00000590830 THAP7Q9BT49 309 aaPredicted RBP17.01■□□□□ 0.31
MBD3-208ENST00000590830 FKBP11Q9NYL4 201 aa17.01■□□□□ 0.31
MBD3-208ENST00000590830 GPR132Q9UNW8 380 aa17.01■□□□□ 0.31
MBD3-208ENST00000590830 GGCTO75223 188 aaKnown RBP17■□□□□ 0.31
MBD3-208ENST00000590830 GP9P14770 177 aa17■□□□□ 0.31
MBD3-208ENST00000590830 HSD17B13Q7Z5P4 300 aaPredicted RBP17■□□□□ 0.31
MBD3-208ENST00000590830 OR4A16Q8NH70 328 aa17■□□□□ 0.31
MBD3-208ENST00000590830 B9D2Q9BPU9 175 aa17■□□□□ 0.31
MBD3-208ENST00000590830 SORL1Q92673 2214 aa17■□□□□ 0.31
MBD3-208ENST00000590830 A0A0B4J293 547 aa16.99■□□□□ 0.31
MBD3-208ENST00000590830 CLEC3BP05452 202 aa16.99■□□□□ 0.31
MBD3-208ENST00000590830 UCP1P25874 307 aa16.99■□□□□ 0.31
MBD3-208ENST00000590830 MECP2P51608 486 aaKnown RBP16.99■□□□□ 0.31
MBD3-208ENST00000590830 ZNF79Q15937 498 aa16.99■□□□□ 0.31
MBD3-208ENST00000590830 FAM209BQ5JX69 171 aa16.99■□□□□ 0.31
MBD3-208ENST00000590830 SLC25A24Q6NUK1 477 aa16.99■□□□□ 0.31
MBD3-208ENST00000590830 CCDC190Q86UF4 302 aa16.99■□□□□ 0.31
MBD3-208ENST00000590830 CCDC71LQ8N9Z2 235 aa16.99■□□□□ 0.31
MBD3-208ENST00000590830 ZNF502Q8TBZ5 544 aa16.99■□□□□ 0.31
MBD3-208ENST00000590830 SLC2A8Q9NY64 477 aa16.99■□□□□ 0.31
MBD3-208ENST00000590830 SIGLEC8Q9NYZ4 499 aa16.99■□□□□ 0.31
MBD3-208ENST00000590830 F11RQ9Y624 299 aaKnown RBP16.99■□□□□ 0.31
MBD3-208ENST00000590830 COL7A1Q02388 2944 aa16.99■□□□□ 0.31
MBD3-208ENST00000590830 EDN2P20800 178 aa16.98■□□□□ 0.31
MBD3-208ENST00000590830 ARL3P36405 182 aa16.98■□□□□ 0.31
MBD3-208ENST00000590830 SURF2Q15527 256 aaPredicted RBP16.98■□□□□ 0.31
MBD3-208ENST00000590830 TRIM63Q969Q1 353 aa16.98■□□□□ 0.31
MBD3-208ENST00000590830 CXorf58Q96LI9 332 aa16.98■□□□□ 0.31
MBD3-208ENST00000590830 PRRT1Q99946 306 aa16.98■□□□□ 0.31
MBD3-208ENST00000590830 TRBV7-1A0A0A6YYK4 115 aa16.97■□□□□ 0.31
MBD3-208ENST00000590830 A0A0G2JRQ6 117 aa16.97■□□□□ 0.31
MBD3-208ENST00000590830 HSPE1P61604 102 aaKnown RBP16.97■□□□□ 0.31
MBD3-208ENST00000590830 DCTN2Q13561 401 aaKnown RBP16.97■□□□□ 0.31
MBD3-208ENST00000590830 KLF9Q13886 244 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms