RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 PTHLHP12272 177 aa10.9□□□□□ -0.66
SMARCE1-216ENST00000580419 UCP3P55916 312 aa10.9□□□□□ -0.66
SMARCE1-216ENST00000580419 TAS2R20P59543 309 aa10.9□□□□□ -0.66
SMARCE1-216ENST00000580419 AADACL3Q5VUY0 350 aa10.9□□□□□ -0.66
SMARCE1-216ENST00000580419 SAMD12Q8N8I0 201 aa10.9□□□□□ -0.66
SMARCE1-216ENST00000580419 DMBX1Q8NFW5 382 aa10.9□□□□□ -0.66
SMARCE1-216ENST00000580419 OR5H2Q8NGV7 314 aa10.9□□□□□ -0.66
SMARCE1-216ENST00000580419 GPX8Q8TED1 209 aa10.9□□□□□ -0.66
SMARCE1-216ENST00000580419 LSM10Q969L4 123 aaKnown RBP10.9□□□□□ -0.66
SMARCE1-216ENST00000580419 BSCL2Q96G97 398 aaPredicted RBP10.9□□□□□ -0.66
SMARCE1-216ENST00000580419 GPHA2Q96T91 129 aa10.9□□□□□ -0.66
SMARCE1-216ENST00000580419 GAR1Q9NY12 217 aaKnown RBP10.9□□□□□ -0.66
SMARCE1-216ENST00000580419 PLA2G2EQ9NZK7 142 aa10.9□□□□□ -0.66
SMARCE1-216ENST00000580419 UFC1Q9Y3C8 167 aa10.9□□□□□ -0.66
SMARCE1-216ENST00000580419 OR11H12B2RN74 326 aa10.89□□□□□ -0.67
SMARCE1-216ENST00000580419 GPR31O00270 319 aa10.89□□□□□ -0.67
SMARCE1-216ENST00000580419 S1PR2O95136 353 aa10.89□□□□□ -0.67
SMARCE1-216ENST00000580419 S100GP29377 79 aa10.89□□□□□ -0.67
SMARCE1-216ENST00000580419 FCGR2BP31994 310 aaPredicted RBP10.89□□□□□ -0.67
SMARCE1-216ENST00000580419 RFX2P48378 723 aa10.89□□□□□ -0.67
SMARCE1-216ENST00000580419 FXYD4P59646 89 aa10.89□□□□□ -0.67
SMARCE1-216ENST00000580419 TMEM17Q86X19 198 aa10.89□□□□□ -0.67
SMARCE1-216ENST00000580419 LYSMD2Q8IV50 215 aa10.89□□□□□ -0.67
SMARCE1-216ENST00000580419 TSPAN14Q8NG11 270 aa10.89□□□□□ -0.67
SMARCE1-216ENST00000580419 OR51H1Q8NH63 302 aa10.89□□□□□ -0.67
SMARCE1-216ENST00000580419 ZNF2Q9BSG1 426 aaPredicted RBP10.89□□□□□ -0.67
SMARCE1-216ENST00000580419 C5orf66Q9H5L9 145 aa10.89□□□□□ -0.67
SMARCE1-216ENST00000580419 PRNDQ9UKY0 176 aa10.89□□□□□ -0.67
SMARCE1-216ENST00000580419 TRAV3A0A0B4J244 114 aa10.88□□□□□ -0.67
SMARCE1-216ENST00000580419 TEX50A0A1B0GTY4 177 aa10.88□□□□□ -0.67
SMARCE1-216ENST00000580419 MFSD2BA6NFX1 497 aa10.88□□□□□ -0.67
SMARCE1-216ENST00000580419 K7EMT4 169 aa10.88□□□□□ -0.67
SMARCE1-216ENST00000580419 HLA-AP01891 365 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-216ENST00000580419 CD7P09564 240 aa10.88□□□□□ -0.67
SMARCE1-216ENST00000580419 WT1-ASQ06250 92 aa10.88□□□□□ -0.67
SMARCE1-216ENST00000580419 ZNF585BQ52M93 769 aa10.88□□□□□ -0.67
SMARCE1-216ENST00000580419 TMEM61Q8N0U2 210 aa10.88□□□□□ -0.67
SMARCE1-216ENST00000580419 UXS1Q8NBZ7 420 aa10.88□□□□□ -0.67
SMARCE1-216ENST00000580419 TMEM56Q96MV1 263 aa10.88□□□□□ -0.67
SMARCE1-216ENST00000580419 TMEM14BQ9NUH8 114 aa10.88□□□□□ -0.67
SMARCE1-216ENST00000580419 MLXQ9UH92 298 aa10.88□□□□□ -0.67
SMARCE1-216ENST00000580419 F11RQ9Y624 299 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-216ENST00000580419 SMIM31A0A1B0GVY4 71 aa10.87□□□□□ -0.67
SMARCE1-216ENST00000580419 RBMY1BA6NDE4 496 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-216ENST00000580419 RBMY1EA6NEQ0 496 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-216ENST00000580419 NDUFA4O00483 81 aa10.87□□□□□ -0.67
SMARCE1-216ENST00000580419 TGOLN2O43493 480 aa10.87□□□□□ -0.67
SMARCE1-216ENST00000580419 SNAPC5O75971 98 aa10.87□□□□□ -0.67
SMARCE1-216ENST00000580419 RBMY1DP0C7P1 496 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-216ENST00000580419 PLET1Q6UQ28 207 aa10.87□□□□□ -0.67
SMARCE1-216ENST00000580419 ZNF114Q8NC26 417 aa10.87□□□□□ -0.67
SMARCE1-216ENST00000580419 OR1P1Q8NH06 330 aa10.87□□□□□ -0.67
SMARCE1-216ENST00000580419 FCAMRQ8WWV6 532 aa10.87□□□□□ -0.67
SMARCE1-216ENST00000580419 TMEM190Q8WZ59 177 aa10.87□□□□□ -0.67
SMARCE1-216ENST00000580419 WDR89Q96FK6 387 aaPredicted RBP10.87□□□□□ -0.67
SMARCE1-216ENST00000580419 TXN2Q99757 166 aa10.87□□□□□ -0.67
SMARCE1-216ENST00000580419 SPAG8Q99932 426 aaPredicted RBP10.87□□□□□ -0.67
SMARCE1-216ENST00000580419 SRD5A3Q9H8P0 318 aa10.87□□□□□ -0.67
SMARCE1-216ENST00000580419 PLEKHA3Q9HB20 300 aa10.87□□□□□ -0.67
SMARCE1-216ENST00000580419 DAZ1Q9NQZ3 744 aaKnown RBP10.87□□□□□ -0.67
SMARCE1-216ENST00000580419 ZNF320A2RRD8 509 aa10.86□□□□□ -0.67
SMARCE1-216ENST00000580419 TSPAN4O14817 238 aa10.86□□□□□ -0.67
SMARCE1-216ENST00000580419 RLN1P04808 185 aa10.86□□□□□ -0.67
SMARCE1-216ENST00000580419 OR13C7P0DN81 318 aa10.86□□□□□ -0.67
SMARCE1-216ENST00000580419 RPA2P15927 270 aa10.86□□□□□ -0.67
SMARCE1-216ENST00000580419 RCVRNP35243 200 aa10.86□□□□□ -0.67
SMARCE1-216ENST00000580419 HRH1P35367 487 aa10.86□□□□□ -0.67
SMARCE1-216ENST00000580419 GUCA2BQ16661 112 aa10.86□□□□□ -0.67
SMARCE1-216ENST00000580419 C19orf35Q6ZS72 473 aa10.86□□□□□ -0.67
SMARCE1-216ENST00000580419 WFDC3Q8IUB2 231 aa10.86□□□□□ -0.67
SMARCE1-216ENST00000580419 SLC38A6Q8IZM9 456 aa10.86□□□□□ -0.67
SMARCE1-216ENST00000580419 ZNF486Q96H40 463 aaPredicted RBP10.86□□□□□ -0.67
SMARCE1-216ENST00000580419 TP53TG1Q9Y2A0 90 aa10.86□□□□□ -0.67
SMARCE1-216ENST00000580419 C15orf61A6NNL5 157 aa10.85□□□□□ -0.67
SMARCE1-216ENST00000580419 C15orf62A8K5M9 175 aa10.85□□□□□ -0.67
SMARCE1-216ENST00000580419 INS-IGF2F8WCM5 200 aa10.85□□□□□ -0.67
SMARCE1-216ENST00000580419 REG1AP05451 166 aa10.85□□□□□ -0.67
SMARCE1-216ENST00000580419 ATF4P18848 351 aaPredicted RBP10.85□□□□□ -0.67
SMARCE1-216ENST00000580419 TBPP20226 339 aa10.85□□□□□ -0.67
SMARCE1-216ENST00000580419 GPR183P32249 361 aa10.85□□□□□ -0.67
SMARCE1-216ENST00000580419 LPAR6P43657 344 aa10.85□□□□□ -0.67
SMARCE1-216ENST00000580419 RND3P61587 244 aa10.85□□□□□ -0.67
SMARCE1-216ENST00000580419 UNQ9165/PRO28630Q6UXU0 137 aa10.85□□□□□ -0.67
SMARCE1-216ENST00000580419 DEFB125Q8N687 156 aa10.85□□□□□ -0.67
SMARCE1-216ENST00000580419 OR10W1Q8NGF6 305 aa10.85□□□□□ -0.67
SMARCE1-216ENST00000580419 OR52B4Q8NGK2 314 aa10.85□□□□□ -0.67
SMARCE1-216ENST00000580419 C15orf40Q8WUR7 153 aa10.85□□□□□ -0.67
SMARCE1-216ENST00000580419 FXYD6Q9H0Q3 95 aa10.85□□□□□ -0.67
SMARCE1-216ENST00000580419 C21orf62Q9NYP8 219 aa10.85□□□□□ -0.67
SMARCE1-216ENST00000580419 OR51B2Q9Y5P1 312 aa10.85□□□□□ -0.67
SMARCE1-216ENST00000580419 MEIS3P1A6NDR6 274 aa10.84□□□□□ -0.67
SMARCE1-216ENST00000580419 UBE2CO00762 179 aa10.84□□□□□ -0.67
SMARCE1-216ENST00000580419 KRASP01116 189 aa10.84□□□□□ -0.67
SMARCE1-216ENST00000580419 PMP2P02689 132 aa10.84□□□□□ -0.67
SMARCE1-216ENST00000580419 CD5P06127 495 aa10.84□□□□□ -0.67
SMARCE1-216ENST00000580419 TM4SF20Q53R12 229 aa10.84□□□□□ -0.67
SMARCE1-216ENST00000580419 LAMTOR1Q6IAA8 161 aa10.84□□□□□ -0.67
SMARCE1-216ENST00000580419 RBPMS2Q6ZRY4 209 aaKnown RBP10.84□□□□□ -0.67
SMARCE1-216ENST00000580419 Q6ZWC4 215 aa10.84□□□□□ -0.67
SMARCE1-216ENST00000580419 OR2C3Q8N628 320 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms