RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 CREBL2O60519 120 aaPredicted RBP13.5□□□□□ -0.25
TOP3A-220ENST00000585031 APELAP0DMC3 54 aa13.5□□□□□ -0.25
TOP3A-220ENST00000585031 MC5RP33032 325 aa13.5□□□□□ -0.25
TOP3A-220ENST00000585031 TSPAN5P62079 268 aa13.5□□□□□ -0.25
TOP3A-220ENST00000585031 TNFRSF9Q07011 255 aa13.5□□□□□ -0.25
TOP3A-220ENST00000585031 HMGN3Q15651 99 aa13.5□□□□□ -0.25
TOP3A-220ENST00000585031 MRGPRG-AS1Q2M3A8 158 aa13.5□□□□□ -0.25
TOP3A-220ENST00000585031 OR5AP2Q8NGF4 316 aa13.5□□□□□ -0.25
TOP3A-220ENST00000585031 GALMQ96C23 342 aa13.5□□□□□ -0.25
TOP3A-220ENST00000585031 RIMS4Q9H426 269 aaPredicted RBP13.5□□□□□ -0.25
TOP3A-220ENST00000585031 CHMP1AQ9HD42 196 aaPredicted RBP13.5□□□□□ -0.25
TOP3A-220ENST00000585031 PIPOXQ9P0Z9 390 aa13.5□□□□□ -0.25
TOP3A-220ENST00000585031 MSGN1A6NI15 193 aa13.49□□□□□ -0.25
TOP3A-220ENST00000585031 RAB29O14966 203 aa13.49□□□□□ -0.25
TOP3A-220ENST00000585031 SSNA1O43805 119 aa13.49□□□□□ -0.25
TOP3A-220ENST00000585031 IGLV2-23P01705 113 aa13.49□□□□□ -0.25
TOP3A-220ENST00000585031 CRYGBP07316 175 aa13.49□□□□□ -0.25
TOP3A-220ENST00000585031 FCGR3AP08637 254 aa13.49□□□□□ -0.25
TOP3A-220ENST00000585031 AADACP22760 399 aa13.49□□□□□ -0.25
TOP3A-220ENST00000585031 KIR2DS2P43631 304 aa13.49□□□□□ -0.25
TOP3A-220ENST00000585031 CDK10Q15131 360 aa13.49□□□□□ -0.25
TOP3A-220ENST00000585031 ZNF383Q8NA42 475 aa13.49□□□□□ -0.25
TOP3A-220ENST00000585031 OR6F1Q8NGZ6 308 aa13.49□□□□□ -0.25
TOP3A-220ENST00000585031 KRTAP4-5Q9BYR2 181 aa13.49□□□□□ -0.25
TOP3A-220ENST00000585031 EHFQ9NZC4 300 aa13.49□□□□□ -0.25
TOP3A-220ENST00000585031 PEMTQ9UBM1 199 aa13.49□□□□□ -0.25
TOP3A-220ENST00000585031 ATF4P18848 351 aaPredicted RBP13.48□□□□□ -0.25
TOP3A-220ENST00000585031 EIF2B2P49770 351 aaKnown RBP13.48□□□□□ -0.25
TOP3A-220ENST00000585031 RPS16P62249 146 aaKnown RBP13.48□□□□□ -0.25
TOP3A-220ENST00000585031 WFDC3Q8IUB2 231 aa13.48□□□□□ -0.25
TOP3A-220ENST00000585031 IL1F10Q8WWZ1 152 aa13.48□□□□□ -0.25
TOP3A-220ENST00000585031 GGTLC1Q9BX51 225 aa13.48□□□□□ -0.25
TOP3A-220ENST00000585031 ZNF230Q9UIE0 474 aaPredicted RBP13.48□□□□□ -0.25
TOP3A-220ENST00000585031 ANXA10Q9UJ72 324 aa13.48□□□□□ -0.25
TOP3A-220ENST00000585031 DMRT1Q9Y5R6 373 aa13.48□□□□□ -0.25
TOP3A-220ENST00000585031 HSPG2P98160 4391 aa13.48□□□□□ -0.25
TOP3A-220ENST00000585031 C2orf70A6NJV1 201 aa13.47□□□□□ -0.25
TOP3A-220ENST00000585031 FOLR2P14207 255 aa13.47□□□□□ -0.25
TOP3A-220ENST00000585031 ANXA7P20073 488 aaKnown RBP13.47□□□□□ -0.25
TOP3A-220ENST00000585031 TAS2R31P59538 309 aa13.47□□□□□ -0.25
TOP3A-220ENST00000585031 OR13C8Q8NGS7 320 aa13.47□□□□□ -0.25
TOP3A-220ENST00000585031 TERB2Q8NHR7 220 aa13.47□□□□□ -0.25
TOP3A-220ENST00000585031 CACNG8Q8WXS5 425 aa13.47□□□□□ -0.25
TOP3A-220ENST00000585031 USMG5Q96IX5 58 aa13.47□□□□□ -0.25
TOP3A-220ENST00000585031 HDHD3Q9BSH5 251 aaPredicted RBP13.47□□□□□ -0.25
TOP3A-220ENST00000585031 COA4Q9NYJ1 87 aa13.47□□□□□ -0.25
TOP3A-220ENST00000585031 SPDEFO95238 335 aa13.46□□□□□ -0.25
TOP3A-220ENST00000585031 HLA-AP01891 365 aaKnown RBP13.46□□□□□ -0.25
TOP3A-220ENST00000585031 PRH1P02810 166 aa13.46□□□□□ -0.25
TOP3A-220ENST00000585031 C4orf46Q504U0 113 aa13.46□□□□□ -0.25
TOP3A-220ENST00000585031 Q6ZS49 121 aa13.46□□□□□ -0.25
TOP3A-220ENST00000585031 TCTE3Q8IZS6 198 aa13.46□□□□□ -0.25
TOP3A-220ENST00000585031 MAFIPQ8WZ33 124 aa13.46□□□□□ -0.25
TOP3A-220ENST00000585031 ST6GAL2Q96JF0 529 aa13.46□□□□□ -0.25
TOP3A-220ENST00000585031 TSNAXQ99598 290 aaKnown RBP13.46□□□□□ -0.25
TOP3A-220ENST00000585031 SEC22CQ9BRL7 303 aa13.46□□□□□ -0.25
TOP3A-220ENST00000585031 LOC102724200A0A096LPH7 203 aaPredicted RBP13.45□□□□□ -0.26
TOP3A-220ENST00000585031 A0A1B0GVY2 172 aa13.45□□□□□ -0.26
TOP3A-220ENST00000585031 UBE2MP61081 183 aaKnown RBP13.45□□□□□ -0.26
TOP3A-220ENST00000585031 CD300CQ08708 224 aa13.45□□□□□ -0.26
TOP3A-220ENST00000585031 FCN2Q15485 313 aa13.45□□□□□ -0.26
TOP3A-220ENST00000585031 SURF2Q15527 256 aaPredicted RBP13.45□□□□□ -0.26
TOP3A-220ENST00000585031 ZFP69Q49AA0 526 aa13.45□□□□□ -0.26
TOP3A-220ENST00000585031 TMED4Q7Z7H5 227 aa13.45□□□□□ -0.26
TOP3A-220ENST00000585031 ADAD2Q8NCV1 583 aaKnown RBP13.45□□□□□ -0.26
TOP3A-220ENST00000585031 DYNLRB2Q8TF09 96 aa13.45□□□□□ -0.26
TOP3A-220ENST00000585031 PHLDA1Q8WV24 401 aaPredicted RBP13.45□□□□□ -0.26
TOP3A-220ENST00000585031 OR1A1Q9P1Q5 309 aa13.45□□□□□ -0.26
TOP3A-220ENST00000585031 MGAT4AQ9UM21 535 aa13.45□□□□□ -0.26
TOP3A-220ENST00000585031 TRBV6-6A0A0A6YYG2 114 aa13.44□□□□□ -0.26
TOP3A-220ENST00000585031 PPP5D1E7EU14 171 aa13.44□□□□□ -0.26
TOP3A-220ENST00000585031 NDUFB8O95169 186 aa13.44□□□□□ -0.26
TOP3A-220ENST00000585031 SULT1A3P0DMM9 295 aa13.44□□□□□ -0.26
TOP3A-220ENST00000585031 SULT1A4P0DMN0 295 aa13.44□□□□□ -0.26
TOP3A-220ENST00000585031 ANXA3P12429 323 aa13.44□□□□□ -0.26
TOP3A-220ENST00000585031 ZNF880Q6PDB4 577 aa13.44□□□□□ -0.26
TOP3A-220ENST00000585031 MOB1BQ7L9L4 216 aa13.44□□□□□ -0.26
TOP3A-220ENST00000585031 TMEM61Q8N0U2 210 aa13.44□□□□□ -0.26
TOP3A-220ENST00000585031 ZNF431Q8TF32 576 aaPredicted RBP13.44□□□□□ -0.26
TOP3A-220ENST00000585031 SRRM4A7MD48 611 aaKnown RBP13.43□□□□□ -0.26
TOP3A-220ENST00000585031 SPRY2O43597 315 aa13.43□□□□□ -0.26
TOP3A-220ENST00000585031 NAPSAO96009 420 aa13.43□□□□□ -0.26
TOP3A-220ENST00000585031 CTXN2P0C2S0 81 aa13.43□□□□□ -0.26
TOP3A-220ENST00000585031 OR4E1P0C645 316 aa13.43□□□□□ -0.26
TOP3A-220ENST00000585031 PGAM2P15259 253 aa13.43□□□□□ -0.26
TOP3A-220ENST00000585031 LGALS7P47929 136 aa13.43□□□□□ -0.26
TOP3A-220ENST00000585031 RHOGP84095 191 aa13.43□□□□□ -0.26
TOP3A-220ENST00000585031 EXOSC2Q13868 293 aaKnown RBP13.43□□□□□ -0.26
TOP3A-220ENST00000585031 DEFB135Q30KP9 77 aa13.43□□□□□ -0.26
TOP3A-220ENST00000585031 SLC25A42Q86VD7 318 aa13.43□□□□□ -0.26
TOP3A-220ENST00000585031 LHFPL1Q86WI0 220 aa13.43□□□□□ -0.26
TOP3A-220ENST00000585031 MARCH1Q8TCQ1 289 aa13.43□□□□□ -0.26
TOP3A-220ENST00000585031 Q9N2K0 584 aa13.43□□□□□ -0.26
TOP3A-220ENST00000585031 MLXQ9UH92 298 aa13.43□□□□□ -0.26
TOP3A-220ENST00000585031 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.42□□□□□ -0.26
TOP3A-220ENST00000585031 SLC16A13Q7RTY0 426 aa13.42□□□□□ -0.26
TOP3A-220ENST00000585031 TMEM68Q96MH6 324 aa13.42□□□□□ -0.26
TOP3A-220ENST00000585031 TECRQ9NZ01 308 aaKnown RBP13.42□□□□□ -0.26
TOP3A-220ENST00000585031 MGAT4CQ9UBM8 478 aa13.42□□□□□ -0.26
TOP3A-220ENST00000585031 C14orf166Q9Y224 244 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms