RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 PRR9Q5T870 116 aa4.27□□□□□ -1.73
VMP1-208ENST00000588617 IGFL1Q6UW32 110 aa4.27□□□□□ -1.73
VMP1-208ENST00000588617 Q6ZS49 121 aa4.27□□□□□ -1.73
VMP1-208ENST00000588617 OOSP2Q86WS3 158 aa4.27□□□□□ -1.73
VMP1-208ENST00000588617 TBC1D19Q8N5T2 526 aa4.27□□□□□ -1.73
VMP1-208ENST00000588617 CNEP1R1Q8N9A8 125 aa4.27□□□□□ -1.73
VMP1-208ENST00000588617 OR13C8Q8NGS7 320 aa4.27□□□□□ -1.73
VMP1-208ENST00000588617 ERMAPQ96PL5 475 aaPredicted RBP4.27□□□□□ -1.73
VMP1-208ENST00000588617 TMEM222Q9H0R3 208 aa4.27□□□□□ -1.73
VMP1-208ENST00000588617 MCTS1Q9ULC4 181 aaKnown RBP4.27□□□□□ -1.73
VMP1-208ENST00000588617 RNF17Q9BXT8 1623 aaKnown RBP4.27□□□□□ -1.73
VMP1-208ENST00000588617 ARHGAP31Q2M1Z3 1444 aa4.27□□□□□ -1.73
VMP1-208ENST00000588617 A0A1B0GW54 56 aa4.26□□□□□ -1.73
VMP1-208ENST00000588617 C17orf51A8MQB3 221 aa4.26□□□□□ -1.73
VMP1-208ENST00000588617 C17orf98A8MV24 154 aa4.26□□□□□ -1.73
VMP1-208ENST00000588617 UBFD1O14562 309 aaKnown RBP4.26□□□□□ -1.73
VMP1-208ENST00000588617 IGHV1-69P01742 117 aa4.26□□□□□ -1.73
VMP1-208ENST00000588617 ZNF705DP0CH99 300 aaPredicted RBP4.26□□□□□ -1.73
VMP1-208ENST00000588617 TAS2R30P59541 319 aa4.26□□□□□ -1.73
VMP1-208ENST00000588617 RPL30P62888 115 aaKnown RBP4.26□□□□□ -1.73
VMP1-208ENST00000588617 DR1Q01658 176 aa4.26□□□□□ -1.73
VMP1-208ENST00000588617 EIF4EBP2Q13542 120 aaPredicted RBP4.26□□□□□ -1.73
VMP1-208ENST00000588617 TEX36Q5VZQ5 186 aa4.26□□□□□ -1.73
VMP1-208ENST00000588617 LYG2Q86SG7 212 aa4.26□□□□□ -1.73
VMP1-208ENST00000588617 MSRB3Q8IXL7 192 aa4.26□□□□□ -1.73
VMP1-208ENST00000588617 OR52L1Q8NGH7 329 aa4.26□□□□□ -1.73
VMP1-208ENST00000588617 GPR119Q8TDV5 335 aa4.26□□□□□ -1.73
VMP1-208ENST00000588617 NEK7Q8TDX7 302 aa4.26□□□□□ -1.73
VMP1-208ENST00000588617 TSPAN32Q96QS1 320 aa4.26□□□□□ -1.73
VMP1-208ENST00000588617 RNASE7Q9H1E1 156 aaKnown RBP4.26□□□□□ -1.73
VMP1-208ENST00000588617 PAQR5Q9NXK6 330 aaPredicted RBP4.26□□□□□ -1.73
VMP1-208ENST00000588617 RSL24D1Q9UHA3 163 aaKnown RBP4.26□□□□□ -1.73
VMP1-208ENST00000588617 HEY1Q9Y5J3 304 aa4.26□□□□□ -1.73
VMP1-208ENST00000588617 V9GYQ6 96 aa4.26□□□□□ -1.73
VMP1-208ENST00000588617 AGLP35573 1532 aa4.26□□□□□ -1.73
VMP1-208ENST00000588617 EFCAB6Q5THR3 1501 aa4.26□□□□□ -1.73
VMP1-208ENST00000588617 TET3O43151 1660 aa4.26□□□□□ -1.73
VMP1-208ENST00000588617 RALGAPBQ86X10 1494 aa4.25□□□□□ -1.73
VMP1-208ENST00000588617 MROH1Q8NDA8 1641 aa4.25□□□□□ -1.73
VMP1-208ENST00000588617 KIDINS220Q9ULH0 1771 aa4.25□□□□□ -1.73
VMP1-208ENST00000588617 TRBV20OR9-2A0A075B6H5 130 aa4.25□□□□□ -1.73
VMP1-208ENST00000588617 TMEM269A0A1B0GVZ9 245 aa4.25□□□□□ -1.73
VMP1-208ENST00000588617 PSCAO43653 123 aa4.25□□□□□ -1.73
VMP1-208ENST00000588617 HRES1P13985 223 aa4.25□□□□□ -1.73
VMP1-208ENST00000588617 CD200P41217 278 aa4.25□□□□□ -1.73
VMP1-208ENST00000588617 ZNF117Q03924 483 aa4.25□□□□□ -1.73
VMP1-208ENST00000588617 DEFB134Q4QY38 66 aa4.25□□□□□ -1.73
VMP1-208ENST00000588617 PYDC2Q56P42 97 aa4.25□□□□□ -1.73
VMP1-208ENST00000588617 FRMPD1Q5SYB0 1578 aa4.25□□□□□ -1.73
VMP1-208ENST00000588617 KRTAP5-1Q6L8H4 278 aa4.25□□□□□ -1.73
VMP1-208ENST00000588617 SLC36A1Q7Z2H8 476 aa4.25□□□□□ -1.73
VMP1-208ENST00000588617 CT55Q8WUE5 264 aa4.25□□□□□ -1.73
VMP1-208ENST00000588617 CAPZA3Q96KX2 299 aa4.25□□□□□ -1.73
VMP1-208ENST00000588617 HIGD2AQ9BW72 106 aa4.25□□□□□ -1.73
VMP1-208ENST00000588617 WDR61Q9GZS3 305 aaKnown RBP4.25□□□□□ -1.73
VMP1-208ENST00000588617 UQCC1Q9NVA1 299 aa4.25□□□□□ -1.73
VMP1-208ENST00000588617 CNTLNQ9NXG0 1405 aa4.25□□□□□ -1.73
VMP1-208ENST00000588617 DSCAMO60469 2012 aa4.24□□□□□ -1.73
VMP1-208ENST00000588617 DIP2CQ9Y2E4 1556 aa4.24□□□□□ -1.73
VMP1-208ENST00000588617 VPS37CA5D8V6 355 aaPredicted RBP4.24□□□□□ -1.73
VMP1-208ENST00000588617 OR5K4A6NMS3 321 aa4.24□□□□□ -1.73
VMP1-208ENST00000588617 I3L521 148 aa4.24□□□□□ -1.73
VMP1-208ENST00000588617 SRP19P09132 144 aaKnown RBP4.24□□□□□ -1.73
VMP1-208ENST00000588617 TAS2R20P59543 309 aa4.24□□□□□ -1.73
VMP1-208ENST00000588617 SSX8Q7RTT4 187 aa4.24□□□□□ -1.73
VMP1-208ENST00000588617 HOPXQ9BPY8 73 aaPredicted RBP4.24□□□□□ -1.73
VMP1-208ENST00000588617 ABCC12Q96J65 1359 aa4.24□□□□□ -1.73
VMP1-208ENST00000588617 PRR14LQ5THK1 2151 aa4.23□□□□□ -1.73
VMP1-208ENST00000588617 ZC3H13Q5T200 1668 aaKnown RBP4.23□□□□□ -1.73
VMP1-208ENST00000588617 GPR179Q6PRD1 2367 aa4.23□□□□□ -1.73
VMP1-208ENST00000588617 PGRMC1O00264 195 aaKnown RBP4.23□□□□□ -1.73
VMP1-208ENST00000588617 CYBAP13498 195 aa4.23□□□□□ -1.73
VMP1-208ENST00000588617 POLR2GP62487 172 aaKnown RBP eCLIP4.23□□□□□ -1.73
VMP1-208ENST00000588617 POU6F1Q14863 301 aa4.23□□□□□ -1.73
VMP1-208ENST00000588617 GDPD1Q8N9F7 314 aa4.23□□□□□ -1.73
VMP1-208ENST00000588617 MRPL30Q8TCC3 161 aaKnown RBP4.23□□□□□ -1.73
VMP1-208ENST00000588617 ACOT12Q8WYK0 555 aa4.23□□□□□ -1.73
VMP1-208ENST00000588617 KLF6Q99612 283 aaPredicted RBP4.23□□□□□ -1.73
VMP1-208ENST00000588617 TTTY13Q9BZ97 58 aa4.23□□□□□ -1.73
VMP1-208ENST00000588617 CISHQ9NSE2 258 aa4.23□□□□□ -1.73
VMP1-208ENST00000588617 LAMC1P11047 1609 aa4.23□□□□□ -1.73
VMP1-208ENST00000588617 ABCA6Q8N139 1617 aa4.23□□□□□ -1.73
VMP1-208ENST00000588617 ROCK2O75116 1388 aaKnown RBP4.23□□□□□ -1.73
VMP1-208ENST00000588617 NID2Q14112 1375 aa4.23□□□□□ -1.73
VMP1-208ENST00000588617 RICTORQ6R327 1708 aa4.23□□□□□ -1.73
VMP1-208ENST00000588617 TRPM3Q9HCF6 1732 aaPredicted RBP4.23□□□□□ -1.73
VMP1-208ENST00000588617 MYOM2P54296 1465 aa4.23□□□□□ -1.73
VMP1-208ENST00000588617 ABCC3O15438 1527 aa4.22□□□□□ -1.73
VMP1-208ENST00000588617 A0A1W2PQ67 120 aa4.22□□□□□ -1.73
VMP1-208ENST00000588617 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
VMP1-208ENST00000588617 PIRO00625 290 aa4.22□□□□□ -1.73
VMP1-208ENST00000588617 RTL8CO15255 209 aa4.22□□□□□ -1.73
VMP1-208ENST00000588617 KLRC4O43908 158 aa4.22□□□□□ -1.73
VMP1-208ENST00000588617 S100A7P31151 101 aa4.22□□□□□ -1.73
VMP1-208ENST00000588617 RBM11P57052 281 aaKnown RBP4.22□□□□□ -1.73
VMP1-208ENST00000588617 RWDD2BP57060 319 aa4.22□□□□□ -1.73
VMP1-208ENST00000588617 C2orf91Q6ZV80 131 aa4.22□□□□□ -1.73
VMP1-208ENST00000588617 ZNF283Q8N7M2 679 aa4.22□□□□□ -1.73
VMP1-208ENST00000588617 MIEN1Q9BRT3 115 aa4.22□□□□□ -1.73
VMP1-208ENST00000588617 FBXL12Q9NXK8 326 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms