RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	AKAIN1	P0CW23	69 aa		13.23	□□□□□ -0.29
MBD1-221	ENST00000589867	MFAP2	P55001	183 aa		13.23	□□□□□ -0.29
MBD1-221	ENST00000589867	ERVK-16	P61578	105 aa		13.23	□□□□□ -0.29
MBD1-221	ENST00000589867	ATP5G2	Q06055	141 aa		13.23	□□□□□ -0.29
MBD1-221	ENST00000589867	MEF2D	Q14814	521 aa		13.23	□□□□□ -0.29
MBD1-221	ENST00000589867	IZUMO4	Q1ZYL8	232 aa		13.23	□□□□□ -0.29
MBD1-221	ENST00000589867	C15orf32	Q32M92	178 aa		13.23	□□□□□ -0.29
MBD1-221	ENST00000589867	CCDC140	Q96MF4	163 aa		13.23	□□□□□ -0.29
MBD1-221	ENST00000589867	SRSF8	Q9BRL6	282 aa	Known RBP	13.23	□□□□□ -0.29
MBD1-221	ENST00000589867	COMMD5	Q9GZQ3	224 aa		13.23	□□□□□ -0.29
MBD1-221	ENST00000589867	C5orf66	Q9H5L9	145 aa		13.23	□□□□□ -0.29
MBD1-221	ENST00000589867	TMEM14B	Q9NUH8	114 aa		13.23	□□□□□ -0.29
MBD1-221	ENST00000589867	FBXL7	Q9UJT9	491 aa		13.23	□□□□□ -0.29
MBD1-221	ENST00000589867	ZP3	P21754	424 aa		13.22	□□□□□ -0.29
MBD1-221	ENST00000589867	SP6	Q3SY56	376 aa		13.22	□□□□□ -0.29
MBD1-221	ENST00000589867	OR1L8	Q8NGR8	309 aa		13.22	□□□□□ -0.29
MBD1-221	ENST00000589867	SLC2A8	Q9NY64	477 aa		13.22	□□□□□ -0.29
MBD1-221	ENST00000589867	GPR132	Q9UNW8	380 aa		13.22	□□□□□ -0.29
MBD1-221	ENST00000589867	OR51B2	Q9Y5P1	312 aa		13.22	□□□□□ -0.29
MBD1-221	ENST00000589867		S4R3C0	116 aa		13.22	□□□□□ -0.29
MBD1-221	ENST00000589867	C15orf61	A6NNL5	157 aa		13.21	□□□□□ -0.29
MBD1-221	ENST00000589867	IGHV3-23	P01764	117 aa		13.21	□□□□□ -0.29
MBD1-221	ENST00000589867	TRAPPC2	P0DI81	140 aa		13.21	□□□□□ -0.29
MBD1-221	ENST00000589867	TRAPPC2B	P0DI82	140 aa		13.21	□□□□□ -0.29
MBD1-221	ENST00000589867	S100G	P29377	79 aa		13.21	□□□□□ -0.29
MBD1-221	ENST00000589867	ECI1	P42126	302 aa		13.21	□□□□□ -0.29
MBD1-221	ENST00000589867	INSL3	P51460	131 aa		13.21	□□□□□ -0.29
MBD1-221	ENST00000589867	KLF9	Q13886	244 aa	Predicted RBP	13.21	□□□□□ -0.29
MBD1-221	ENST00000589867	HAPLN4	Q86UW8	402 aa		13.21	□□□□□ -0.29
MBD1-221	ENST00000589867	ZNF429	Q86V71	674 aa		13.21	□□□□□ -0.29
MBD1-221	ENST00000589867	OR51S1	Q8NGJ8	323 aa		13.21	□□□□□ -0.29
MBD1-221	ENST00000589867	PRR25	Q96S07	402 aa		13.21	□□□□□ -0.29
MBD1-221	ENST00000589867	THAP7	Q9BT49	309 aa	Predicted RBP	13.21	□□□□□ -0.29
MBD1-221	ENST00000589867		A0A0G2JRQ6	117 aa		13.2	□□□□□ -0.3
MBD1-221	ENST00000589867	C3orf85	A0A1B0GTC6	90 aa		13.2	□□□□□ -0.3
MBD1-221	ENST00000589867	DPPA5	A6NC42	116 aa		13.2	□□□□□ -0.3
MBD1-221	ENST00000589867	MFSD2B	A6NFX1	497 aa		13.2	□□□□□ -0.3
MBD1-221	ENST00000589867	DISC1	C4P0D8	188 aa		13.2	□□□□□ -0.3
MBD1-221	ENST00000589867	SAP30	O75446	220 aa		13.2	□□□□□ -0.3
MBD1-221	ENST00000589867	OR13C7	P0DN81	318 aa		13.2	□□□□□ -0.3
MBD1-221	ENST00000589867	UCP1	P25874	307 aa		13.2	□□□□□ -0.3
MBD1-221	ENST00000589867	SYNJ2BP	P57105	145 aa		13.2	□□□□□ -0.3
MBD1-221	ENST00000589867	ADAMTSL5	Q6ZMM2	481 aa		13.2	□□□□□ -0.3
MBD1-221	ENST00000589867	LHFPL5	Q8TAF8	219 aa		13.2	□□□□□ -0.3
MBD1-221	ENST00000589867	ZFAND1	Q8TCF1	268 aa		13.2	□□□□□ -0.3
MBD1-221	ENST00000589867	TMEM230	Q96A57	120 aa		13.2	□□□□□ -0.3
MBD1-221	ENST00000589867	LSM4	Q9Y4Z0	139 aa	Known RBP	13.2	□□□□□ -0.3
MBD1-221	ENST00000589867	HUWE1	Q7Z6Z7	4374 aa	Known RBP	13.19	□□□□□ -0.3
MBD1-221	ENST00000589867		A0A0B4J293	547 aa		13.19	□□□□□ -0.3
MBD1-221	ENST00000589867	PPP5D1	E7EU14	171 aa		13.19	□□□□□ -0.3
MBD1-221	ENST00000589867	HLA-A	P01891	365 aa	Known RBP	13.19	□□□□□ -0.3
MBD1-221	ENST00000589867	SERPINE2	P07093	398 aa		13.19	□□□□□ -0.3
MBD1-221	ENST00000589867	ETV6	P41212	452 aa		13.19	□□□□□ -0.3
MBD1-221	ENST00000589867	SURF2	Q15527	256 aa	Predicted RBP	13.19	□□□□□ -0.3
MBD1-221	ENST00000589867	GDPD1	Q8N9F7	314 aa		13.19	□□□□□ -0.3
MBD1-221	ENST00000589867	OR9G4	Q8NGQ1	327 aa		13.19	□□□□□ -0.3
MBD1-221	ENST00000589867	GLYATL2	Q8WU03	294 aa		13.19	□□□□□ -0.3
MBD1-221	ENST00000589867	COPZ2	Q9P299	210 aa		13.19	□□□□□ -0.3
MBD1-221	ENST00000589867	PRND	Q9UKY0	176 aa		13.19	□□□□□ -0.3
MBD1-221	ENST00000589867	SNAPC5	O75971	98 aa		13.18	□□□□□ -0.3
MBD1-221	ENST00000589867	IGLV1-51	P01701	117 aa		13.18	□□□□□ -0.3
MBD1-221	ENST00000589867	CSN3	P07498	182 aa		13.18	□□□□□ -0.3
MBD1-221	ENST00000589867	SPN	P16150	400 aa		13.18	□□□□□ -0.3
MBD1-221	ENST00000589867	HIST1H1B	P16401	226 aa	Known RBP	13.18	□□□□□ -0.3
MBD1-221	ENST00000589867	THOC7	Q6I9Y2	204 aa	Known RBP	13.18	□□□□□ -0.3
MBD1-221	ENST00000589867	H2BFWT	Q7Z2G1	175 aa		13.18	□□□□□ -0.3
MBD1-221	ENST00000589867	OR6Q1	Q8NGQ2	317 aa		13.18	□□□□□ -0.3
MBD1-221	ENST00000589867	OR5B3	Q8NH48	314 aa		13.18	□□□□□ -0.3
MBD1-221	ENST00000589867	LSM10	Q969L4	123 aa	Known RBP	13.18	□□□□□ -0.3
MBD1-221	ENST00000589867	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.18	□□□□□ -0.3
MBD1-221	ENST00000589867	CRYM-AS1	A6NIL9	109 aa		13.17	□□□□□ -0.3
MBD1-221	ENST00000589867	OR5AC1	P0C628	307 aa		13.17	□□□□□ -0.3
MBD1-221	ENST00000589867	EDN2	P20800	178 aa		13.17	□□□□□ -0.3
MBD1-221	ENST00000589867	MECP2	P51608	486 aa	Known RBP	13.17	□□□□□ -0.3
MBD1-221	ENST00000589867	PYDC2	Q56P42	97 aa		13.17	□□□□□ -0.3
MBD1-221	ENST00000589867	CLEC19A	Q6UXS0	136 aa		13.17	□□□□□ -0.3
MBD1-221	ENST00000589867		Q6ZRM9	215 aa		13.17	□□□□□ -0.3
MBD1-221	ENST00000589867		Q8N402	240 aa		13.17	□□□□□ -0.3
MBD1-221	ENST00000589867	CCDC71L	Q8N9Z2	235 aa		13.17	□□□□□ -0.3
MBD1-221	ENST00000589867	ZNF502	Q8TBZ5	544 aa		13.17	□□□□□ -0.3
MBD1-221	ENST00000589867	ZNF414	Q96IQ9	312 aa		13.17	□□□□□ -0.3
MBD1-221	ENST00000589867	TSC22D3	Q99576	134 aa		13.17	□□□□□ -0.3
MBD1-221	ENST00000589867	SDHC	Q99643	169 aa	Predicted RBP	13.17	□□□□□ -0.3
MBD1-221	ENST00000589867	PRRT1	Q99946	306 aa		13.17	□□□□□ -0.3
MBD1-221	ENST00000589867	HINT2	Q9BX68	163 aa		13.17	□□□□□ -0.3
MBD1-221	ENST00000589867	SRR	Q9GZT4	340 aa		13.17	□□□□□ -0.3
MBD1-221	ENST00000589867	TMEM222	Q9H0R3	208 aa		13.17	□□□□□ -0.3
MBD1-221	ENST00000589867	NAA60	Q9H7X0	242 aa		13.17	□□□□□ -0.3
MBD1-221	ENST00000589867	F11R	Q9Y624	299 aa	Known RBP	13.17	□□□□□ -0.3
MBD1-221	ENST00000589867		F8W735	103 aa	Predicted RBP	13.16	□□□□□ -0.3
MBD1-221	ENST00000589867	OR2C1	O95371	312 aa		13.16	□□□□□ -0.3
MBD1-221	ENST00000589867	CDS2	O95674	445 aa		13.16	□□□□□ -0.3
MBD1-221	ENST00000589867	DHFR	P00374	187 aa		13.16	□□□□□ -0.3
MBD1-221	ENST00000589867	DEFA4	P12838	97 aa		13.16	□□□□□ -0.3
MBD1-221	ENST00000589867	RPEL1	Q2QD12	228 aa		13.16	□□□□□ -0.3
MBD1-221	ENST00000589867	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.16	□□□□□ -0.3
MBD1-221	ENST00000589867	OR2C3	Q8N628	320 aa		13.16	□□□□□ -0.3
MBD1-221	ENST00000589867	FKBP11	Q9NYL4	201 aa		13.16	□□□□□ -0.3
MBD1-221	ENST00000589867	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	13.15	□□□□□ -0.3
MBD1-221	ENST00000589867		K7EIM0	57 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms