RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-234	ENST00000584525	SOX15	O60248	233 aa		10.11	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	B3GALNT1	O75752	331 aa		10.11	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	LGALS1	P09382	135 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	SPN	P16150	400 aa		10.11	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	KIAA0141	Q14154	515 aa	Predicted RBP	10.11	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	POU2AF1	Q16633	256 aa		10.11	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	THOC7	Q6I9Y2	204 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	CCDC190	Q86UF4	302 aa		10.11	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	SGPP2	Q8IWX5	399 aa		10.11	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	OR6Q1	Q8NGQ2	317 aa		10.11	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	MYOZ3	Q8TDC0	251 aa		10.11	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	RRNAD1	Q96FB5	475 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	PRND	Q9UKY0	176 aa		10.11	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	KCNIP3	Q9Y2W7	256 aa		10.11	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525		V9GYH0	126 aa		10.11	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	HMX3	A6NHT5	357 aa		10.1	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	CENPX	A8MT69	81 aa		10.1	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	LINC01619	G3V211	115 aa		10.1	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	TRAPPC2	P0DI81	140 aa		10.1	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	TRAPPC2B	P0DI82	140 aa		10.1	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	ANXA3	P12429	323 aa		10.1	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	GP9	P14770	177 aa		10.1	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	BRWD1-AS2	P59051	145 aa		10.1	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	RUNX1	Q01196	453 aa		10.1	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	C19orf54	Q5BKX5	351 aa		10.1	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	MRGPRF	Q96AM1	343 aa		10.1	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	USMG5	Q96IX5	58 aa		10.1	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	TMEM56	Q96MV1	263 aa		10.1	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	CITED4	Q96RK1	184 aa		10.1	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	QTRT1	Q9BXR0	403 aa	Known RBP	10.1	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	ZNF257	Q9Y2Q1	563 aa		10.1	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	OR51B2	Q9Y5P1	312 aa		10.1	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	FAM223B	A6NKX1	122 aa		10.09	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	HIST1H1B	P16401	226 aa	Known RBP	10.09	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	OR2B8P	P59922	312 aa		10.09	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	SSBP2	P81877	361 aa	Predicted RBP	10.09	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	ATP5G2	Q06055	141 aa		10.09	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	10.09	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	FAM223A	Q8IWN6	122 aa		10.09	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	GDPD1	Q8N9F7	314 aa		10.09	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	OR1L8	Q8NGR8	309 aa		10.09	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	DEDD2	Q8WXF8	326 aa		10.09	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	DLX4	Q92988	240 aa	Predicted RBP	10.09	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	SOST	Q9BQB4	213 aa		10.09	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	ALX4	Q9H161	411 aa	Predicted RBP	10.09	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	NAA60	Q9H7X0	242 aa		10.09	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	RANGRF	Q9HD47	186 aa	Predicted RBP	10.09	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	SLC2A8	Q9NY64	477 aa		10.09	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	THYN1	Q9P016	225 aa		10.09	□□□□□ -0.79
CDK5RAP3-234	ENST00000584525	TRAV3	A0A0B4J244	114 aa		10.08	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	PIGBOS1	A0A0B4J2F0	54 aa		10.08	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	ANKRD34B	A5PLL1	514 aa		10.08	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	NPIPB5	A8MRT5	1133 aa		10.08	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	OR2J3	O76001	311 aa		10.08	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	HSPB1	P04792	205 aa	Known RBP	10.08	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	REG1A	P05451	166 aa		10.08	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	ZNF735	P0CB33	412 aa		10.08	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	AKR1C4	P17516	323 aa		10.08	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	ETV6	P41212	452 aa		10.08	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	SLURP1	P55000	103 aa		10.08	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	RHOG	P84095	191 aa		10.08	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	DHODH	Q02127	395 aa		10.08	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	ZNF79	Q15937	498 aa		10.08	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	TATDN3	Q17R31	274 aa		10.08	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	ZNF585B	Q52M93	769 aa		10.08	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	TMED4	Q7Z7H5	227 aa		10.08	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	TTC9C	Q8N5M4	171 aa		10.08	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	ADAD2	Q8NCV1	583 aa	Known RBP	10.08	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	LSM10	Q969L4	123 aa	Known RBP	10.08	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	SRSF8	Q9BRL6	282 aa	Known RBP	10.08	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	NSG2	Q9Y328	171 aa		10.08	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	IGHV4OR15-8	A0A075B7B6	117 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525		A0A087WW49	117 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	LINC00854	A0A1B0GVQ3	168 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	NAP1L6	A6NFF2	107 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	C15orf61	A6NNL5	157 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	TEX22	C9J3V5	150 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	PRH1	P02810	166 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	IL6R	P08887	468 aa	Predicted RBP	10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	FGF2	P09038	288 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	OR5AC1	P0C628	307 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	MYOD1	P15172	320 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	ZP3	P21754	424 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	PSMB6	P28072	239 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	DEFA5	Q01523	94 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	ZNF45	Q02386	682 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	EXOSC2	Q13868	293 aa	Known RBP	10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	KLF9	Q13886	244 aa	Predicted RBP	10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	MRGPRG-AS1	Q2M3A8	158 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	SP6	Q3SY56	376 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	FAM209B	Q5JX69	171 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	SLC35G3	Q8N808	338 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	OR5B3	Q8NH48	314 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	TRIM63	Q969Q1	353 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	TP53RK	Q96S44	253 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	LYST	Q99698	3801 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	SRR	Q9GZT4	340 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	ENY2	Q9NPA8	101 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	GPR132	Q9UNW8	380 aa		10.07	□□□□□ -0.8
CDK5RAP3-234	ENST00000584525	TEX50	A0A1B0GTY4	177 aa		10.06	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms