RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 GCM1Q9NP62 436 aa8.88□□□□□ -0.99
CCDC40-207ENST00000572253 PRNDQ9UKY0 176 aa8.88□□□□□ -0.99
CCDC40-207ENST00000572253 FOXA2Q9Y261 457 aaPredicted RBP8.88□□□□□ -0.99
CCDC40-207ENST00000572253 MYO15AQ9UKN7 3530 aa8.88□□□□□ -0.99
CCDC40-207ENST00000572253 FNDC10F2Z333 226 aa8.88□□□□□ -0.99
CCDC40-207ENST00000572253 K7EN84 100 aa8.88□□□□□ -0.99
CCDC40-207ENST00000572253 CGAP01215 116 aa8.88□□□□□ -0.99
CCDC40-207ENST00000572253 CENPWQ5EE01 88 aa8.88□□□□□ -0.99
CCDC40-207ENST00000572253 IGKV1D-17A0A075B6S4 117 aa8.88□□□□□ -0.99
CCDC40-207ENST00000572253 OR7C2O60412 319 aa8.88□□□□□ -0.99
CCDC40-207ENST00000572253 IGFBP2P18065 325 aa8.88□□□□□ -0.99
CCDC40-207ENST00000572253 KRTDAPP60985 99 aa8.88□□□□□ -0.99
CCDC40-207ENST00000572253 OR4A47Q6IF82 309 aa8.88□□□□□ -0.99
CCDC40-207ENST00000572253 PQLC2Q6ZP29 291 aa8.88□□□□□ -0.99
CCDC40-207ENST00000572253 LRP11Q86VZ4 500 aa8.88□□□□□ -0.99
CCDC40-207ENST00000572253 OR4B1Q8NGF8 309 aa8.88□□□□□ -0.99
CCDC40-207ENST00000572253 LRFN3Q9BTN0 628 aa8.88□□□□□ -0.99
CCDC40-207ENST00000572253 IGHV2OR16-5A0A0B4J2B6 119 aa8.87□□□□□ -0.99
CCDC40-207ENST00000572253 ITGB1BP1O14713 200 aa8.87□□□□□ -0.99
CCDC40-207ENST00000572253 MRPS11P82912 194 aaKnown RBP8.87□□□□□ -0.99
CCDC40-207ENST00000572253 KRTCAP3Q53RY4 240 aa8.87□□□□□ -0.99
CCDC40-207ENST00000572253 MIR17HGQ75NE6 70 aa8.87□□□□□ -0.99
CCDC40-207ENST00000572253 SLC35E1Q96K37 410 aa8.87□□□□□ -0.99
CCDC40-207ENST00000572253 HCFC1P51610 2035 aa8.87□□□□□ -0.99
CCDC40-207ENST00000572253 IGHV3OR15-7A0A075B7D8 119 aa8.87□□□□□ -0.99
CCDC40-207ENST00000572253 A0A1W2PNU3 283 aaPredicted RBP8.87□□□□□ -0.99
CCDC40-207ENST00000572253 OR5G3P0C626 314 aa8.87□□□□□ -0.99
CCDC40-207ENST00000572253 CRYBB3P26998 211 aa8.87□□□□□ -0.99
CCDC40-207ENST00000572253 TPTE2P1Q5T6R2 138 aa8.87□□□□□ -0.99
CCDC40-207ENST00000572253 NABP2Q9BQ15 211 aa8.87□□□□□ -0.99
CCDC40-207ENST00000572253 FAM103A1Q9BTL3 118 aaKnown RBP8.87□□□□□ -0.99
CCDC40-207ENST00000572253 OR51B2Q9Y5P1 312 aa8.87□□□□□ -0.99
CCDC40-207ENST00000572253 FOXH1O75593 365 aa8.87□□□□□ -0.99
CCDC40-207ENST00000572253 OR5I1Q13606 314 aa8.87□□□□□ -0.99
CCDC40-207ENST00000572253 SARAFQ96BY9 339 aa8.87□□□□□ -0.99
CCDC40-207ENST00000572253 TMEM68Q96MH6 324 aa8.87□□□□□ -0.99
CCDC40-207ENST00000572253 OSTCQ9NRP0 149 aa8.87□□□□□ -0.99
CCDC40-207ENST00000572253 SERTAD4Q9NUC0 356 aa8.87□□□□□ -0.99
CCDC40-207ENST00000572253 CACNA1GO43497 2377 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 CD33P20138 364 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 CASP6P55212 293 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 ATP1A1-AS1Q5TC04 95 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 VWA1Q6PCB0 445 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 LYG1Q8N1E2 194 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 C19orf24Q9BVV8 132 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 TMEM14BQ9NUH8 114 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 V9GYV3 84 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 OR10J4P0C629 311 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 MGST1P10620 155 aaKnown RBP8.86□□□□□ -0.99
CCDC40-207ENST00000572253 AMTP48728 403 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 TNFSF10P50591 281 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 LOXL3P58215 753 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 PRR20EP86478 221 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 PRR20CP86479 221 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 PRR20DP86480 221 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 PRR20BP86481 221 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 PRR20AP86496 221 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 TP53TG3Q9ULZ0 132 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 PROCRQ9UNN8 238 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 DIRC3C9JPN6 131 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 J3QR06 171 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 IGHG3P01860 377 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 KIR2DL2P43627 348 aaPredicted RBP8.86□□□□□ -0.99
CCDC40-207ENST00000572253 ZNF134P52741 427 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 ATP5IP56385 69 aaPredicted RBP8.86□□□□□ -0.99
CCDC40-207ENST00000572253 CR1LQ2VPA4 569 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 MOGAT3Q86VF5 341 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 ZNRF1Q8ND25 227 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 DDB2Q92466 427 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 RNF2Q99496 336 aa8.86□□□□□ -0.99
CCDC40-207ENST00000572253 SPINK4O60575 86 aa8.85□□□□□ -0.99
CCDC40-207ENST00000572253 HLA-DQA1P01909 254 aa8.85□□□□□ -0.99
CCDC40-207ENST00000572253 SUMO1P63165 101 aaKnown RBP8.85□□□□□ -0.99
CCDC40-207ENST00000572253 OR10J3Q5JRS4 329 aa8.85□□□□□ -0.99
CCDC40-207ENST00000572253 DHRS13Q6UX07 377 aa8.85□□□□□ -0.99
CCDC40-207ENST00000572253 NEUROG1Q92886 237 aa8.85□□□□□ -0.99
CCDC40-207ENST00000572253 GNB4Q9HAV0 340 aa8.85□□□□□ -0.99
CCDC40-207ENST00000572253 SAA2-SAA4A0A096LPE2 208 aa8.85□□□□□ -0.99
CCDC40-207ENST00000572253 C19orf67A6NJJ6 358 aa8.85□□□□□ -0.99
CCDC40-207ENST00000572253 PRR33A8MZF0 331 aa8.85□□□□□ -0.99
CCDC40-207ENST00000572253 ZNF253O75346 499 aa8.85□□□□□ -0.99
CCDC40-207ENST00000572253 AMY1AP04745 511 aa8.85□□□□□ -0.99
CCDC40-207ENST00000572253 SAA2P0DJI9 122 aaPredicted RBP8.85□□□□□ -0.99
CCDC40-207ENST00000572253 CX3CL1P78423 397 aa8.85□□□□□ -0.99
CCDC40-207ENST00000572253 DOLPP1Q86YN1 238 aa8.85□□□□□ -0.99
CCDC40-207ENST00000572253 LEAP2Q969E1 77 aa8.85□□□□□ -0.99
CCDC40-207ENST00000572253 IDI2-AS1Q9NZ38 188 aa8.85□□□□□ -0.99
CCDC40-207ENST00000572253 GOLT1BQ9Y3E0 138 aa8.85□□□□□ -0.99
CCDC40-207ENST00000572253 IGHV1-18A0A0C4DH31 117 aa8.85□□□□□ -0.99
CCDC40-207ENST00000572253 LNP1A1A4G5 178 aa8.85□□□□□ -0.99
CCDC40-207ENST00000572253 IGLV1-44P01699 117 aa8.85□□□□□ -0.99
CCDC40-207ENST00000572253 CFHR2P36980 270 aa8.85□□□□□ -0.99
CCDC40-207ENST00000572253 CDKN1AP38936 164 aa8.85□□□□□ -0.99
CCDC40-207ENST00000572253 BHLHA15Q7RTS1 189 aaPredicted RBP8.85□□□□□ -0.99
CCDC40-207ENST00000572253 C9orf106Q8NAJ2 232 aa8.85□□□□□ -0.99
CCDC40-207ENST00000572253 ST6GALNAC3Q8NDV1 305 aa8.85□□□□□ -0.99
CCDC40-207ENST00000572253 ZNF331Q9NQX6 463 aaPredicted RBP8.85□□□□□ -0.99
CCDC40-207ENST00000572253 ISLRO14498 428 aa8.84□□□□□ -0.99
CCDC40-207ENST00000572253 GPX1P07203 203 aa8.84□□□□□ -0.99
CCDC40-207ENST00000572253 IRF2P14316 349 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms