RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 FAM168AQ92567 244 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 ANAPC16Q96DE5 110 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 NEIL1Q96FI4 390 aaPredicted RBP11.99□□□□□ -0.49
CCDC43-203ENST00000588210 PRDM13Q9H4Q3 707 aa11.99□□□□□ -0.49
CCDC43-203ENST00000588210 IGHV3-43A0A0B4J1X8 118 aa11.98□□□□□ -0.49
CCDC43-203ENST00000588210 NDUFS8O00217 210 aa11.98□□□□□ -0.49
CCDC43-203ENST00000588210 SPINT2O43291 252 aa11.98□□□□□ -0.49
CCDC43-203ENST00000588210 SOX15O60248 233 aa11.98□□□□□ -0.49
CCDC43-203ENST00000588210 VENTXO95231 258 aa11.98□□□□□ -0.49
CCDC43-203ENST00000588210 HRASP01112 189 aa11.98□□□□□ -0.49
CCDC43-203ENST00000588210 IGHV3-43DP0DP04 118 aa11.98□□□□□ -0.49
CCDC43-203ENST00000588210 GALR1P47211 349 aa11.98□□□□□ -0.49
CCDC43-203ENST00000588210 TMEM249Q2WGJ8 235 aa11.98□□□□□ -0.49
CCDC43-203ENST00000588210 ACOT6Q3I5F7 207 aaPredicted RBP11.98□□□□□ -0.49
CCDC43-203ENST00000588210 Q8N7P7 452 aa11.98□□□□□ -0.49
CCDC43-203ENST00000588210 R3HDM4Q96D70 268 aa11.98□□□□□ -0.49
CCDC43-203ENST00000588210 OR5B12Q96R08 314 aa11.98□□□□□ -0.49
CCDC43-203ENST00000588210 SAP30LQ9HAJ7 183 aa11.98□□□□□ -0.49
CCDC43-203ENST00000588210 UFSP2Q9NUQ7 469 aa11.98□□□□□ -0.49
CCDC43-203ENST00000588210 IL19Q9UHD0 177 aa11.98□□□□□ -0.49
CCDC43-203ENST00000588210 PSG11Q9UQ72 335 aa11.98□□□□□ -0.49
CCDC43-203ENST00000588210 WDR83OSQ9Y284 106 aa11.98□□□□□ -0.49
CCDC43-203ENST00000588210 TET2Q6N021 2002 aaPredicted RBP11.98□□□□□ -0.49
CCDC43-203ENST00000588210 RBMXL2O75526 392 aaKnown RBP11.98□□□□□ -0.49
CCDC43-203ENST00000588210 FABP4P15090 132 aa11.98□□□□□ -0.49
CCDC43-203ENST00000588210 CDC34P49427 236 aaPredicted RBP11.98□□□□□ -0.49
CCDC43-203ENST00000588210 TNFAIP6P98066 277 aaPredicted RBP11.98□□□□□ -0.49
CCDC43-203ENST00000588210 TMEM183AQ8IXX5 376 aa11.98□□□□□ -0.49
CCDC43-203ENST00000588210 TPRX1Q8N7U7 411 aa11.98□□□□□ -0.49
CCDC43-203ENST00000588210 GAB2Q9UQC2 676 aa11.98□□□□□ -0.49
CCDC43-203ENST00000588210 GYPAP02724 150 aa11.97□□□□□ -0.49
CCDC43-203ENST00000588210 DUTP33316 252 aaKnown RBP11.97□□□□□ -0.49
CCDC43-203ENST00000588210 RPS16P62249 146 aaKnown RBP11.97□□□□□ -0.49
CCDC43-203ENST00000588210 SPINK9Q5DT21 86 aa11.97□□□□□ -0.49
CCDC43-203ENST00000588210 CD177Q8N6Q3 437 aa11.97□□□□□ -0.49
CCDC43-203ENST00000588210 C10orf105Q8TEF2 133 aa11.97□□□□□ -0.49
CCDC43-203ENST00000588210 RAB1CQ92928 201 aa11.97□□□□□ -0.49
CCDC43-203ENST00000588210 PACRGQ96M98 296 aaPredicted RBP11.97□□□□□ -0.49
CCDC43-203ENST00000588210 HIST1H2BLQ99880 126 aa11.97□□□□□ -0.49
CCDC43-203ENST00000588210 QTRT1Q9BXR0 403 aaKnown RBP11.97□□□□□ -0.49
CCDC43-203ENST00000588210 GFOD1Q9NXC2 390 aa11.97□□□□□ -0.49
CCDC43-203ENST00000588210 OR6C3Q9NZP0 311 aa11.97□□□□□ -0.49
CCDC43-203ENST00000588210 ZNF469Q96JG9 3925 aaPredicted RBP11.96□□□□□ -0.49
CCDC43-203ENST00000588210 PAGE4O60829 102 aa11.96□□□□□ -0.49
CCDC43-203ENST00000588210 OR9G9P0C7N8 305 aa11.96□□□□□ -0.49
CCDC43-203ENST00000588210 TNFRSF1AP19438 455 aa11.96□□□□□ -0.49
CCDC43-203ENST00000588210 COL8A2P25067 703 aa11.96□□□□□ -0.49
CCDC43-203ENST00000588210 MZT1Q08AG7 82 aa11.96□□□□□ -0.49
CCDC43-203ENST00000588210 COA6Q5JTJ3 125 aaKnown RBP11.96□□□□□ -0.49
CCDC43-203ENST00000588210 LRRC29Q8WV35 223 aa11.96□□□□□ -0.49
CCDC43-203ENST00000588210 CHODLQ9H9P2 273 aa11.96□□□□□ -0.49
CCDC43-203ENST00000588210 JPT1Q9UK76 154 aa11.96□□□□□ -0.49
CCDC43-203ENST00000588210 IGHV4-30-2A0A087WSY4 118 aa11.96□□□□□ -0.5
CCDC43-203ENST00000588210 IGHV1-69-2A0A0G2JMI3 117 aa11.96□□□□□ -0.5
CCDC43-203ENST00000588210 PPP5D1E7EU14 171 aa11.96□□□□□ -0.5
CCDC43-203ENST00000588210 HPRT1P00492 218 aa11.96□□□□□ -0.5
CCDC43-203ENST00000588210 RD3LP0DJH9 198 aa11.96□□□□□ -0.5
CCDC43-203ENST00000588210 SLC25A16P16260 332 aa11.96□□□□□ -0.5
CCDC43-203ENST00000588210 GZMHP20718 246 aa11.96□□□□□ -0.5
CCDC43-203ENST00000588210 GPR12P47775 334 aa11.96□□□□□ -0.5
CCDC43-203ENST00000588210 FAM3BP58499 235 aaPredicted RBP11.96□□□□□ -0.5
CCDC43-203ENST00000588210 LINC00205P59089 165 aa11.96□□□□□ -0.5
CCDC43-203ENST00000588210 C9orf152Q5JTZ5 239 aa11.96□□□□□ -0.5
CCDC43-203ENST00000588210 NECAP1Q8NC96 275 aa11.96□□□□□ -0.5
CCDC43-203ENST00000588210 RFESDQ8TAC1 157 aa11.96□□□□□ -0.5
CCDC43-203ENST00000588210 OR2V2Q96R30 315 aa11.96□□□□□ -0.5
CCDC43-203ENST00000588210 PIMREGQ9BSJ6 248 aa11.96□□□□□ -0.5
CCDC43-203ENST00000588210 DSCAML1Q8TD84 2053 aa11.95□□□□□ -0.5
CCDC43-203ENST00000588210 TANC2Q9HCD6 1990 aa11.95□□□□□ -0.5
CCDC43-203ENST00000588210 C11orf94C9JXX5 98 aa11.95□□□□□ -0.5
CCDC43-203ENST00000588210 LYNX1G3V0Z9 82 aa11.95□□□□□ -0.5
CCDC43-203ENST00000588210 GGCTO75223 188 aaKnown RBP11.95□□□□□ -0.5
CCDC43-203ENST00000588210 MPDU1O75352 247 aa11.95□□□□□ -0.5
CCDC43-203ENST00000588210 TYMSP04818 313 aa11.95□□□□□ -0.5
CCDC43-203ENST00000588210 LYNX1P0DP58 116 aa11.95□□□□□ -0.5
CCDC43-203ENST00000588210 CD1BP29016 333 aa11.95□□□□□ -0.5
CCDC43-203ENST00000588210 SRP14P37108 136 aaKnown RBP11.95□□□□□ -0.5
CCDC43-203ENST00000588210 PDLIM3Q53GG5 364 aaPredicted RBP11.95□□□□□ -0.5
CCDC43-203ENST00000588210 OR52E5Q8NH55 327 aa11.95□□□□□ -0.5
CCDC43-203ENST00000588210 DCTN5Q9BTE1 182 aa11.95□□□□□ -0.5
CCDC43-203ENST00000588210 ELOVL1Q9BW60 279 aa11.95□□□□□ -0.5
CCDC43-203ENST00000588210 RBFOX2O43251 390 aaKnown RBP eCLIP11.95□□□□□ -0.5
CCDC43-203ENST00000588210 PDE6DO43924 150 aa11.95□□□□□ -0.5
CCDC43-203ENST00000588210 PRDX2P32119 198 aa11.95□□□□□ -0.5
CCDC43-203ENST00000588210 SPCS3P61009 180 aa11.95□□□□□ -0.5
CCDC43-203ENST00000588210 RPP30P78346 268 aaKnown RBP11.95□□□□□ -0.5
CCDC43-203ENST00000588210 CR1LQ2VPA4 569 aa11.95□□□□□ -0.5
CCDC43-203ENST00000588210 FAM90A1Q86YD7 464 aa11.95□□□□□ -0.5
CCDC43-203ENST00000588210 OR1P1Q8NH06 330 aa11.95□□□□□ -0.5
CCDC43-203ENST00000588210 OR5R1Q8NH85 324 aa11.95□□□□□ -0.5
CCDC43-203ENST00000588210 TMEM170AQ8WVE7 144 aa11.95□□□□□ -0.5
CCDC43-203ENST00000588210 ITLN1Q8WWA0 313 aa11.95□□□□□ -0.5
CCDC43-203ENST00000588210 TMUB1Q9BVT8 246 aa11.95□□□□□ -0.5
CCDC43-203ENST00000588210 VWC2LB2RUY7 222 aa11.94□□□□□ -0.5
CCDC43-203ENST00000588210 SRRM5B3KS81 715 aa11.94□□□□□ -0.5
CCDC43-203ENST00000588210 TMPRSS2O15393 492 aa11.94□□□□□ -0.5
CCDC43-203ENST00000588210 PROP1O75360 226 aa11.94□□□□□ -0.5
CCDC43-203ENST00000588210 CD99P14209 185 aa11.94□□□□□ -0.5
CCDC43-203ENST00000588210 EGR1P18146 543 aa11.94□□□□□ -0.5
CCDC43-203ENST00000588210 NPPCP23582 126 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms