RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 C10orf55Q5SWW7 151 aa13.91□□□□□ -0.18
CXXC1-212ENST00000589940 TMEM14EPQ6UXP3 125 aa13.91□□□□□ -0.18
CXXC1-212ENST00000589940 PIFOQ8TCI5 191 aa13.91□□□□□ -0.18
CXXC1-212ENST00000589940 SSX3Q99909 188 aa13.91□□□□□ -0.18
CXXC1-212ENST00000589940 FBXL17Q9UF56 701 aa13.91□□□□□ -0.18
CXXC1-212ENST00000589940 STRAPQ9Y3F4 350 aaKnown RBP13.91□□□□□ -0.18
CXXC1-212ENST00000589940 E7EUB6 86 aa13.9□□□□□ -0.18
CXXC1-212ENST00000589940 TAAR5O14804 337 aa13.9□□□□□ -0.18
CXXC1-212ENST00000589940 CST7O76096 145 aa13.9□□□□□ -0.18
CXXC1-212ENST00000589940 COMPP49747 757 aaPredicted RBP13.9□□□□□ -0.18
CXXC1-212ENST00000589940 TMEM267Q0VDI3 215 aaPredicted RBP13.9□□□□□ -0.18
CXXC1-212ENST00000589940 AANATQ16613 207 aa13.9□□□□□ -0.18
CXXC1-212ENST00000589940 C9orf139Q6ZV77 190 aa13.9□□□□□ -0.18
CXXC1-212ENST00000589940 BSCL2Q96G97 398 aaPredicted RBP13.9□□□□□ -0.18
CXXC1-212ENST00000589940 OR4C12Q96R67 309 aa13.9□□□□□ -0.18
CXXC1-212ENST00000589940 FCN1O00602 326 aa13.9□□□□□ -0.18
CXXC1-212ENST00000589940 RPP30P78346 268 aaKnown RBP13.9□□□□□ -0.18
CXXC1-212ENST00000589940 KRTAP1-1Q07627 177 aa13.9□□□□□ -0.18
CXXC1-212ENST00000589940 SLC51BQ86UW2 128 aa13.9□□□□□ -0.18
CXXC1-212ENST00000589940 U3KQ87 197 aa13.9□□□□□ -0.18
CXXC1-212ENST00000589940 MXRA5Q9NR99 2828 aa13.89□□□□□ -0.19
CXXC1-212ENST00000589940 A0A1W2PN81 502 aa13.89□□□□□ -0.19
CXXC1-212ENST00000589940 CGB1A6NKQ9 187 aa13.89□□□□□ -0.19
CXXC1-212ENST00000589940 CD5LO43866 347 aa13.89□□□□□ -0.19
CXXC1-212ENST00000589940 CA2P00918 260 aa13.89□□□□□ -0.19
CXXC1-212ENST00000589940 METTL15P1P0C7V9 234 aa13.89□□□□□ -0.19
CXXC1-212ENST00000589940 CHRNA7P36544 502 aa13.89□□□□□ -0.19
CXXC1-212ENST00000589940 RPL27AP46776 148 aaKnown RBP13.89□□□□□ -0.19
CXXC1-212ENST00000589940 GNB1P62873 340 aa13.89□□□□□ -0.19
CXXC1-212ENST00000589940 IFITM2Q01629 132 aa13.89□□□□□ -0.19
CXXC1-212ENST00000589940 TEX29Q8N6K0 151 aa13.89□□□□□ -0.19
CXXC1-212ENST00000589940 SMIM3Q9BZL3 60 aa13.89□□□□□ -0.19
CXXC1-212ENST00000589940 SLA2Q9H6Q3 261 aa13.89□□□□□ -0.19
CXXC1-212ENST00000589940 ACANP16112 2415 aa13.89□□□□□ -0.19
CXXC1-212ENST00000589940 A0A1B0GW64 132 aa13.88□□□□□ -0.19
CXXC1-212ENST00000589940 INS-IGF2F8WCM5 200 aa13.88□□□□□ -0.19
CXXC1-212ENST00000589940 IFNA10P01566 189 aa13.88□□□□□ -0.19
CXXC1-212ENST00000589940 SSBP2P81877 361 aaPredicted RBP13.88□□□□□ -0.19
CXXC1-212ENST00000589940 BCL6BQ8N143 479 aaPredicted RBP13.88□□□□□ -0.19
CXXC1-212ENST00000589940 TMEM217Q8N7C4 229 aa13.88□□□□□ -0.19
CXXC1-212ENST00000589940 OR10W1Q8NGF6 305 aa13.88□□□□□ -0.19
CXXC1-212ENST00000589940 ZNF471Q9BX82 626 aaPredicted RBP13.88□□□□□ -0.19
CXXC1-212ENST00000589940 C15orf62A8K5M9 175 aa13.88□□□□□ -0.19
CXXC1-212ENST00000589940 DEFB112Q30KQ8 113 aa13.88□□□□□ -0.19
CXXC1-212ENST00000589940 Q8N9W7 124 aa13.88□□□□□ -0.19
CXXC1-212ENST00000589940 OR5C1Q8NGR4 320 aa13.88□□□□□ -0.19
CXXC1-212ENST00000589940 CYTL1Q9NRR1 136 aa13.88□□□□□ -0.19
CXXC1-212ENST00000589940 H3BUX3 64 aa13.87□□□□□ -0.19
CXXC1-212ENST00000589940 PLXNB1O43157 2135 aa13.87□□□□□ -0.19
CXXC1-212ENST00000589940 STPG2Q8N412 459 aa13.87□□□□□ -0.19
CXXC1-212ENST00000589940 SLC24A4Q8NFF2 622 aa13.87□□□□□ -0.19
CXXC1-212ENST00000589940 C22orf15Q8WYQ4 148 aa13.87□□□□□ -0.19
CXXC1-212ENST00000589940 RBM14Q96PK6 669 aaKnown RBP13.87□□□□□ -0.19
CXXC1-212ENST00000589940 MDFIC2A0A1B0GVS7 189 aa13.87□□□□□ -0.19
CXXC1-212ENST00000589940 HBG1P69891 147 aa13.87□□□□□ -0.19
CXXC1-212ENST00000589940 HBG2P69892 147 aa13.87□□□□□ -0.19
CXXC1-212ENST00000589940 OR1S2Q8NGQ3 325 aa13.87□□□□□ -0.19
CXXC1-212ENST00000589940 SRSF12Q8WXF0 261 aaKnown RBP13.87□□□□□ -0.19
CXXC1-212ENST00000589940 CNIH1O95406 144 aa13.86□□□□□ -0.19
CXXC1-212ENST00000589940 HTR2BP41595 481 aa13.86□□□□□ -0.19
CXXC1-212ENST00000589940 ERHP84090 104 aaKnown RBP13.86□□□□□ -0.19
CXXC1-212ENST00000589940 WT1-ASQ06250 92 aa13.86□□□□□ -0.19
CXXC1-212ENST00000589940 HAPLN4Q86UW8 402 aa13.86□□□□□ -0.19
CXXC1-212ENST00000589940 MRPL41Q8IXM3 137 aaKnown RBP13.86□□□□□ -0.19
CXXC1-212ENST00000589940 SLC25A33Q9BSK2 321 aa13.86□□□□□ -0.19
CXXC1-212ENST00000589940 WFDC1Q9HC57 220 aa13.86□□□□□ -0.19
CXXC1-212ENST00000589940 OR8U8P0C7N1 319 aa13.86□□□□□ -0.19
CXXC1-212ENST00000589940 NPY1RP25929 384 aa13.86□□□□□ -0.19
CXXC1-212ENST00000589940 UBA52P62987 128 aaKnown RBP13.86□□□□□ -0.19
CXXC1-212ENST00000589940 ARL16Q0P5N6 197 aa13.86□□□□□ -0.19
CXXC1-212ENST00000589940 CLINT1Q14677 625 aa13.86□□□□□ -0.19
CXXC1-212ENST00000589940 RPL7L1Q6DKI1 246 aaKnown RBP13.86□□□□□ -0.19
CXXC1-212ENST00000589940 OR8G2PQ6IF36 304 aa13.86□□□□□ -0.19
CXXC1-212ENST00000589940 TEX261Q6UWH6 196 aa13.86□□□□□ -0.19
CXXC1-212ENST00000589940 ZNF562Q6V9R5 426 aa13.86□□□□□ -0.19
CXXC1-212ENST00000589940 TMEM219Q86XT9 240 aa13.86□□□□□ -0.19
CXXC1-212ENST00000589940 STOML3Q8TAV4 291 aa13.86□□□□□ -0.19
CXXC1-212ENST00000589940 TMEM170AQ8WVE7 144 aa13.86□□□□□ -0.19
CXXC1-212ENST00000589940 RASL11BQ9BPW5 248 aa13.86□□□□□ -0.19
CXXC1-212ENST00000589940 MOB4Q9Y3A3 225 aa13.86□□□□□ -0.19
CXXC1-212ENST00000589940 NAV3Q8IVL0 2385 aa13.85□□□□□ -0.19
CXXC1-212ENST00000589940 IGLC7A0M8Q6 106 aa13.85□□□□□ -0.19
CXXC1-212ENST00000589940 PMS2P5A8MQ11 134 aa13.85□□□□□ -0.19
CXXC1-212ENST00000589940 JTBO76095 146 aa13.85□□□□□ -0.19
CXXC1-212ENST00000589940 SCAF4O95104 1147 aaKnown RBP13.85□□□□□ -0.19
CXXC1-212ENST00000589940 HLA-DRB1P01911 266 aa13.85□□□□□ -0.19
CXXC1-212ENST00000589940 SNCAP37840 140 aa13.85□□□□□ -0.19
CXXC1-212ENST00000589940 ATP5IP56385 69 aaPredicted RBP13.85□□□□□ -0.19
CXXC1-212ENST00000589940 FXYD3Q14802 87 aa13.85□□□□□ -0.19
CXXC1-212ENST00000589940 BSXQ3C1V8 233 aa13.85□□□□□ -0.19
CXXC1-212ENST00000589940 ST8SIA2Q92186 375 aa13.85□□□□□ -0.19
CXXC1-212ENST00000589940 PITPNC1Q9UKF7 332 aa13.85□□□□□ -0.19
CXXC1-212ENST00000589940 BAHCC1Q9P281 2608 aa13.85□□□□□ -0.19
CXXC1-212ENST00000589940 A6NDX4 124 aa13.84□□□□□ -0.19
CXXC1-212ENST00000589940 TEX22C9J3V5 150 aa13.84□□□□□ -0.19
CXXC1-212ENST00000589940 OR13C7P0DN81 318 aa13.84□□□□□ -0.19
CXXC1-212ENST00000589940 RAB11AP62491 216 aa13.84□□□□□ -0.19
CXXC1-212ENST00000589940 CX3CL1P78423 397 aa13.84□□□□□ -0.19
CXXC1-212ENST00000589940 OR10P1Q8NGE3 313 aa13.84□□□□□ -0.19
CXXC1-212ENST00000589940 FGF16O43320 207 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms