RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 MECP2P51608 486 aaKnown RBP10.8□□□□□ -0.68
SCAMP4-212ENST00000590266 AKR1C2P52895 323 aa10.8□□□□□ -0.68
SCAMP4-212ENST00000590266 IZUMO4Q1ZYL8 232 aa10.8□□□□□ -0.68
SCAMP4-212ENST00000590266 DEFB121Q5J5C9 76 aa10.8□□□□□ -0.68
SCAMP4-212ENST00000590266 ZNF343Q6P1L6 599 aa10.8□□□□□ -0.68
SCAMP4-212ENST00000590266 NECAP1Q8NC96 275 aa10.8□□□□□ -0.68
SCAMP4-212ENST00000590266 OR1L8Q8NGR8 309 aa10.8□□□□□ -0.68
SCAMP4-212ENST00000590266 OR4A16Q8NH70 328 aa10.8□□□□□ -0.68
SCAMP4-212ENST00000590266 RNASE11Q8TAA1 199 aaKnown RBP10.8□□□□□ -0.68
SCAMP4-212ENST00000590266 SEC22AQ96IW7 307 aa10.8□□□□□ -0.68
SCAMP4-212ENST00000590266 TSC22D3Q99576 134 aa10.8□□□□□ -0.68
SCAMP4-212ENST00000590266 PRRT1Q99946 306 aa10.8□□□□□ -0.68
SCAMP4-212ENST00000590266 PRNDQ9UKY0 176 aa10.8□□□□□ -0.68
SCAMP4-212ENST00000590266 WI2-2373I1.2A0A1W2PRP0 233 aa10.79□□□□□ -0.68
SCAMP4-212ENST00000590266 IGLC7A0M8Q6 106 aa10.79□□□□□ -0.68
SCAMP4-212ENST00000590266 NDUFB8O95169 186 aa10.79□□□□□ -0.68
SCAMP4-212ENST00000590266 LY86O95711 162 aa10.79□□□□□ -0.68
SCAMP4-212ENST00000590266 OR13C7P0DN81 318 aa10.79□□□□□ -0.68
SCAMP4-212ENST00000590266 CTRB1P17538 263 aa10.79□□□□□ -0.68
SCAMP4-212ENST00000590266 ZP3P21754 424 aa10.79□□□□□ -0.68
SCAMP4-212ENST00000590266 SYNJ2BPP57105 145 aa10.79□□□□□ -0.68
SCAMP4-212ENST00000590266 EGFEM1PQ0D2K5 195 aa10.79□□□□□ -0.68
SCAMP4-212ENST00000590266 RPEL1Q2QD12 228 aa10.79□□□□□ -0.68
SCAMP4-212ENST00000590266 SPANXN2Q5MJ10 180 aa10.79□□□□□ -0.68
SCAMP4-212ENST00000590266 CTRB2Q6GPI1 263 aa10.79□□□□□ -0.68
SCAMP4-212ENST00000590266 CCDC190Q86UF4 302 aa10.79□□□□□ -0.68
SCAMP4-212ENST00000590266 TOMM5Q8N4H5 51 aa10.79□□□□□ -0.68
SCAMP4-212ENST00000590266 FAM212BQ9NTI7 297 aaPredicted RBP10.79□□□□□ -0.68
SCAMP4-212ENST00000590266 SCP2D1Q9UJQ7 156 aa10.79□□□□□ -0.68
SCAMP4-212ENST00000590266 DBX1A6NMT0 343 aa10.78□□□□□ -0.68
SCAMP4-212ENST00000590266 C15orf61A6NNL5 157 aa10.78□□□□□ -0.68
SCAMP4-212ENST00000590266 PPP5D1E7EU14 171 aa10.78□□□□□ -0.68
SCAMP4-212ENST00000590266 CRYGCP07315 174 aa10.78□□□□□ -0.68
SCAMP4-212ENST00000590266 PTBP1P26599 531 aaKnown RBP eCLIP10.78□□□□□ -0.68
SCAMP4-212ENST00000590266 AP3S2P59780 193 aa10.78□□□□□ -0.68
SCAMP4-212ENST00000590266 ZNF79Q15937 498 aa10.78□□□□□ -0.68
SCAMP4-212ENST00000590266 HAPLN4Q86UW8 402 aa10.78□□□□□ -0.68
SCAMP4-212ENST00000590266 LSM10Q969L4 123 aaKnown RBP10.78□□□□□ -0.68
SCAMP4-212ENST00000590266 FANCD2OSQ96PS1 177 aa10.78□□□□□ -0.68
SCAMP4-212ENST00000590266 OR4C12Q96R67 309 aa10.78□□□□□ -0.68
SCAMP4-212ENST00000590266 PRR25Q96S07 402 aa10.78□□□□□ -0.68
SCAMP4-212ENST00000590266 RTBDNQ9BSG5 229 aaPredicted RBP10.78□□□□□ -0.68
SCAMP4-212ENST00000590266 K7EIL1 84 aa10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 PLXNB1O43157 2135 aa10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 HLA-AP01891 365 aaKnown RBP10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 OR5AC1P0C628 307 aa10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 HIST1H1BP16401 226 aaKnown RBP10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 FAUP35544 74 aaKnown RBP10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 WT1-ASQ06250 92 aa10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 SURF2Q15527 256 aaPredicted RBP10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 SPINK9Q5DT21 86 aa10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 ZNF57Q68EA5 555 aaPredicted RBP10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 SLC25A24Q6NUK1 477 aa10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 ACSM6Q6P461 480 aa10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 CLEC19AQ6UXS0 136 aa10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 OR6Q1Q8NGQ2 317 aa10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 TRIM63Q969Q1 353 aa10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 TMEM56Q96MV1 263 aa10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 ELOVL1Q9BW60 279 aa10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 C5orf66Q9H5L9 145 aa10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 NAA60Q9H7X0 242 aa10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 ZC4H2Q9NQZ6 224 aa10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 NDUFA4L2Q9NRX3 87 aa10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 TMEM14BQ9NUH8 114 aa10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 FKBP11Q9NYL4 201 aa10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 ZMAT5Q9UDW3 170 aaKnown RBP10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 PRKDCP78527 4128 aaKnown RBP10.77□□□□□ -0.69
SCAMP4-212ENST00000590266 IGLV11-55A0A075B6I3 123 aa10.76□□□□□ -0.69
SCAMP4-212ENST00000590266 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.76□□□□□ -0.69
SCAMP4-212ENST00000590266 IGHV3-21A0A0B4J1V1 117 aa10.76□□□□□ -0.69
SCAMP4-212ENST00000590266 MFSD2BA6NFX1 497 aa10.76□□□□□ -0.69
SCAMP4-212ENST00000590266 BMPR1BO00238 502 aa10.76□□□□□ -0.69
SCAMP4-212ENST00000590266 ATG12O94817 140 aa10.76□□□□□ -0.69
SCAMP4-212ENST00000590266 IGKV1-5P01602 117 aa10.76□□□□□ -0.69
SCAMP4-212ENST00000590266 FGF2P09038 288 aa10.76□□□□□ -0.69
SCAMP4-212ENST00000590266 AKR1C4P17516 323 aa10.76□□□□□ -0.69
SCAMP4-212ENST00000590266 INPP1P49441 399 aa10.76□□□□□ -0.69
SCAMP4-212ENST00000590266 INSL3P51460 131 aa10.76□□□□□ -0.69
SCAMP4-212ENST00000590266 KLF9Q13886 244 aaPredicted RBP10.76□□□□□ -0.69
SCAMP4-212ENST00000590266 KLF5Q13887 457 aaPredicted RBP10.76□□□□□ -0.69
SCAMP4-212ENST00000590266 TATDN3Q17R31 274 aa10.76□□□□□ -0.69
SCAMP4-212ENST00000590266 THOC7Q6I9Y2 204 aaKnown RBP10.76□□□□□ -0.69
SCAMP4-212ENST00000590266 ZNF429Q86V71 674 aa10.76□□□□□ -0.69
SCAMP4-212ENST00000590266 GDPD1Q8N9F7 314 aa10.76□□□□□ -0.69
SCAMP4-212ENST00000590266 OR5B3Q8NH48 314 aa10.76□□□□□ -0.69
SCAMP4-212ENST00000590266 EEF1AKMT3Q96AZ1 226 aa10.76□□□□□ -0.69
SCAMP4-212ENST00000590266 RRNAD1Q96FB5 475 aaKnown RBP10.76□□□□□ -0.69
SCAMP4-212ENST00000590266 SRSF8Q9BRL6 282 aaKnown RBP10.76□□□□□ -0.69
SCAMP4-212ENST00000590266 SLC2A8Q9NY64 477 aa10.76□□□□□ -0.69
SCAMP4-212ENST00000590266 GPR132Q9UNW8 380 aa10.76□□□□□ -0.69
SCAMP4-212ENST00000590266 CYB5BO43169 146 aa10.75□□□□□ -0.69
SCAMP4-212ENST00000590266 UCP1P25874 307 aa10.75□□□□□ -0.69
SCAMP4-212ENST00000590266 ARL3P36405 182 aa10.75□□□□□ -0.69
SCAMP4-212ENST00000590266 TRIQKQ629K1 86 aa10.75□□□□□ -0.69
SCAMP4-212ENST00000590266 HSD17B13Q7Z5P4 300 aaPredicted RBP10.75□□□□□ -0.69
SCAMP4-212ENST00000590266 SGPP2Q8IWX5 399 aa10.75□□□□□ -0.69
SCAMP4-212ENST00000590266 OR9G4Q8NGQ1 327 aa10.75□□□□□ -0.69
SCAMP4-212ENST00000590266 CCDC140Q96MF4 163 aa10.75□□□□□ -0.69
SCAMP4-212ENST00000590266 SCGB3A2Q96PL1 93 aa10.75□□□□□ -0.69
SCAMP4-212ENST00000590266 TMEM222Q9H0R3 208 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms