RNA–Protein interactions for RNA: ENST00000586435.1

LIG3-209, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-209ENST00000586435 CEMP1Q6PRD7 247 aaPredicted RBP8.81□□□□□ -1
LIG3-209ENST00000586435 GVQW1Q8N7I0 195 aa8.81□□□□□ -1
LIG3-209ENST00000586435 FCGR1BQ92637 280 aa8.81□□□□□ -1
LIG3-209ENST00000586435 SLC25A38Q96DW6 304 aa8.81□□□□□ -1
LIG3-209ENST00000586435 BSCL2Q96G97 398 aaPredicted RBP8.81□□□□□ -1
LIG3-209ENST00000586435 QTRT1Q9BXR0 403 aaKnown RBP8.81□□□□□ -1
LIG3-209ENST00000586435 SLC5A7Q9GZV3 580 aa8.81□□□□□ -1
LIG3-209ENST00000586435 TMEM140Q9NV12 185 aa8.81□□□□□ -1
LIG3-209ENST00000586435 RRP15Q9Y3B9 282 aaKnown RBP8.81□□□□□ -1
LIG3-209ENST00000586435 KMT2AQ03164 3969 aa8.81□□□□□ -1
LIG3-209ENST00000586435 IGHV3-35A0A0C4DH35 117 aa8.8□□□□□ -1
LIG3-209ENST00000586435 SULT1C2O00338 296 aa8.8□□□□□ -1
LIG3-209ENST00000586435 NDUFA4O00483 81 aa8.8□□□□□ -1
LIG3-209ENST00000586435 SERPINE2P07093 398 aa8.8□□□□□ -1
LIG3-209ENST00000586435 DEFB135Q30KP9 77 aa8.8□□□□□ -1
LIG3-209ENST00000586435 LAMTOR1Q6IAA8 161 aa8.8□□□□□ -1
LIG3-209ENST00000586435 ZNF818PQ6ZRF7 136 aa8.8□□□□□ -1
LIG3-209ENST00000586435 CADM3Q8N126 398 aa8.8□□□□□ -1
LIG3-209ENST00000586435 TMEM217Q8N7C4 229 aa8.8□□□□□ -1
LIG3-209ENST00000586435 GIMAP1Q8WWP7 306 aa8.8□□□□□ -1
LIG3-209ENST00000586435 BORCS5Q969J3 196 aa8.8□□□□□ -1
LIG3-209ENST00000586435 RNF183Q96D59 192 aa8.8□□□□□ -1
LIG3-209ENST00000586435 RAB26Q9ULW5 256 aa8.8□□□□□ -1
LIG3-209ENST00000586435 SSR3Q9UNL2 185 aa8.8□□□□□ -1
LIG3-209ENST00000586435 KLK5Q9Y337 293 aaPredicted RBP8.8□□□□□ -1
LIG3-209ENST00000586435 FRAS1Q86XX4 4008 aa8.8□□□□□ -1
LIG3-209ENST00000586435 TRAV18A0A075B6X5 111 aa8.79□□□□□ -1
LIG3-209ENST00000586435 OR4C46A6NHA9 309 aa8.79□□□□□ -1
LIG3-209ENST00000586435 K7EMT4 169 aa8.79□□□□□ -1
LIG3-209ENST00000586435 S1PR2O95136 353 aa8.79□□□□□ -1
LIG3-209ENST00000586435 PTHLHP12272 177 aa8.79□□□□□ -1
LIG3-209ENST00000586435 PSMB9P28065 219 aa8.79□□□□□ -1
LIG3-209ENST00000586435 WT1-ASQ06250 92 aa8.79□□□□□ -1
LIG3-209ENST00000586435 SPARTQ8N0X7 666 aa8.79□□□□□ -1
LIG3-209ENST00000586435 STPG3Q8N7X2 389 aa8.79□□□□□ -1
LIG3-209ENST00000586435 DMBX1Q8NFW5 382 aa8.79□□□□□ -1
LIG3-209ENST00000586435 OR5AP2Q8NGF4 316 aa8.79□□□□□ -1
LIG3-209ENST00000586435 OR10W1Q8NGF6 305 aa8.79□□□□□ -1
LIG3-209ENST00000586435 OR5H6Q8NGV6 325 aa8.79□□□□□ -1
LIG3-209ENST00000586435 GALNT14Q96FL9 552 aa8.79□□□□□ -1
LIG3-209ENST00000586435 UBQLN2Q9UHD9 624 aa8.79□□□□□ -1
LIG3-209ENST00000586435 F11RQ9Y624 299 aaKnown RBP8.79□□□□□ -1
LIG3-209ENST00000586435 OR2T8A6NH00 312 aa8.78□□□□□ -1
LIG3-209ENST00000586435 MARCH11A6NNE9 402 aa8.78□□□□□ -1
LIG3-209ENST00000586435 F8W735 103 aaPredicted RBP8.78□□□□□ -1
LIG3-209ENST00000586435 TMEM127O75204 238 aa8.78□□□□□ -1
LIG3-209ENST00000586435 TRAPPC2P0DI81 140 aa8.78□□□□□ -1
LIG3-209ENST00000586435 TRAPPC2BP0DI82 140 aa8.78□□□□□ -1
LIG3-209ENST00000586435 OR13C7P0DN81 318 aa8.78□□□□□ -1
LIG3-209ENST00000586435 SDC2P34741 201 aa8.78□□□□□ -1
LIG3-209ENST00000586435 CBX5P45973 191 aa8.78□□□□□ -1
LIG3-209ENST00000586435 FXYD4P59646 89 aa8.78□□□□□ -1
LIG3-209ENST00000586435 ERVK-16P61578 105 aa8.78□□□□□ -1
LIG3-209ENST00000586435 AADACL3Q5VUY0 350 aa8.78□□□□□ -1
LIG3-209ENST00000586435 OR1L8Q8NGR8 309 aa8.78□□□□□ -1
LIG3-209ENST00000586435 OR51H1Q8NH63 302 aa8.78□□□□□ -1
LIG3-209ENST00000586435 LSM10Q969L4 123 aaKnown RBP8.78□□□□□ -1
LIG3-209ENST00000586435 AUNIPQ9H7T9 357 aa8.78□□□□□ -1
LIG3-209ENST00000586435 MAP6D1Q9H9H5 199 aa8.78□□□□□ -1
LIG3-209ENST00000586435 NDUFA4L2Q9NRX3 87 aa8.78□□□□□ -1
LIG3-209ENST00000586435 C21orf62Q9NYP8 219 aa8.78□□□□□ -1
LIG3-209ENST00000586435 TEX50A0A1B0GTY4 177 aa8.77□□□□□ -1.01
LIG3-209ENST00000586435 C15orf62A8K5M9 175 aa8.77□□□□□ -1.01
LIG3-209ENST00000586435 F2RP25116 425 aa8.77□□□□□ -1.01
LIG3-209ENST00000586435 GNRHRP30968 328 aa8.77□□□□□ -1.01
LIG3-209ENST00000586435 ADMP35318 185 aa8.77□□□□□ -1.01
LIG3-209ENST00000586435 MFAP2P55001 183 aa8.77□□□□□ -1.01
LIG3-209ENST00000586435 SLC25A24Q6NUK1 477 aa8.77□□□□□ -1.01
LIG3-209ENST00000586435 TMEM17Q86X19 198 aa8.77□□□□□ -1.01
LIG3-209ENST00000586435 SCARB1Q8WTV0 552 aa8.77□□□□□ -1.01
LIG3-209ENST00000586435 CHRDL1Q9BU40 450 aa8.77□□□□□ -1.01
LIG3-209ENST00000586435 DIABLOQ9NR28 239 aa8.77□□□□□ -1.01
LIG3-209ENST00000586435 K7EIM0 57 aa8.76□□□□□ -1.01
LIG3-209ENST00000586435 RPA2P15927 270 aa8.76□□□□□ -1.01
LIG3-209ENST00000586435 HERV-K104P61576 105 aa8.76□□□□□ -1.01
LIG3-209ENST00000586435 MXD1Q05195 221 aa8.76□□□□□ -1.01
LIG3-209ENST00000586435 DHRS11Q6UWP2 260 aa8.76□□□□□ -1.01
LIG3-209ENST00000586435 OR5B3Q8NH48 314 aa8.76□□□□□ -1.01
LIG3-209ENST00000586435 MOB3AQ96BX8 217 aa8.76□□□□□ -1.01
LIG3-209ENST00000586435 C6orf62Q9GZU0 229 aaPredicted RBP8.76□□□□□ -1.01
LIG3-209ENST00000586435 ANAPC10Q9UM13 185 aa8.76□□□□□ -1.01
LIG3-209ENST00000586435 PGLYRP1O75594 196 aaPredicted RBP8.75□□□□□ -1.01
LIG3-209ENST00000586435 RLN1P04808 185 aa8.75□□□□□ -1.01
LIG3-209ENST00000586435 CTSDP07339 412 aaPredicted RBP8.75□□□□□ -1.01
LIG3-209ENST00000586435 CLEC2LP0C7M8 214 aa8.75□□□□□ -1.01
LIG3-209ENST00000586435 RPL35AP18077 110 aaKnown RBP8.75□□□□□ -1.01
LIG3-209ENST00000586435 FCGR2BP31994 310 aaPredicted RBP8.75□□□□□ -1.01
LIG3-209ENST00000586435 CMC4P56277 68 aaPredicted RBP8.75□□□□□ -1.01
LIG3-209ENST00000586435 IDNKQ5T6J7 187 aa8.75□□□□□ -1.01
LIG3-209ENST00000586435 LGALS9CQ6DKI2 356 aa8.75□□□□□ -1.01
LIG3-209ENST00000586435 GATAD1Q8WUU5 269 aa8.75□□□□□ -1.01
LIG3-209ENST00000586435 PHLDA1Q8WV24 401 aaPredicted RBP8.75□□□□□ -1.01
LIG3-209ENST00000586435 ZNF414Q96IQ9 312 aa8.75□□□□□ -1.01
LIG3-209ENST00000586435 OR10C1Q96KK4 312 aa8.75□□□□□ -1.01
LIG3-209ENST00000586435 TMEM56Q96MV1 263 aa8.75□□□□□ -1.01
LIG3-209ENST00000586435 C20orf24Q9BUV8 137 aa8.75□□□□□ -1.01
LIG3-209ENST00000586435 YTHDF1Q9BYJ9 559 aaKnown RBP8.75□□□□□ -1.01
LIG3-209ENST00000586435 EHFQ9NZC4 300 aa8.75□□□□□ -1.01
LIG3-209ENST00000586435 SMPXQ9UHP9 88 aa8.75□□□□□ -1.01
LIG3-209ENST00000586435 PRNDQ9UKY0 176 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms