RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 CSN3P07498 182 aa7.81□□□□□ -1.16
GTF3C1-213ENST00000571886 EDN2P20800 178 aa7.81□□□□□ -1.16
GTF3C1-213ENST00000571886 ZP3P21754 424 aa7.81□□□□□ -1.16
GTF3C1-213ENST00000571886 PTBP1P26599 531 aaKnown RBP eCLIP7.81□□□□□ -1.16
GTF3C1-213ENST00000571886 INSL3P51460 131 aa7.81□□□□□ -1.16
GTF3C1-213ENST00000571886 MFAP2P55001 183 aa7.81□□□□□ -1.16
GTF3C1-213ENST00000571886 ERVK-16P61578 105 aa7.81□□□□□ -1.16
GTF3C1-213ENST00000571886 MRPS10P82664 201 aaKnown RBP7.81□□□□□ -1.16
GTF3C1-213ENST00000571886 WT1-ASQ06250 92 aa7.81□□□□□ -1.16
GTF3C1-213ENST00000571886 ADAMTSL5Q6ZMM2 481 aa7.81□□□□□ -1.16
GTF3C1-213ENST00000571886 NECAP1Q8NC96 275 aa7.81□□□□□ -1.16
GTF3C1-213ENST00000571886 OR4C16Q8NGL9 310 aa7.81□□□□□ -1.16
GTF3C1-213ENST00000571886 CCDC140Q96MF4 163 aa7.81□□□□□ -1.16
GTF3C1-213ENST00000571886 RTBDNQ9BSG5 229 aaPredicted RBP7.81□□□□□ -1.16
GTF3C1-213ENST00000571886 COMMD5Q9GZQ3 224 aa7.81□□□□□ -1.16
GTF3C1-213ENST00000571886 NDUFA4L2Q9NRX3 87 aa7.81□□□□□ -1.16
GTF3C1-213ENST00000571886 OR51B2Q9Y5P1 312 aa7.81□□□□□ -1.16
GTF3C1-213ENST00000571886 A0A0G2JRQ6 117 aa7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 ANKRD20A5PA0PJZ0 165 aa7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 MFSD2BA6NFX1 497 aa7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 OR2C1O95371 312 aa7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 IGKV1-5P01602 117 aa7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 AKAIN1P0CW23 69 aa7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 TRAPPC2P0DI81 140 aa7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 TRAPPC2BP0DI82 140 aa7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 OR13C7P0DN81 318 aa7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 TBPP20226 339 aa7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 SSBP1Q04837 148 aaKnown RBP7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 DCTN2Q13561 401 aaKnown RBP7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 RPEL1Q2QD12 228 aa7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 CLEC19AQ6UXS0 136 aa7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 CADM3Q8N126 398 aa7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 OR9G4Q8NGQ1 327 aa7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 OR1L8Q8NGR8 309 aa7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 HINT2Q9BX68 163 aa7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 QTRT1Q9BXR0 403 aaKnown RBP7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 ZC4H2Q9NQZ6 224 aa7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 FAM212BQ9NTI7 297 aaPredicted RBP7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 ZMAT5Q9UDW3 170 aaKnown RBP7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 GPR132Q9UNW8 380 aa7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 ZNF256Q9Y2P7 627 aaPredicted RBP7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 DNAH9Q9NYC9 4486 aa7.8□□□□□ -1.16
GTF3C1-213ENST00000571886 IGHV3-21A0A0B4J1V1 117 aa7.79□□□□□ -1.16
GTF3C1-213ENST00000571886 C3orf85A0A1B0GTC6 90 aa7.79□□□□□ -1.16
GTF3C1-213ENST00000571886 H0Y980 276 aa7.79□□□□□ -1.16
GTF3C1-213ENST00000571886 SNAPC5O75971 98 aa7.79□□□□□ -1.16
GTF3C1-213ENST00000571886 LY86O95711 162 aa7.79□□□□□ -1.16
GTF3C1-213ENST00000571886 IGLV1-51P01701 117 aa7.79□□□□□ -1.16
GTF3C1-213ENST00000571886 SERPINE2P07093 398 aa7.79□□□□□ -1.16
GTF3C1-213ENST00000571886 CTSDP07339 412 aaPredicted RBP7.79□□□□□ -1.16
GTF3C1-213ENST00000571886 FGF2P09038 288 aa7.79□□□□□ -1.16
GTF3C1-213ENST00000571886 P0C879 139 aa7.79□□□□□ -1.16
GTF3C1-213ENST00000571886 DEFA4P12838 97 aa7.79□□□□□ -1.16
GTF3C1-213ENST00000571886 S100GP29377 79 aa7.79□□□□□ -1.16
GTF3C1-213ENST00000571886 ZNF79Q15937 498 aa7.79□□□□□ -1.16
GTF3C1-213ENST00000571886 H2BFWTQ7Z2G1 175 aa7.79□□□□□ -1.16
GTF3C1-213ENST00000571886 OR51S1Q8NGJ8 323 aa7.79□□□□□ -1.16
GTF3C1-213ENST00000571886 ZFAND1Q8TCF1 268 aa7.79□□□□□ -1.16
GTF3C1-213ENST00000571886 ZNF486Q96H40 463 aaPredicted RBP7.79□□□□□ -1.16
GTF3C1-213ENST00000571886 OR4C12Q96R67 309 aa7.79□□□□□ -1.16
GTF3C1-213ENST00000571886 THAP7Q9BT49 309 aaPredicted RBP7.79□□□□□ -1.16
GTF3C1-213ENST00000571886 C5orf66Q9H5L9 145 aa7.79□□□□□ -1.16
GTF3C1-213ENST00000571886 TMEM14BQ9NUH8 114 aa7.79□□□□□ -1.16
GTF3C1-213ENST00000571886 SELENOKQ9Y6D0 94 aa7.79□□□□□ -1.16
GTF3C1-213ENST00000571886 V9GYH0 126 aa7.79□□□□□ -1.16
GTF3C1-213ENST00000571886 A0A0B4J293 547 aa7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 IZUMO1RA6ND01 250 aa7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 C15orf61A6NNL5 157 aa7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 DISC1C4P0D8 188 aa7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 GP9P14770 177 aa7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 HIST1H1BP16401 226 aaKnown RBP7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 MECP2P51608 486 aaKnown RBP7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 MEF2DQ14814 521 aa7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 SPINK9Q5DT21 86 aa7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 C11orf87Q6NUJ2 197 aa7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 SLC25A24Q6NUK1 477 aa7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 Q6ZRM9 215 aa7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 CCDC190Q86UF4 302 aa7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 LHFPL5Q8TAF8 219 aa7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 ZNF502Q8TBZ5 544 aa7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 GLYATL2Q8WU03 294 aa7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 TRIM63Q969Q1 353 aa7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 TMEM230Q96A57 120 aa7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 SRSF8Q9BRL6 282 aaKnown RBP7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 ELOVL1Q9BW60 279 aa7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 PRR13Q9NZ81 148 aa7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 COPZ2Q9P299 210 aa7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 RABL2AQ9UBK7 228 aaPredicted RBP7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 PRNDQ9UKY0 176 aa7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 RABL2BQ9UNT1 228 aa7.78□□□□□ -1.16
GTF3C1-213ENST00000571886 IGHV3-35A0A0C4DH35 117 aa7.77□□□□□ -1.17
GTF3C1-213ENST00000571886 GGCTO75223 188 aaKnown RBP7.77□□□□□ -1.17
GTF3C1-213ENST00000571886 CLEC3BP05452 202 aa7.77□□□□□ -1.17
GTF3C1-213ENST00000571886 OR5AC1P0C628 307 aa7.77□□□□□ -1.17
GTF3C1-213ENST00000571886 UCP1P25874 307 aa7.77□□□□□ -1.17
GTF3C1-213ENST00000571886 KLF9Q13886 244 aaPredicted RBP7.77□□□□□ -1.17
GTF3C1-213ENST00000571886 PYDC2Q56P42 97 aa7.77□□□□□ -1.17
GTF3C1-213ENST00000571886 Q8N1Y9 231 aa7.77□□□□□ -1.17
GTF3C1-213ENST00000571886 GDPD1Q8N9F7 314 aa7.77□□□□□ -1.17
GTF3C1-213ENST00000571886 OR6Q1Q8NGQ2 317 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms