RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 POLR1DQ9Y2S0 133 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 NFAT5O94916 1531 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 KIF1BO60333 1816 aa1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 COL14A1Q05707 1796 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 MDC1Q14676 2089 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-205ENST00000581383 DISP2A7MBM2 1401 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 ROCK2O75116 1388 aaKnown RBP1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 EIF3AQ14152 1382 aaKnown RBP1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 PIK3C2AO00443 1686 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 A0A087WUU8 490 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 TRGV5A0A0B4J1U4 118 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 A0A1B0GVG6 124 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 M0QZ92 97 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 BHLHE40O14503 412 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 NPYP01303 97 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 APOEP02649 317 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 UCHL1P09936 223 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 CD24P25063 80 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 DDTP30046 118 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 RAP1GDS1P52306 607 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 ERHP84090 104 aaKnown RBP1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 RSU1Q15404 277 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 PLPPR5Q32ZL2 321 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 RASSF6Q6ZTQ3 369 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 GPHB5Q86YW7 130 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 OR2T27Q8NH04 317 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 DDI1Q8WTU0 396 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 CCL13Q99616 98 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 PRO2289Q9P1D8 64 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 CD163L1Q9NR16 1453 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 MARF1Q9Y4F3 1742 aaKnown RBP1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 RREB1Q92766 1687 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 QRICH2Q9H0J4 1663 aa1.74□□□□□ -2.13
SMCHD1-205ENST00000581383 CPDO75976 1380 aa1.73□□□□□ -2.13
SMCHD1-205ENST00000581383 ABCC6O95255 1503 aa1.73□□□□□ -2.13
SMCHD1-205ENST00000581383 TRAV41A0A0B4J266 112 aa1.73□□□□□ -2.13
SMCHD1-205ENST00000581383 C9JCJ5 164 aa1.73□□□□□ -2.13
SMCHD1-205ENST00000581383 H0Y980 276 aa1.73□□□□□ -2.13
SMCHD1-205ENST00000581383 CXCR6O00574 342 aa1.73□□□□□ -2.13
SMCHD1-205ENST00000581383 DEXIO95424 95 aa1.73□□□□□ -2.13
SMCHD1-205ENST00000581383 IL3P08700 152 aa1.73□□□□□ -2.13
SMCHD1-205ENST00000581383 C8orf88P0DMB2 117 aa1.73□□□□□ -2.13
SMCHD1-205ENST00000581383 RPL12P30050 165 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-205ENST00000581383 FAM78BQ5VT40 261 aa1.73□□□□□ -2.13
SMCHD1-205ENST00000581383 SBSNQ6UWP8 590 aa1.73□□□□□ -2.13
SMCHD1-205ENST00000581383 ZNF675Q8TD23 568 aa1.73□□□□□ -2.13
SMCHD1-205ENST00000581383 TIMM21Q9BVV7 248 aa1.73□□□□□ -2.13
SMCHD1-205ENST00000581383 USE1Q9NZ43 259 aa1.73□□□□□ -2.13
SMCHD1-205ENST00000581383 ANAPC10Q9UM13 185 aa1.73□□□□□ -2.13
SMCHD1-205ENST00000581383 HHLA3Q9XRX5 114 aa1.73□□□□□ -2.13
SMCHD1-205ENST00000581383 RGPD1P0DJD0 1748 aa1.73□□□□□ -2.13
SMCHD1-205ENST00000581383 NWD2Q9ULI1 1742 aa1.73□□□□□ -2.13
SMCHD1-205ENST00000581383 PAPPAQ13219 1627 aa1.73□□□□□ -2.13
SMCHD1-205ENST00000581383 TRPM1Q7Z4N2 1603 aa1.73□□□□□ -2.13
SMCHD1-205ENST00000581383 KTN1Q86UP2 1357 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-205ENST00000581383 RGPD8O14715 1765 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-205ENST00000581383 PEAK1Q9H792 1746 aa1.72□□□□□ -2.13
SMCHD1-205ENST00000581383 KIAA2026Q5HYC2 2103 aa1.72□□□□□ -2.13
SMCHD1-205ENST00000581383 TMSB15BA0A087X1C1 80 aa1.72□□□□□ -2.13
SMCHD1-205ENST00000581383 COX7A2LO14548 114 aa1.72□□□□□ -2.13
SMCHD1-205ENST00000581383 APOMO95445 188 aa1.72□□□□□ -2.13
SMCHD1-205ENST00000581383 CCR2P41597 374 aa1.72□□□□□ -2.13
SMCHD1-205ENST00000581383 PABPC1L2AQ5JQF8 200 aa1.72□□□□□ -2.13
SMCHD1-205ENST00000581383 Q6ZTI0 123 aa1.72□□□□□ -2.13
SMCHD1-205ENST00000581383 HIST2H3AQ71DI3 136 aa1.72□□□□□ -2.13
SMCHD1-205ENST00000581383 OR51T1Q8NGJ9 327 aa1.72□□□□□ -2.13
SMCHD1-205ENST00000581383 JOSD2Q8TAC2 188 aa1.72□□□□□ -2.13
SMCHD1-205ENST00000581383 LHFPL5Q8TAF8 219 aa1.72□□□□□ -2.13
SMCHD1-205ENST00000581383 GNPNAT1Q96EK6 184 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-205ENST00000581383 ZNF625Q96I27 306 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-205ENST00000581383 CXorf21Q9HAI6 301 aa1.72□□□□□ -2.13
SMCHD1-205ENST00000581383 FGFR1OP2Q9NVK5 253 aa1.72□□□□□ -2.13
SMCHD1-205ENST00000581383 NOSIPQ9Y314 301 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-205ENST00000581383 SIPA1L1O43166 1804 aa1.72□□□□□ -2.13
SMCHD1-205ENST00000581383 NSD3Q9BZ95 1437 aa1.72□□□□□ -2.13
SMCHD1-205ENST00000581383 CASZ1Q86V15 1759 aa1.72□□□□□ -2.13
SMCHD1-205ENST00000581383 ABCC12Q96J65 1359 aa1.72□□□□□ -2.13
SMCHD1-205ENST00000581383 PARP4Q9UKK3 1724 aaKnown RBP1.71□□□□□ -2.13
SMCHD1-205ENST00000581383 UNC79Q9P2D8 2635 aa1.71□□□□□ -2.13
SMCHD1-205ENST00000581383 EVC2Q86UK5 1308 aa1.71□□□□□ -2.14
SMCHD1-205ENST00000581383 NHSQ6T4R5 1651 aa1.71□□□□□ -2.14
SMCHD1-205ENST00000581383 WNK3Q9BYP7 1800 aa1.71□□□□□ -2.14
SMCHD1-205ENST00000581383 MAGEA2P43356 314 aa1.71□□□□□ -2.14
SMCHD1-205ENST00000581383 TAS2R20P59543 309 aa1.71□□□□□ -2.14
SMCHD1-205ENST00000581383 FKBP1AP62942 108 aaKnown RBP1.71□□□□□ -2.14
SMCHD1-205ENST00000581383 OGFRL1Q5TC84 451 aaPredicted RBP1.71□□□□□ -2.14
SMCHD1-205ENST00000581383 LRRN1Q6UXK5 716 aa1.71□□□□□ -2.14
SMCHD1-205ENST00000581383 LRRC28Q86X40 367 aaPredicted RBP1.71□□□□□ -2.14
SMCHD1-205ENST00000581383 UMODL1-AS1Q8N2C9 162 aa1.71□□□□□ -2.14
SMCHD1-205ENST00000581383 PIGXQ8TBF5 258 aa1.71□□□□□ -2.14
SMCHD1-205ENST00000581383 COQ4Q9Y3A0 265 aa1.71□□□□□ -2.14
SMCHD1-205ENST00000581383 AMMECR1Q9Y4X0 333 aaPredicted RBP1.71□□□□□ -2.14
SMCHD1-205ENST00000581383 ITSN1Q15811 1721 aa1.71□□□□□ -2.14
SMCHD1-205ENST00000581383 DOT1LQ8TEK3 1739 aa1.71□□□□□ -2.14
SMCHD1-205ENST00000581383 TONSLQ96HA7 1378 aa1.71□□□□□ -2.14
SMCHD1-205ENST00000581383 FAM208AQ9UK61 1670 aaKnown RBP1.71□□□□□ -2.14
SMCHD1-205ENST00000581383 ZFHX2Q9C0A1 2572 aaPredicted RBP1.7□□□□□ -2.14
SMCHD1-205ENST00000581383 ZNF532Q9HCE3 1301 aa1.7□□□□□ -2.14
SMCHD1-205ENST00000581383 UTRNP46939 3433 aa1.7□□□□□ -2.14
SMCHD1-205ENST00000581383 SIGLEC16A6NMB1 481 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms