RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 ZNF414Q96IQ9 312 aa13.13□□□□□ -0.31
SMG6-214ENST00000573827 FAM212BQ9NTI7 297 aaPredicted RBP13.13□□□□□ -0.31
SMG6-214ENST00000573827 TRBV7-1A0A0A6YYK4 115 aa13.12□□□□□ -0.31
SMG6-214ENST00000573827 F8W735 103 aaPredicted RBP13.12□□□□□ -0.31
SMG6-214ENST00000573827 C3orf84H3BNL1 204 aa13.12□□□□□ -0.31
SMG6-214ENST00000573827 KRASP01116 189 aa13.12□□□□□ -0.31
SMG6-214ENST00000573827 CLEC3BP05452 202 aa13.12□□□□□ -0.31
SMG6-214ENST00000573827 PTBP1P26599 531 aaKnown RBP eCLIP13.12□□□□□ -0.31
SMG6-214ENST00000573827 G6PCP35575 357 aa13.12□□□□□ -0.31
SMG6-214ENST00000573827 HAGHQ16775 308 aa13.12□□□□□ -0.31
SMG6-214ENST00000573827 PHLDA2Q53GA4 152 aa13.12□□□□□ -0.31
SMG6-214ENST00000573827 THOC7Q6I9Y2 204 aaKnown RBP13.12□□□□□ -0.31
SMG6-214ENST00000573827 UNQ9165/PRO28630Q6UXU0 137 aa13.12□□□□□ -0.31
SMG6-214ENST00000573827 LHFPL1Q86WI0 220 aa13.12□□□□□ -0.31
SMG6-214ENST00000573827 LAX1Q8IWV1 398 aa13.12□□□□□ -0.31
SMG6-214ENST00000573827 OR1L8Q8NGR8 309 aa13.12□□□□□ -0.31
SMG6-214ENST00000573827 CXorf58Q96LI9 332 aa13.12□□□□□ -0.31
SMG6-214ENST00000573827 EDA2RQ9HAV5 297 aa13.12□□□□□ -0.31
SMG6-214ENST00000573827 NSG2Q9Y328 171 aa13.12□□□□□ -0.31
SMG6-214ENST00000573827 SMIM31A0A1B0GVY4 71 aa13.11□□□□□ -0.31
SMG6-214ENST00000573827 SERPINE2P07093 398 aa13.11□□□□□ -0.31
SMG6-214ENST00000573827 TRAPPC2P0DI81 140 aa13.11□□□□□ -0.31
SMG6-214ENST00000573827 TRAPPC2BP0DI82 140 aa13.11□□□□□ -0.31
SMG6-214ENST00000573827 C8orf88P0DMB2 117 aa13.11□□□□□ -0.31
SMG6-214ENST00000573827 OR13C7P0DN81 318 aa13.11□□□□□ -0.31
SMG6-214ENST00000573827 DEFA4P12838 97 aa13.11□□□□□ -0.31
SMG6-214ENST00000573827 ZNF182P17025 639 aaPredicted RBP13.11□□□□□ -0.31
SMG6-214ENST00000573827 CBLN1P23435 193 aa13.11□□□□□ -0.31
SMG6-214ENST00000573827 SEC22AQ96IW7 307 aa13.11□□□□□ -0.31
SMG6-214ENST00000573827 CITED4Q96RK1 184 aa13.11□□□□□ -0.31
SMG6-214ENST00000573827 ABHD1Q96SE0 405 aa13.11□□□□□ -0.31
SMG6-214ENST00000573827 MIXL1Q9H2W2 232 aa13.11□□□□□ -0.31
SMG6-214ENST00000573827 TMEM14BQ9NUH8 114 aa13.11□□□□□ -0.31
SMG6-214ENST00000573827 TECRQ9NZ01 308 aaKnown RBP13.11□□□□□ -0.31
SMG6-214ENST00000573827 KLK11Q9UBX7 282 aa13.11□□□□□ -0.31
SMG6-214ENST00000573827 MLXQ9UH92 298 aa13.11□□□□□ -0.31
SMG6-214ENST00000573827 HYDINQ4G0P3 5121 aa13.1□□□□□ -0.31
SMG6-214ENST00000573827 M0QYG6 137 aa13.1□□□□□ -0.31
SMG6-214ENST00000573827 TPPPO94811 219 aa13.1□□□□□ -0.31
SMG6-214ENST00000573827 CD7P09564 240 aa13.1□□□□□ -0.31
SMG6-214ENST00000573827 ERVK-16P61578 105 aa13.1□□□□□ -0.31
SMG6-214ENST00000573827 GPR107Q5VW38 600 aa13.1□□□□□ -0.31
SMG6-214ENST00000573827 HSD17B13Q7Z5P4 300 aaPredicted RBP13.1□□□□□ -0.31
SMG6-214ENST00000573827 TBC1D26Q86UD7 250 aa13.1□□□□□ -0.31
SMG6-214ENST00000573827 OR52I2Q8NH67 350 aa13.1□□□□□ -0.31
SMG6-214ENST00000573827 MUC7Q8TAX7 377 aa13.1□□□□□ -0.31
SMG6-214ENST00000573827 VN1R17PQ8TDU5 208 aa13.1□□□□□ -0.31
SMG6-214ENST00000573827 WDR89Q96FK6 387 aaPredicted RBP13.1□□□□□ -0.31
SMG6-214ENST00000573827 ZNF436Q9C0F3 470 aaPredicted RBP13.1□□□□□ -0.31
SMG6-214ENST00000573827 OR51B2Q9Y5P1 312 aa13.1□□□□□ -0.31
SMG6-214ENST00000573827 F11RQ9Y624 299 aaKnown RBP13.1□□□□□ -0.31
SMG6-214ENST00000573827 C15orf61A6NNL5 157 aa13.09□□□□□ -0.31
SMG6-214ENST00000573827 K7EIM0 57 aa13.09□□□□□ -0.31
SMG6-214ENST00000573827 GPR183P32249 361 aa13.09□□□□□ -0.31
SMG6-214ENST00000573827 TSPAN5P62079 268 aa13.09□□□□□ -0.31
SMG6-214ENST00000573827 TM4SF20Q53R12 229 aa13.09□□□□□ -0.31
SMG6-214ENST00000573827 LPCAT3Q6P1A2 487 aa13.09□□□□□ -0.31
SMG6-214ENST00000573827 GTSCR1Q86UQ5 136 aa13.09□□□□□ -0.31
SMG6-214ENST00000573827 SLC38A6Q8IZM9 456 aa13.09□□□□□ -0.31
SMG6-214ENST00000573827 TMEM61Q8N0U2 210 aa13.09□□□□□ -0.31
SMG6-214ENST00000573827 LSM10Q969L4 123 aaKnown RBP13.09□□□□□ -0.31
SMG6-214ENST00000573827 NEURL2Q9BR09 285 aa13.09□□□□□ -0.31
SMG6-214ENST00000573827 WFDC10AQ9H1F0 79 aa13.09□□□□□ -0.31
SMG6-214ENST00000573827 ZMAT4Q9H898 229 aa13.09□□□□□ -0.31
SMG6-214ENST00000573827 MTFP1Q9UDX5 166 aa13.09□□□□□ -0.31
SMG6-214ENST00000573827 SELENOKQ9Y6D0 94 aa13.09□□□□□ -0.31
SMG6-214ENST00000573827 P0C879 139 aa13.08□□□□□ -0.32
SMG6-214ENST00000573827 CD81P60033 236 aa13.08□□□□□ -0.32
SMG6-214ENST00000573827 RND3P61587 244 aa13.08□□□□□ -0.32
SMG6-214ENST00000573827 SPCS2Q15005 226 aa13.08□□□□□ -0.32
SMG6-214ENST00000573827 FAM106AQ4KMX7 169 aa13.08□□□□□ -0.32
SMG6-214ENST00000573827 CASC10Q5T4H9 136 aa13.08□□□□□ -0.32
SMG6-214ENST00000573827 MZT2AQ6P582 158 aa13.08□□□□□ -0.32
SMG6-214ENST00000573827 UXS1Q8NBZ7 420 aa13.08□□□□□ -0.32
SMG6-214ENST00000573827 OR5B3Q8NH48 314 aa13.08□□□□□ -0.32
SMG6-214ENST00000573827 DYNLRB2Q8TF09 96 aa13.08□□□□□ -0.32
SMG6-214ENST00000573827 AP3S1Q92572 193 aa13.08□□□□□ -0.32
SMG6-214ENST00000573827 MRGPRFQ96AM1 343 aa13.08□□□□□ -0.32
SMG6-214ENST00000573827 MRPS26Q9BYN8 205 aaKnown RBP13.08□□□□□ -0.32
SMG6-214ENST00000573827 PLEKHA3Q9HB20 300 aa13.08□□□□□ -0.32
SMG6-214ENST00000573827 EXTL2Q9UBQ6 330 aa13.08□□□□□ -0.32
SMG6-214ENST00000573827 PRNDQ9UKY0 176 aa13.08□□□□□ -0.32
SMG6-214ENST00000573827 ALMS1Q8TCU4 4167 aa13.08□□□□□ -0.32
SMG6-214ENST00000573827 RBMY1BA6NDE4 496 aaKnown RBP13.07□□□□□ -0.32
SMG6-214ENST00000573827 RBMY1EA6NEQ0 496 aaKnown RBP13.07□□□□□ -0.32
SMG6-214ENST00000573827 TGOLN2O43493 480 aa13.07□□□□□ -0.32
SMG6-214ENST00000573827 CD74P04233 296 aa13.07□□□□□ -0.32
SMG6-214ENST00000573827 CD3DP04234 171 aa13.07□□□□□ -0.32
SMG6-214ENST00000573827 RBMY1DP0C7P1 496 aaKnown RBP13.07□□□□□ -0.32
SMG6-214ENST00000573827 ADMP35318 185 aa13.07□□□□□ -0.32
SMG6-214ENST00000573827 RNASE12Q5GAN4 147 aaKnown RBP13.07□□□□□ -0.32
SMG6-214ENST00000573827 DEFB125Q8N687 156 aa13.07□□□□□ -0.32
SMG6-214ENST00000573827 OR4D10Q8NGI6 311 aa13.07□□□□□ -0.32
SMG6-214ENST00000573827 SCARB1Q8WTV0 552 aa13.07□□□□□ -0.32
SMG6-214ENST00000573827 TMEM190Q8WZ59 177 aa13.07□□□□□ -0.32
SMG6-214ENST00000573827 ATP6V0BQ99437 205 aa13.07□□□□□ -0.32
SMG6-214ENST00000573827 CHRDL1Q9BU40 450 aa13.07□□□□□ -0.32
SMG6-214ENST00000573827 IGHV3-35A0A0C4DH35 117 aa13.06□□□□□ -0.32
SMG6-214ENST00000573827 ZNF320A2RRD8 509 aa13.06□□□□□ -0.32
SMG6-214ENST00000573827 FAM25AB3EWG3 89 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms