RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 OR4C12Q96R67 309 aa15.01□□□□□ -0.01
SS18-209ENST00000578595 TP53RKQ96S44 253 aa15.01□□□□□ -0.01
SS18-209ENST00000578595 FAM212BQ9NTI7 297 aaPredicted RBP15.01□□□□□ -0.01
SS18-209ENST00000578595 SCP2D1Q9UJQ7 156 aa15.01□□□□□ -0.01
SS18-209ENST00000578595 PRNDQ9UKY0 176 aa15.01□□□□□ -0.01
SS18-209ENST00000578595 S4R3C0 116 aa15.01□□□□□ -0.01
SS18-209ENST00000578595 TEX50A0A1B0GTY4 177 aa15□□□□□ -0.01
SS18-209ENST00000578595 CGB1A6NKQ9 187 aa15□□□□□ -0.01
SS18-209ENST00000578595 IGHV3-23P01764 117 aa15□□□□□ -0.01
SS18-209ENST00000578595 OR13C7P0DN81 318 aa15□□□□□ -0.01
SS18-209ENST00000578595 FAUP35544 74 aaKnown RBP15□□□□□ -0.01
SS18-209ENST00000578595 EGFEM1PQ0D2K5 195 aa15□□□□□ -0.01
SS18-209ENST00000578595 SP6Q3SY56 376 aa15□□□□□ -0.01
SS18-209ENST00000578595 THOC7Q6I9Y2 204 aaKnown RBP15□□□□□ -0.01
SS18-209ENST00000578595 ZNF343Q6P1L6 599 aa15□□□□□ -0.01
SS18-209ENST00000578595 Q8N402 240 aa15□□□□□ -0.01
SS18-209ENST00000578595 TRBV9A0A0B4J1U6 114 aa14.99□□□□□ -0.01
SS18-209ENST00000578595 IGLC7A0M8Q6 106 aa14.99□□□□□ -0.01
SS18-209ENST00000578595 CYB5BO43169 146 aa14.99□□□□□ -0.01
SS18-209ENST00000578595 ATG12O94817 140 aa14.99□□□□□ -0.01
SS18-209ENST00000578595 HIST1H1BP16401 226 aaKnown RBP14.99□□□□□ -0.01
SS18-209ENST00000578595 CTRB1P17538 263 aa14.99□□□□□ -0.01
SS18-209ENST00000578595 AP3S2P59780 193 aa14.99□□□□□ -0.01
SS18-209ENST00000578595 DEFB121Q5J5C9 76 aa14.99□□□□□ -0.01
SS18-209ENST00000578595 CTRB2Q6GPI1 263 aa14.99□□□□□ -0.01
SS18-209ENST00000578595 TOMM5Q8N4H5 51 aa14.99□□□□□ -0.01
SS18-209ENST00000578595 LSM10Q969L4 123 aaKnown RBP14.99□□□□□ -0.01
SS18-209ENST00000578595 SEC22AQ96IW7 307 aa14.99□□□□□ -0.01
SS18-209ENST00000578595 ELOVL1Q9BW60 279 aa14.99□□□□□ -0.01
SS18-209ENST00000578595 FKBP11Q9NYL4 201 aa14.99□□□□□ -0.01
SS18-209ENST00000578595 V9GYH0 126 aa14.99□□□□□ -0.01
SS18-209ENST00000578595 WI2-2373I1.2A0A1W2PRP0 233 aa14.98□□□□□ -0.01
SS18-209ENST00000578595 C15orf61A6NNL5 157 aa14.98□□□□□ -0.01
SS18-209ENST00000578595 IGKV1-39P01597 117 aa14.98□□□□□ -0.01
SS18-209ENST00000578595 IGKV1D-39P04432 117 aa14.98□□□□□ -0.01
SS18-209ENST00000578595 INPP1P49441 399 aa14.98□□□□□ -0.01
SS18-209ENST00000578595 INSL3P51460 131 aa14.98□□□□□ -0.01
SS18-209ENST00000578595 SYNJ2BPP57105 145 aa14.98□□□□□ -0.01
SS18-209ENST00000578595 SURF2Q15527 256 aaPredicted RBP14.98□□□□□ -0.01
SS18-209ENST00000578595 EEF1AKMT3Q96AZ1 226 aa14.98□□□□□ -0.01
SS18-209ENST00000578595 TMEM56Q96MV1 263 aa14.98□□□□□ -0.01
SS18-209ENST00000578595 PRR25Q96S07 402 aa14.98□□□□□ -0.01
SS18-209ENST00000578595 SOSTQ9BQB4 213 aa14.98□□□□□ -0.01
SS18-209ENST00000578595 NDUFB8O95169 186 aa14.97□□□□□ -0.01
SS18-209ENST00000578595 CRYGCP07315 174 aa14.97□□□□□ -0.01
SS18-209ENST00000578595 FGF2P09038 288 aa14.97□□□□□ -0.01
SS18-209ENST00000578595 PTBP1P26599 531 aaKnown RBP eCLIP14.97□□□□□ -0.01
SS18-209ENST00000578595 TATDN3Q17R31 274 aa14.97□□□□□ -0.01
SS18-209ENST00000578595 ZNF57Q68EA5 555 aaPredicted RBP14.97□□□□□ -0.01
SS18-209ENST00000578595 HSD17B13Q7Z5P4 300 aaPredicted RBP14.97□□□□□ -0.01
SS18-209ENST00000578595 ZNF429Q86V71 674 aa14.97□□□□□ -0.01
SS18-209ENST00000578595 OR5B3Q8NH48 314 aa14.97□□□□□ -0.01
SS18-209ENST00000578595 SRSF8Q9BRL6 282 aaKnown RBP14.97□□□□□ -0.01
SS18-209ENST00000578595 NAA60Q9H7X0 242 aa14.97□□□□□ -0.01
SS18-209ENST00000578595 THYN1Q9P016 225 aa14.97□□□□□ -0.01
SS18-209ENST00000578595 NDUFA13Q9P0J0 144 aa14.97□□□□□ -0.01
SS18-209ENST00000578595 PPP5D1E7EU14 171 aa14.96□□□□□ -0.01
SS18-209ENST00000578595 K7EIL1 84 aa14.96□□□□□ -0.01
SS18-209ENST00000578595 OR5AC1P0C628 307 aa14.96□□□□□ -0.01
SS18-209ENST00000578595 ZNF79Q15937 498 aa14.96□□□□□ -0.01
SS18-209ENST00000578595 IZUMO4Q1ZYL8 232 aa14.96□□□□□ -0.01
SS18-209ENST00000578595 SLC25A24Q6NUK1 477 aa14.96□□□□□ -0.01
SS18-209ENST00000578595 ACSM6Q6P461 480 aa14.96□□□□□ -0.01
SS18-209ENST00000578595 CCDC190Q86UF4 302 aa14.96□□□□□ -0.01
SS18-209ENST00000578595 GDPD1Q8N9F7 314 aa14.96□□□□□ -0.01
SS18-209ENST00000578595 RRNAD1Q96FB5 475 aaKnown RBP14.96□□□□□ -0.01
SS18-209ENST00000578595 SCGB3A2Q96PL1 93 aa14.96□□□□□ -0.01
SS18-209ENST00000578595 FANCD2OSQ96PS1 177 aa14.96□□□□□ -0.01
SS18-209ENST00000578595 PDCD10Q9BUL8 212 aa14.96□□□□□ -0.01
SS18-209ENST00000578595 C5orf66Q9H5L9 145 aa14.96□□□□□ -0.01
SS18-209ENST00000578595 PRKDCP78527 4128 aaKnown RBP14.95□□□□□ -0.02
SS18-209ENST00000578595 IGLV11-55A0A075B6I3 123 aa14.95□□□□□ -0.02
SS18-209ENST00000578595 BMPR1BO00238 502 aa14.95□□□□□ -0.02
SS18-209ENST00000578595 ARL3P36405 182 aa14.95□□□□□ -0.02
SS18-209ENST00000578595 WT1-ASQ06250 92 aa14.95□□□□□ -0.02
SS18-209ENST00000578595 FAM209BQ5JX69 171 aa14.95□□□□□ -0.02
SS18-209ENST00000578595 CLEC19AQ6UXS0 136 aa14.95□□□□□ -0.02
SS18-209ENST00000578595 HAPLN4Q86UW8 402 aa14.95□□□□□ -0.02
SS18-209ENST00000578595 SGPP2Q8IWX5 399 aa14.95□□□□□ -0.02
SS18-209ENST00000578595 OR6Q1Q8NGQ2 317 aa14.95□□□□□ -0.02
SS18-209ENST00000578595 TRIM63Q969Q1 353 aa14.95□□□□□ -0.02
SS18-209ENST00000578595 RTBDNQ9BSG5 229 aaPredicted RBP14.95□□□□□ -0.02
SS18-209ENST00000578595 NDUFA4L2Q9NRX3 87 aa14.95□□□□□ -0.02
SS18-209ENST00000578595 TMEM14BQ9NUH8 114 aa14.95□□□□□ -0.02
SS18-209ENST00000578595 SLC2A8Q9NY64 477 aa14.95□□□□□ -0.02
SS18-209ENST00000578595 ZNF256Q9Y2P7 627 aaPredicted RBP14.95□□□□□ -0.02
SS18-209ENST00000578595 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.94□□□□□ -0.02
SS18-209ENST00000578595 MFSD2BA6NFX1 497 aa14.94□□□□□ -0.02
SS18-209ENST00000578595 DBX1A6NMT0 343 aa14.94□□□□□ -0.02
SS18-209ENST00000578595 B3GALNT1O75752 331 aa14.94□□□□□ -0.02
SS18-209ENST00000578595 AKR1C4P17516 323 aa14.94□□□□□ -0.02
SS18-209ENST00000578595 UCP1P25874 307 aa14.94□□□□□ -0.02
SS18-209ENST00000578595 SPINK9Q5DT21 86 aa14.94□□□□□ -0.02
SS18-209ENST00000578595 TRIQKQ629K1 86 aa14.94□□□□□ -0.02
SS18-209ENST00000578595 SLC35G3Q8N808 338 aa14.94□□□□□ -0.02
SS18-209ENST00000578595 OR9G4Q8NGQ1 327 aa14.94□□□□□ -0.02
SS18-209ENST00000578595 CXorf58Q96LI9 332 aa14.94□□□□□ -0.02
SS18-209ENST00000578595 PLEKHA3Q9HB20 300 aa14.94□□□□□ -0.02
SS18-209ENST00000578595 ZC4H2Q9NQZ6 224 aa14.94□□□□□ -0.02
SS18-209ENST00000578595 GPR132Q9UNW8 380 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms