RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 ARL6IP1Q15041 203 aa10.1□□□□□ -0.79
CLPTM1-208ENST00000588274 SPAG16Q8N0X2 631 aa10.1□□□□□ -0.79
CLPTM1-208ENST00000588274 OR5B3Q8NH48 314 aa10.1□□□□□ -0.79
CLPTM1-208ENST00000588274 NRG4Q8WWG1 115 aa10.1□□□□□ -0.79
CLPTM1-208ENST00000588274 BSCL2Q96G97 398 aaPredicted RBP10.1□□□□□ -0.79
CLPTM1-208ENST00000588274 TPRKBQ9Y3C4 175 aa10.1□□□□□ -0.79
CLPTM1-208ENST00000588274 ETV7Q9Y603 341 aa10.1□□□□□ -0.79
CLPTM1-208ENST00000588274 A0A1B0GVY2 172 aa10.09□□□□□ -0.79
CLPTM1-208ENST00000588274 TRDV1A0A1B0GX56 115 aa10.09□□□□□ -0.79
CLPTM1-208ENST00000588274 OR4C46A6NHA9 309 aa10.09□□□□□ -0.79
CLPTM1-208ENST00000588274 CTSDP07339 412 aaPredicted RBP10.09□□□□□ -0.79
CLPTM1-208ENST00000588274 TAS2R31P59538 309 aa10.09□□□□□ -0.79
CLPTM1-208ENST00000588274 ZNF367Q7RTV3 350 aa10.09□□□□□ -0.79
CLPTM1-208ENST00000588274 OR13F1Q8NGS4 319 aa10.09□□□□□ -0.79
CLPTM1-208ENST00000588274 CD300LFQ8TDQ1 290 aa10.09□□□□□ -0.79
CLPTM1-208ENST00000588274 ATP6V0BQ99437 205 aa10.09□□□□□ -0.79
CLPTM1-208ENST00000588274 RNF2Q99496 336 aa10.09□□□□□ -0.79
CLPTM1-208ENST00000588274 QTRT1Q9BXR0 403 aaKnown RBP10.09□□□□□ -0.79
CLPTM1-208ENST00000588274 TMEM140Q9NV12 185 aa10.09□□□□□ -0.79
CLPTM1-208ENST00000588274 K7EMT4 169 aa10.08□□□□□ -0.8
CLPTM1-208ENST00000588274 SULT1C2O00338 296 aa10.08□□□□□ -0.8
CLPTM1-208ENST00000588274 EBAG9O00559 213 aa10.08□□□□□ -0.8
CLPTM1-208ENST00000588274 ZNF207O43670 478 aaKnown RBP10.08□□□□□ -0.8
CLPTM1-208ENST00000588274 PPYP01298 95 aa10.08□□□□□ -0.8
CLPTM1-208ENST00000588274 SERPINE2P07093 398 aa10.08□□□□□ -0.8
CLPTM1-208ENST00000588274 FAM90A2PQ658T7 463 aa10.08□□□□□ -0.8
CLPTM1-208ENST00000588274 C22orf42Q6IC83 251 aa10.08□□□□□ -0.8
CLPTM1-208ENST00000588274 GVQW1Q8N7I0 195 aa10.08□□□□□ -0.8
CLPTM1-208ENST00000588274 SCARB1Q8WTV0 552 aa10.08□□□□□ -0.8
CLPTM1-208ENST00000588274 SECTM1Q8WVN6 248 aa10.08□□□□□ -0.8
CLPTM1-208ENST00000588274 HRASLSQ9HDD0 168 aa10.08□□□□□ -0.8
CLPTM1-208ENST00000588274 APLNQ9ULZ1 77 aa10.08□□□□□ -0.8
CLPTM1-208ENST00000588274 IGHV3-21A0A0B4J1V1 117 aa10.07□□□□□ -0.8
CLPTM1-208ENST00000588274 ERICH4A6NGS2 130 aa10.07□□□□□ -0.8
CLPTM1-208ENST00000588274 C15orf62A8K5M9 175 aa10.07□□□□□ -0.8
CLPTM1-208ENST00000588274 CHEK1O14757 476 aa10.07□□□□□ -0.8
CLPTM1-208ENST00000588274 HPRT1P00492 218 aa10.07□□□□□ -0.8
CLPTM1-208ENST00000588274 CTSGP08311 255 aa10.07□□□□□ -0.8
CLPTM1-208ENST00000588274 NQO2P16083 231 aa10.07□□□□□ -0.8
CLPTM1-208ENST00000588274 MYL9P24844 172 aa10.07□□□□□ -0.8
CLPTM1-208ENST00000588274 FCGR2CP31995 323 aa10.07□□□□□ -0.8
CLPTM1-208ENST00000588274 SPSB3Q6PJ21 355 aa10.07□□□□□ -0.8
CLPTM1-208ENST00000588274 ZNF818PQ6ZRF7 136 aa10.07□□□□□ -0.8
CLPTM1-208ENST00000588274 C11orf45Q8TAV5 145 aa10.07□□□□□ -0.8
CLPTM1-208ENST00000588274 SLC25A38Q96DW6 304 aa10.07□□□□□ -0.8
CLPTM1-208ENST00000588274 OR10C1Q96KK4 312 aa10.07□□□□□ -0.8
CLPTM1-208ENST00000588274 RARRES2Q99969 163 aa10.07□□□□□ -0.8
CLPTM1-208ENST00000588274 CCDC90BQ9GZT6 254 aa10.07□□□□□ -0.8
CLPTM1-208ENST00000588274 CSTL1Q9H114 145 aa10.07□□□□□ -0.8
CLPTM1-208ENST00000588274 NDUFA4L2Q9NRX3 87 aa10.07□□□□□ -0.8
CLPTM1-208ENST00000588274 THYN1Q9P016 225 aa10.07□□□□□ -0.8
CLPTM1-208ENST00000588274 SMPXQ9UHP9 88 aa10.07□□□□□ -0.8
CLPTM1-208ENST00000588274 F11RQ9Y624 299 aaKnown RBP10.07□□□□□ -0.8
CLPTM1-208ENST00000588274 HSPG2P98160 4391 aa10.06□□□□□ -0.8
CLPTM1-208ENST00000588274 TEX50A0A1B0GTY4 177 aa10.06□□□□□ -0.8
CLPTM1-208ENST00000588274 NOTOA8MTQ0 251 aa10.06□□□□□ -0.8
CLPTM1-208ENST00000588274 OR13C7P0DN81 318 aa10.06□□□□□ -0.8
CLPTM1-208ENST00000588274 GNG2P59768 71 aa10.06□□□□□ -0.8
CLPTM1-208ENST00000588274 RBMS2Q15434 407 aaKnown RBP10.06□□□□□ -0.8
CLPTM1-208ENST00000588274 LAMTOR1Q6IAA8 161 aa10.06□□□□□ -0.8
CLPTM1-208ENST00000588274 Q8NAQ8 132 aa10.06□□□□□ -0.8
CLPTM1-208ENST00000588274 ZBTB34Q8NCN2 500 aa10.06□□□□□ -0.8
CLPTM1-208ENST00000588274 BEST4Q8NFU0 473 aa10.06□□□□□ -0.8
CLPTM1-208ENST00000588274 LGALS14Q8TCE9 139 aa10.06□□□□□ -0.8
CLPTM1-208ENST00000588274 COMMD5Q9GZQ3 224 aa10.06□□□□□ -0.8
CLPTM1-208ENST00000588274 MFFQ9GZY8 342 aa10.06□□□□□ -0.8
CLPTM1-208ENST00000588274 VCXQ9H320 206 aa10.06□□□□□ -0.8
CLPTM1-208ENST00000588274 PLEKHA2Q9HB19 425 aa10.06□□□□□ -0.8
CLPTM1-208ENST00000588274 C21orf62Q9NYP8 219 aa10.06□□□□□ -0.8
CLPTM1-208ENST00000588274 IGHV7-4-1A0A0J9YVY3 117 aa10.05□□□□□ -0.8
CLPTM1-208ENST00000588274 DBX1A6NMT0 343 aa10.05□□□□□ -0.8
CLPTM1-208ENST00000588274 MPTX1A8MV57 137 aa10.05□□□□□ -0.8
CLPTM1-208ENST00000588274 DEFB4AO15263 64 aa10.05□□□□□ -0.8
CLPTM1-208ENST00000588274 GIG44P09565 113 aaPredicted RBP10.05□□□□□ -0.8
CLPTM1-208ENST00000588274 THOC7Q6I9Y2 204 aaKnown RBP10.05□□□□□ -0.8
CLPTM1-208ENST00000588274 HOGA1Q86XE5 327 aa10.05□□□□□ -0.8
CLPTM1-208ENST00000588274 OR11H2Q8NH07 326 aa10.05□□□□□ -0.8
CLPTM1-208ENST00000588274 OR51H1Q8NH63 302 aa10.05□□□□□ -0.8
CLPTM1-208ENST00000588274 C20orf24Q9BUV8 137 aa10.05□□□□□ -0.8
CLPTM1-208ENST00000588274 RHPN1-AS1Q9BWJ2 59 aa10.05□□□□□ -0.8
CLPTM1-208ENST00000588274 COMMD9Q9P000 198 aa10.05□□□□□ -0.8
CLPTM1-208ENST00000588274 FBXL17Q9UF56 701 aa10.05□□□□□ -0.8
CLPTM1-208ENST00000588274 MARCH11A6NNE9 402 aa10.04□□□□□ -0.8
CLPTM1-208ENST00000588274 TRAPPC2P0DI81 140 aa10.04□□□□□ -0.8
CLPTM1-208ENST00000588274 TRAPPC2BP0DI82 140 aa10.04□□□□□ -0.8
CLPTM1-208ENST00000588274 FGF9P31371 208 aaPredicted RBP10.04□□□□□ -0.8
CLPTM1-208ENST00000588274 TCTAP57738 103 aa10.04□□□□□ -0.8
CLPTM1-208ENST00000588274 HSD17B13Q7Z5P4 300 aaPredicted RBP10.04□□□□□ -0.8
CLPTM1-208ENST00000588274 C2CD4CQ8TF44 421 aa10.04□□□□□ -0.8
CLPTM1-208ENST00000588274 LSM10Q969L4 123 aaKnown RBP10.04□□□□□ -0.8
CLPTM1-208ENST00000588274 AIFM2Q9BRQ8 373 aa10.04□□□□□ -0.8
CLPTM1-208ENST00000588274 SLC5A7Q9GZV3 580 aa10.04□□□□□ -0.8
CLPTM1-208ENST00000588274 TXNL4BQ9NX01 149 aaKnown RBP10.04□□□□□ -0.8
CLPTM1-208ENST00000588274 RHBDL2Q9NX52 303 aa10.04□□□□□ -0.8
CLPTM1-208ENST00000588274 IGHV3-49A0A0A0MS15 119 aa10.03□□□□□ -0.8
CLPTM1-208ENST00000588274 I3L2K1 104 aa10.03□□□□□ -0.8
CLPTM1-208ENST00000588274 SCGNO76038 276 aa10.03□□□□□ -0.8
CLPTM1-208ENST00000588274 GNRHRP30968 328 aa10.03□□□□□ -0.8
CLPTM1-208ENST00000588274 ARPC4P59998 168 aa10.03□□□□□ -0.8
CLPTM1-208ENST00000588274 CATR1Q13166 79 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms