RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 DHFRP00374 187 aa11.16□□□□□ -0.62
LITAF-208ENST00000571627 AREGP15514 252 aa11.16□□□□□ -0.62
LITAF-208ENST00000571627 INSL3P51460 131 aa11.16□□□□□ -0.62
LITAF-208ENST00000571627 EXOSC2Q13868 293 aaKnown RBP11.16□□□□□ -0.62
LITAF-208ENST00000571627 ZNF343Q6P1L6 599 aa11.16□□□□□ -0.62
LITAF-208ENST00000571627 ACSM6Q6P461 480 aa11.16□□□□□ -0.62
LITAF-208ENST00000571627 HAPLN4Q86UW8 402 aa11.16□□□□□ -0.62
LITAF-208ENST00000571627 ZNF429Q86V71 674 aa11.16□□□□□ -0.62
LITAF-208ENST00000571627 FAM223AQ8IWN6 122 aa11.16□□□□□ -0.62
LITAF-208ENST00000571627 TRIM63Q969Q1 353 aa11.16□□□□□ -0.62
LITAF-208ENST00000571627 MRGPRFQ96AM1 343 aa11.16□□□□□ -0.62
LITAF-208ENST00000571627 MCUBQ9NWR8 336 aa11.16□□□□□ -0.62
LITAF-208ENST00000571627 FKBP11Q9NYL4 201 aa11.16□□□□□ -0.62
LITAF-208ENST00000571627 PEF1Q9UBV8 284 aaKnown RBP11.16□□□□□ -0.62
LITAF-208ENST00000571627 PRNDQ9UKY0 176 aa11.16□□□□□ -0.62
LITAF-208ENST00000571627 GPR132Q9UNW8 380 aa11.16□□□□□ -0.62
LITAF-208ENST00000571627 ZNF256Q9Y2P7 627 aaPredicted RBP11.16□□□□□ -0.62
LITAF-208ENST00000571627 TRBV9A0A0B4J1U6 114 aa11.15□□□□□ -0.62
LITAF-208ENST00000571627 CGB1A6NKQ9 187 aa11.15□□□□□ -0.62
LITAF-208ENST00000571627 OR2J3O76001 311 aa11.15□□□□□ -0.62
LITAF-208ENST00000571627 REG1AP05451 166 aa11.15□□□□□ -0.62
LITAF-208ENST00000571627 CRYGCP07315 174 aa11.15□□□□□ -0.62
LITAF-208ENST00000571627 ZP3P21754 424 aa11.15□□□□□ -0.62
LITAF-208ENST00000571627 PSMB6P28072 239 aa11.15□□□□□ -0.62
LITAF-208ENST00000571627 OR2B8PP59922 312 aa11.15□□□□□ -0.62
LITAF-208ENST00000571627 KLF9Q13886 244 aaPredicted RBP11.15□□□□□ -0.62
LITAF-208ENST00000571627 H2BFWTQ7Z2G1 175 aa11.15□□□□□ -0.62
LITAF-208ENST00000571627 HSD17B13Q7Z5P4 300 aaPredicted RBP11.15□□□□□ -0.62
LITAF-208ENST00000571627 GDPD1Q8N9F7 314 aa11.15□□□□□ -0.62
LITAF-208ENST00000571627 OR1L8Q8NGR8 309 aa11.15□□□□□ -0.62
LITAF-208ENST00000571627 SEC22AQ96IW7 307 aa11.15□□□□□ -0.62
LITAF-208ENST00000571627 RTBDNQ9BSG5 229 aaPredicted RBP11.15□□□□□ -0.62
LITAF-208ENST00000571627 QTRT1Q9BXR0 403 aaKnown RBP11.15□□□□□ -0.62
LITAF-208ENST00000571627 TEX13DA0A0J9YY54 714 aaPredicted RBP11.14□□□□□ -0.63
LITAF-208ENST00000571627 IGKV1-39P01597 117 aa11.14□□□□□ -0.63
LITAF-208ENST00000571627 IGKV1D-39P04432 117 aa11.14□□□□□ -0.63
LITAF-208ENST00000571627 TRAPPC2P0DI81 140 aa11.14□□□□□ -0.63
LITAF-208ENST00000571627 TRAPPC2BP0DI82 140 aa11.14□□□□□ -0.63
LITAF-208ENST00000571627 HIST1H1BP16401 226 aaKnown RBP11.14□□□□□ -0.63
LITAF-208ENST00000571627 SYNJ2BPP57105 145 aa11.14□□□□□ -0.63
LITAF-208ENST00000571627 ATP5G2Q06055 141 aa11.14□□□□□ -0.63
LITAF-208ENST00000571627 FAM209BQ5JX69 171 aa11.14□□□□□ -0.63
LITAF-208ENST00000571627 NECAP1Q8NC96 275 aa11.14□□□□□ -0.63
LITAF-208ENST00000571627 OR5B3Q8NH48 314 aa11.14□□□□□ -0.63
LITAF-208ENST00000571627 OR4C12Q96R67 309 aa11.14□□□□□ -0.63
LITAF-208ENST00000571627 TP53RKQ96S44 253 aa11.14□□□□□ -0.63
LITAF-208ENST00000571627 SRRQ9GZT4 340 aa11.14□□□□□ -0.63
LITAF-208ENST00000571627 C5orf66Q9H5L9 145 aa11.14□□□□□ -0.63
LITAF-208ENST00000571627 OR51B2Q9Y5P1 312 aa11.14□□□□□ -0.63
LITAF-208ENST00000571627 TEX50A0A1B0GTY4 177 aa11.13□□□□□ -0.63
LITAF-208ENST00000571627 C15orf61A6NNL5 157 aa11.13□□□□□ -0.63
LITAF-208ENST00000571627 SPNP16150 400 aa11.13□□□□□ -0.63
LITAF-208ENST00000571627 CTRB1P17538 263 aa11.13□□□□□ -0.63
LITAF-208ENST00000571627 UCP1P25874 307 aa11.13□□□□□ -0.63
LITAF-208ENST00000571627 INPP1P49441 399 aa11.13□□□□□ -0.63
LITAF-208ENST00000571627 DHODHQ02127 395 aa11.13□□□□□ -0.63
LITAF-208ENST00000571627 CD69Q07108 199 aa11.13□□□□□ -0.63
LITAF-208ENST00000571627 KLF5Q13887 457 aaPredicted RBP11.13□□□□□ -0.63
LITAF-208ENST00000571627 TRIM16LQ309B1 348 aa11.13□□□□□ -0.63
LITAF-208ENST00000571627 C15orf32Q32M92 178 aa11.13□□□□□ -0.63
LITAF-208ENST00000571627 CTRB2Q6GPI1 263 aa11.13□□□□□ -0.63
LITAF-208ENST00000571627 C11orf87Q6NUJ2 197 aa11.13□□□□□ -0.63
LITAF-208ENST00000571627 OR4A16Q8NH70 328 aa11.13□□□□□ -0.63
LITAF-208ENST00000571627 NAA60Q9H7X0 242 aa11.13□□□□□ -0.63
LITAF-208ENST00000571627 NDUFA4L2Q9NRX3 87 aa11.13□□□□□ -0.63
LITAF-208ENST00000571627 TMEM14BQ9NUH8 114 aa11.13□□□□□ -0.63
LITAF-208ENST00000571627 LSM4Q9Y4Z0 139 aaKnown RBP11.13□□□□□ -0.63
LITAF-208ENST00000571627 S4R3C0 116 aa11.13□□□□□ -0.63
LITAF-208ENST00000571627 IGLC7A0M8Q6 106 aa11.12□□□□□ -0.63
LITAF-208ENST00000571627 CRYM-AS1A6NIL9 109 aa11.12□□□□□ -0.63
LITAF-208ENST00000571627 BMPR1BO00238 502 aa11.12□□□□□ -0.63
LITAF-208ENST00000571627 CYB5BO43169 146 aa11.12□□□□□ -0.63
LITAF-208ENST00000571627 NDUFB8O95169 186 aa11.12□□□□□ -0.63
LITAF-208ENST00000571627 IGHV3-23P01764 117 aa11.12□□□□□ -0.63
LITAF-208ENST00000571627 DEFA4P12838 97 aa11.12□□□□□ -0.63
LITAF-208ENST00000571627 AKR1C2P52895 323 aa11.12□□□□□ -0.63
LITAF-208ENST00000571627 RPEL1Q2QD12 228 aa11.12□□□□□ -0.63
LITAF-208ENST00000571627 KLK9Q2XQG4 91 aa11.12□□□□□ -0.63
LITAF-208ENST00000571627 TRIQKQ629K1 86 aa11.12□□□□□ -0.63
LITAF-208ENST00000571627 ZNF57Q68EA5 555 aaPredicted RBP11.12□□□□□ -0.63
LITAF-208ENST00000571627 SGPP2Q8IWX5 399 aa11.12□□□□□ -0.63
LITAF-208ENST00000571627 OR10W1Q8NGF6 305 aa11.12□□□□□ -0.63
LITAF-208ENST00000571627 LSM10Q969L4 123 aaKnown RBP11.12□□□□□ -0.63
LITAF-208ENST00000571627 TMEM56Q96MV1 263 aa11.12□□□□□ -0.63
LITAF-208ENST00000571627 FANCD2OSQ96PS1 177 aa11.12□□□□□ -0.63
LITAF-208ENST00000571627 B9D2Q9BPU9 175 aa11.12□□□□□ -0.63
LITAF-208ENST00000571627 ELOVL1Q9BW60 279 aa11.12□□□□□ -0.63
LITAF-208ENST00000571627 TMEM222Q9H0R3 208 aa11.12□□□□□ -0.63
LITAF-208ENST00000571627 FBXL7Q9UJT9 491 aa11.12□□□□□ -0.63
LITAF-208ENST00000571627 KLK9Q9UKQ9 250 aa11.12□□□□□ -0.63
LITAF-208ENST00000571627 KCNIP3Q9Y2W7 256 aa11.12□□□□□ -0.63
LITAF-208ENST00000571627 NSG2Q9Y328 171 aa11.12□□□□□ -0.63
LITAF-208ENST00000571627 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.11□□□□□ -0.63
LITAF-208ENST00000571627 A6NHS1 94 aa11.11□□□□□ -0.63
LITAF-208ENST00000571627 PPP5D1E7EU14 171 aa11.11□□□□□ -0.63
LITAF-208ENST00000571627 OR5AC1P0C628 307 aa11.11□□□□□ -0.63
LITAF-208ENST00000571627 DCTN2Q13561 401 aaKnown RBP11.11□□□□□ -0.63
LITAF-208ENST00000571627 SP6Q3SY56 376 aa11.11□□□□□ -0.63
LITAF-208ENST00000571627 IL34Q6ZMJ4 242 aa11.11□□□□□ -0.63
LITAF-208ENST00000571627 LINC00299Q6ZSB3 139 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms