RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 TDRG1Q3Y452 100 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 ALKBH2Q6NS38 261 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 FAM122AQ96E09 287 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 HINT2Q9BX68 163 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 PLSCR4Q9NRQ2 329 aa15.66■□□□□ 0.1
SCARF1-206ENST00000573852 DSCAMO60469 2012 aa15.65■□□□□ 0.1
SCARF1-206ENST00000573852 TRAV9-1A0A075B6T8 112 aa15.65■□□□□ 0.1
SCARF1-206ENST00000573852 IER3P46695 156 aa15.65■□□□□ 0.1
SCARF1-206ENST00000573852 FAM201AQ5SY85 155 aa15.65■□□□□ 0.1
SCARF1-206ENST00000573852 MOGAT3Q86VF5 341 aa15.65■□□□□ 0.1
SCARF1-206ENST00000573852 TMEM68Q96MH6 324 aa15.65■□□□□ 0.1
SCARF1-206ENST00000573852 UHRF2Q96PU4 802 aa15.65■□□□□ 0.1
SCARF1-206ENST00000573852 OR2V2Q96R30 315 aa15.65■□□□□ 0.1
SCARF1-206ENST00000573852 IDI2-AS1Q9NZ38 188 aa15.65■□□□□ 0.1
SCARF1-206ENST00000573852 COLQQ9Y215 455 aaPredicted RBP15.65■□□□□ 0.1
SCARF1-206ENST00000573852 ASPMQ8IZT6 3477 aa15.65■□□□□ 0.1
SCARF1-206ENST00000573852 M0R143 59 aa15.65■□□□□ 0.1
SCARF1-206ENST00000573852 MT-CO2P00403 227 aa15.65■□□□□ 0.1
SCARF1-206ENST00000573852 TPPP2P59282 170 aa15.65■□□□□ 0.1
SCARF1-206ENST00000573852 SRSF6Q13247 344 aaKnown RBP15.65■□□□□ 0.1
SCARF1-206ENST00000573852 RAB31Q13636 194 aa15.65■□□□□ 0.1
SCARF1-206ENST00000573852 MMD2Q8IY49 270 aa15.65■□□□□ 0.1
SCARF1-206ENST00000573852 FDCSPQ8NFU4 85 aa15.65■□□□□ 0.1
SCARF1-206ENST00000573852 ZNF71Q9NQZ8 489 aaPredicted RBP15.65■□□□□ 0.1
SCARF1-206ENST00000573852 V9GYV3 84 aa15.65■□□□□ 0.1
SCARF1-206ENST00000573852 FCN1O00602 326 aa15.64■□□□□ 0.09
SCARF1-206ENST00000573852 PAFAH1B2P68402 229 aa15.64■□□□□ 0.09
SCARF1-206ENST00000573852 LY96Q9Y6Y9 160 aa15.64■□□□□ 0.09
SCARF1-206ENST00000573852 A8MXE2 369 aa15.64■□□□□ 0.09
SCARF1-206ENST00000573852 PRR33A8MZF0 331 aa15.64■□□□□ 0.09
SCARF1-206ENST00000573852 NKX2-8O15522 239 aa15.64■□□□□ 0.09
SCARF1-206ENST00000573852 ESDP10768 282 aa15.64■□□□□ 0.09
SCARF1-206ENST00000573852 RAB4AP20338 218 aa15.64■□□□□ 0.09
SCARF1-206ENST00000573852 CFHR2P36980 270 aa15.64■□□□□ 0.09
SCARF1-206ENST00000573852 PLA2G2CQ5R387 149 aa15.64■□□□□ 0.09
SCARF1-206ENST00000573852 TOMM20LQ6UXN7 152 aa15.64■□□□□ 0.09
SCARF1-206ENST00000573852 MOB3BQ86TA1 216 aa15.64■□□□□ 0.09
SCARF1-206ENST00000573852 NEUROG1Q92886 237 aa15.64■□□□□ 0.09
SCARF1-206ENST00000573852 RBM14Q96PK6 669 aaKnown RBP15.64■□□□□ 0.09
SCARF1-206ENST00000573852 ENY2Q9NPA8 101 aa15.64■□□□□ 0.09
SCARF1-206ENST00000573852 DCAF16Q9NXF7 216 aa15.64■□□□□ 0.09
SCARF1-206ENST00000573852 TNCP24821 2201 aa15.63■□□□□ 0.09
SCARF1-206ENST00000573852 SP9P0CG40 484 aa15.63■□□□□ 0.09
SCARF1-206ENST00000573852 AREGP15514 252 aa15.63■□□□□ 0.09
SCARF1-206ENST00000573852 RAB7AP51149 207 aa15.63■□□□□ 0.09
SCARF1-206ENST00000573852 RPEL1Q2QD12 228 aa15.63■□□□□ 0.09
SCARF1-206ENST00000573852 TPTE2P1Q5T6R2 138 aa15.63■□□□□ 0.09
SCARF1-206ENST00000573852 DUX4L9Q6RFH8 374 aaPredicted RBP15.63■□□□□ 0.09
SCARF1-206ENST00000573852 HSPB9Q9BQS6 159 aa15.63■□□□□ 0.09
SCARF1-206ENST00000573852 DSCAML1Q8TD84 2053 aa15.63■□□□□ 0.09
SCARF1-206ENST00000573852 ZFHX4Q86UP3 3567 aa15.63■□□□□ 0.09
SCARF1-206ENST00000573852 PCNX2A6NKB5 2137 aa15.63■□□□□ 0.09
SCARF1-206ENST00000573852 TNFSF13O75888 250 aa15.63■□□□□ 0.09
SCARF1-206ENST00000573852 CDKN1AP38936 164 aa15.63■□□□□ 0.09
SCARF1-206ENST00000573852 PSG5Q15238 335 aa15.63■□□□□ 0.09
SCARF1-206ENST00000573852 BHLHA15Q7RTS1 189 aaPredicted RBP15.63■□□□□ 0.09
SCARF1-206ENST00000573852 OR8I2Q8N0Y5 310 aa15.63■□□□□ 0.09
SCARF1-206ENST00000573852 STARD4Q96DR4 205 aa15.63■□□□□ 0.09
SCARF1-206ENST00000573852 SNURFLB1AK76 121 aa15.62■□□□□ 0.09
SCARF1-206ENST00000573852 CRYBB3P26998 211 aa15.62■□□□□ 0.09
SCARF1-206ENST00000573852 SLC45A2Q9UMX9 530 aa15.62■□□□□ 0.09
SCARF1-206ENST00000573852 OR51B2Q9Y5P1 312 aa15.62■□□□□ 0.09
SCARF1-206ENST00000573852 LHBP01229 141 aa15.62■□□□□ 0.09
SCARF1-206ENST00000573852 TDGF1P3P51864 188 aa15.62■□□□□ 0.09
SCARF1-206ENST00000573852 CENPWQ5EE01 88 aa15.62■□□□□ 0.09
SCARF1-206ENST00000573852 BAGE3Q86Y29 109 aa15.62■□□□□ 0.09
SCARF1-206ENST00000573852 BAGE2Q86Y30 109 aa15.62■□□□□ 0.09
SCARF1-206ENST00000573852 LYG1Q8N1E2 194 aa15.62■□□□□ 0.09
SCARF1-206ENST00000573852 ST6GALNAC3Q8NDV1 305 aa15.62■□□□□ 0.09
SCARF1-206ENST00000573852 LRFN3Q9BTN0 628 aa15.62■□□□□ 0.09
SCARF1-206ENST00000573852 SLC25A15Q9Y619 301 aa15.62■□□□□ 0.09
SCARF1-206ENST00000573852 SVILO95425 2214 aa15.61■□□□□ 0.09
SCARF1-206ENST00000573852 HELTA6NFD8 242 aa15.61■□□□□ 0.09
SCARF1-206ENST00000573852 ITGB1BP1O14713 200 aa15.61■□□□□ 0.09
SCARF1-206ENST00000573852 MRPS11P82912 194 aaKnown RBP15.61■□□□□ 0.09
SCARF1-206ENST00000573852 TEX43Q6ZNM6 134 aa15.61■□□□□ 0.09
SCARF1-206ENST00000573852 ZNF503Q96F45 646 aa15.61■□□□□ 0.09
SCARF1-206ENST00000573852 NABP2Q9BQ15 211 aa15.61■□□□□ 0.09
SCARF1-206ENST00000573852 CFAP47Q6ZTR5 3102 aa15.61■□□□□ 0.09
SCARF1-206ENST00000573852 IGKV1OR2-108A0A075B7D4 117 aa15.61■□□□□ 0.09
SCARF1-206ENST00000573852 KBTBD11-OT1A0A1B0GTJ5 212 aa15.61■□□□□ 0.09
SCARF1-206ENST00000573852 SPRY3O43610 288 aa15.61■□□□□ 0.09
SCARF1-206ENST00000573852 GATA2P23769 480 aaPredicted RBP15.61■□□□□ 0.09
SCARF1-206ENST00000573852 GNG4P50150 75 aa15.61■□□□□ 0.09
SCARF1-206ENST00000573852 ZNF83P51522 516 aa15.61■□□□□ 0.09
SCARF1-206ENST00000573852 ZNF705AQ6ZN79 300 aaPredicted RBP15.61■□□□□ 0.09
SCARF1-206ENST00000573852 PQLC2Q6ZP29 291 aa15.61■□□□□ 0.09
SCARF1-206ENST00000573852 DOLPP1Q86YN1 238 aa15.61■□□□□ 0.09
SCARF1-206ENST00000573852 DKK4Q9UBT3 224 aa15.61■□□□□ 0.09
SCARF1-206ENST00000573852 SPINK4O60575 86 aa15.61■□□□□ 0.09
SCARF1-206ENST00000573852 RANP62826 216 aaKnown RBP15.61■□□□□ 0.09
SCARF1-206ENST00000573852 ITLN1Q8WWA0 313 aa15.61■□□□□ 0.09
SCARF1-206ENST00000573852 RNASE7Q9H1E1 156 aaKnown RBP15.61■□□□□ 0.09
SCARF1-206ENST00000573852 PARD6AQ9NPB6 346 aa15.61■□□□□ 0.09
SCARF1-206ENST00000573852 SLC25A10Q9UBX3 287 aaPredicted RBP15.61■□□□□ 0.09
SCARF1-206ENST00000573852 PROCRQ9UNN8 238 aa15.61■□□□□ 0.09
SCARF1-206ENST00000573852 ICE1Q9Y2F5 2266 aa15.6■□□□□ 0.09
SCARF1-206ENST00000573852 Q0VG73 95 aa15.6■□□□□ 0.09
SCARF1-206ENST00000573852 C1orf174Q8IYL3 243 aa15.6■□□□□ 0.09
SCARF1-206ENST00000573852 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms