RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 OR5AU1Q8NGC0 362 aa12.69□□□□□ -0.38
USP43-202ENST00000570475 OR5R1Q8NH85 324 aa12.69□□□□□ -0.38
USP43-202ENST00000570475 BLNKQ8WV28 456 aa12.69□□□□□ -0.38
USP43-202ENST00000570475 NOL4LQ96MY1 436 aaPredicted RBP12.69□□□□□ -0.38
USP43-202ENST00000570475 COL6A6A6NMZ7 2263 aa12.69□□□□□ -0.38
USP43-202ENST00000570475 HCFC1P51610 2035 aa12.69□□□□□ -0.38
USP43-202ENST00000570475 DEFB124Q8NES8 71 aa12.68□□□□□ -0.38
USP43-202ENST00000570475 COMMD5Q9GZQ3 224 aa12.68□□□□□ -0.38
USP43-202ENST00000570475 OR51B2Q9Y5P1 312 aa12.68□□□□□ -0.38
USP43-202ENST00000570475 TRBV20OR9-2A0A075B6H5 130 aa12.68□□□□□ -0.38
USP43-202ENST00000570475 VENTXO95231 258 aa12.68□□□□□ -0.38
USP43-202ENST00000570475 TNFSF10P50591 281 aa12.68□□□□□ -0.38
USP43-202ENST00000570475 CENPWQ5EE01 88 aa12.68□□□□□ -0.38
USP43-202ENST00000570475 FAM19A2Q8N3H0 131 aa12.68□□□□□ -0.38
USP43-202ENST00000570475 F2Z2F3 143 aa12.68□□□□□ -0.38
USP43-202ENST00000570475 MGST3O14880 152 aa12.68□□□□□ -0.38
USP43-202ENST00000570475 EFNB3Q15768 340 aa12.68□□□□□ -0.38
USP43-202ENST00000570475 TDRG1Q3Y452 100 aa12.68□□□□□ -0.38
USP43-202ENST00000570475 OR4A47Q6IF82 309 aa12.68□□□□□ -0.38
USP43-202ENST00000570475 BHLHA15Q7RTS1 189 aaPredicted RBP12.68□□□□□ -0.38
USP43-202ENST00000570475 GBGT1Q8N5D6 347 aa12.68□□□□□ -0.38
USP43-202ENST00000570475 FAM216BQ8N7L0 139 aa12.68□□□□□ -0.38
USP43-202ENST00000570475 GP6Q9HCN6 339 aa12.68□□□□□ -0.38
USP43-202ENST00000570475 SLC35D1Q9NTN3 355 aa12.68□□□□□ -0.38
USP43-202ENST00000570475 IGHV2OR16-5A0A0B4J2B6 119 aa12.67□□□□□ -0.38
USP43-202ENST00000570475 KLF3P57682 345 aaPredicted RBP12.67□□□□□ -0.38
USP43-202ENST00000570475 C11orf53Q8IXP5 236 aa12.67□□□□□ -0.38
USP43-202ENST00000570475 MDS2Q8NDY4 140 aa12.67□□□□□ -0.38
USP43-202ENST00000570475 IGHV3-72A0A0B4J1Y9 119 aa12.67□□□□□ -0.38
USP43-202ENST00000570475 AGMATQ9BSE5 352 aa12.67□□□□□ -0.38
USP43-202ENST00000570475 IGKV1D-17A0A075B6S4 117 aa12.67□□□□□ -0.38
USP43-202ENST00000570475 GGCTO75223 188 aaKnown RBP12.67□□□□□ -0.38
USP43-202ENST00000570475 KIR2DL2P43627 348 aaPredicted RBP12.67□□□□□ -0.38
USP43-202ENST00000570475 OR10W1Q8NGF6 305 aa12.67□□□□□ -0.38
USP43-202ENST00000570475 KIAA1549Q9HCM3 1950 aa12.67□□□□□ -0.38
USP43-202ENST00000570475 PMS2P5A8MQ11 134 aa12.66□□□□□ -0.38
USP43-202ENST00000570475 SS18L1O75177 396 aaPredicted RBP12.66□□□□□ -0.38
USP43-202ENST00000570475 REG1AP05451 166 aa12.66□□□□□ -0.38
USP43-202ENST00000570475 TRIP6Q15654 476 aaKnown RBP12.66□□□□□ -0.38
USP43-202ENST00000570475 STUMQ69YW2 141 aa12.66□□□□□ -0.38
USP43-202ENST00000570475 RBMXL3Q8N7X1 1067 aaKnown RBP12.66□□□□□ -0.38
USP43-202ENST00000570475 NABP2Q9BQ15 211 aa12.66□□□□□ -0.38
USP43-202ENST00000570475 WNT10AQ9GZT5 417 aa12.66□□□□□ -0.38
USP43-202ENST00000570475 ZNF586Q9NXT0 402 aa12.66□□□□□ -0.38
USP43-202ENST00000570475 ELOVL5Q9NYP7 299 aa12.66□□□□□ -0.38
USP43-202ENST00000570475 ADAMTS20P59510 1910 aa12.66□□□□□ -0.38
USP43-202ENST00000570475 SAA2-SAA4A0A096LPE2 208 aa12.66□□□□□ -0.38
USP43-202ENST00000570475 GFRA3O60609 400 aa12.66□□□□□ -0.38
USP43-202ENST00000570475 SAA2P0DJI9 122 aaPredicted RBP12.66□□□□□ -0.38
USP43-202ENST00000570475 TFPI2P48307 235 aa12.66□□□□□ -0.38
USP43-202ENST00000570475 UBE2L3P68036 154 aaKnown RBP12.66□□□□□ -0.38
USP43-202ENST00000570475 TNFAIP6P98066 277 aaPredicted RBP12.66□□□□□ -0.38
USP43-202ENST00000570475 KRTCAP3Q53RY4 240 aa12.66□□□□□ -0.38
USP43-202ENST00000570475 TRAT1Q6PIZ9 186 aa12.66□□□□□ -0.38
USP43-202ENST00000570475 WFDC8Q8IUA0 241 aa12.66□□□□□ -0.38
USP43-202ENST00000570475 ZNF331Q9NQX6 463 aaPredicted RBP12.66□□□□□ -0.38
USP43-202ENST00000570475 ORM2P19652 201 aa12.66□□□□□ -0.38
USP43-202ENST00000570475 OPRK1P41145 380 aa12.66□□□□□ -0.38
USP43-202ENST00000570475 OR9G1Q8NH87 305 aa12.66□□□□□ -0.38
USP43-202ENST00000570475 LINC00479Q96M42 142 aa12.66□□□□□ -0.38
USP43-202ENST00000570475 DCAF16Q9NXF7 216 aa12.66□□□□□ -0.38
USP43-202ENST00000570475 NAV3Q8IVL0 2385 aa12.65□□□□□ -0.38
USP43-202ENST00000570475 TRAV5A0A0B4J249 113 aa12.65□□□□□ -0.38
USP43-202ENST00000570475 CD59P13987 128 aa12.65□□□□□ -0.38
USP43-202ENST00000570475 CHRNB4P30926 498 aa12.65□□□□□ -0.38
USP43-202ENST00000570475 HSPE1P61604 102 aaKnown RBP12.65□□□□□ -0.38
USP43-202ENST00000570475 MZT1Q08AG7 82 aa12.65□□□□□ -0.38
USP43-202ENST00000570475 SNHG12Q9BXW3 62 aa12.65□□□□□ -0.38
USP43-202ENST00000570475 IGHV1-18A0A0C4DH31 117 aa12.65□□□□□ -0.38
USP43-202ENST00000570475 PROP1O75360 226 aa12.65□□□□□ -0.38
USP43-202ENST00000570475 CDKN1AP38936 164 aa12.65□□□□□ -0.38
USP43-202ENST00000570475 ARSJQ5FYB0 599 aaPredicted RBP12.65□□□□□ -0.38
USP43-202ENST00000570475 CCL17Q92583 94 aa12.65□□□□□ -0.38
USP43-202ENST00000570475 TANC2Q9HCD6 1990 aa12.65□□□□□ -0.38
USP43-202ENST00000570475 SRIP30626 198 aa12.65□□□□□ -0.39
USP43-202ENST00000570475 LCN2P80188 198 aa12.65□□□□□ -0.39
USP43-202ENST00000570475 GCSAMQ8N6F7 178 aa12.65□□□□□ -0.39
USP43-202ENST00000570475 PPIAL4AQ9Y536 164 aa12.65□□□□□ -0.39
USP43-202ENST00000570475 ZFHX4Q86UP3 3567 aa12.64□□□□□ -0.39
USP43-202ENST00000570475 STAG3L2P0CL84 134 aa12.64□□□□□ -0.39
USP43-202ENST00000570475 STAG3L3P0CL85 134 aa12.64□□□□□ -0.39
USP43-202ENST00000570475 RANP62826 216 aaKnown RBP12.64□□□□□ -0.39
USP43-202ENST00000570475 WDR31Q8NA23 367 aa12.64□□□□□ -0.39
USP43-202ENST00000570475 BORCS7Q96B45 105 aa12.64□□□□□ -0.39
USP43-202ENST00000570475 POLR3KQ9Y2Y1 108 aaPredicted RBP12.64□□□□□ -0.39
USP43-202ENST00000570475 TRAV17A0A0B4J275 112 aa12.64□□□□□ -0.39
USP43-202ENST00000570475 RELBQ01201 579 aa12.64□□□□□ -0.39
USP43-202ENST00000570475 RTL8BQ17RB0 113 aa12.64□□□□□ -0.39
USP43-202ENST00000570475 RPRMLQ8N4K4 120 aa12.64□□□□□ -0.39
USP43-202ENST00000570475 OR10X1Q8NGY0 326 aa12.64□□□□□ -0.39
USP43-202ENST00000570475 TMEM68Q96MH6 324 aa12.64□□□□□ -0.39
USP43-202ENST00000570475 DIRC3C9JPN6 131 aa12.63□□□□□ -0.39
USP43-202ENST00000570475 MPDU1O75352 247 aa12.63□□□□□ -0.39
USP43-202ENST00000570475 IGKV1-16P04430 117 aa12.63□□□□□ -0.39
USP43-202ENST00000570475 CT45A1Q5HYN5 189 aa12.63□□□□□ -0.39
USP43-202ENST00000570475 OR2T6Q8NHC8 308 aa12.63□□□□□ -0.39
USP43-202ENST00000570475 CT45A3Q8NHU0 189 aa12.63□□□□□ -0.39
USP43-202ENST00000570475 Q8TCH9 128 aa12.63□□□□□ -0.39
USP43-202ENST00000570475 ZCCHC14Q8WYQ9 949 aaKnown RBP12.63□□□□□ -0.39
USP43-202ENST00000570475 SLC35E1Q96K37 410 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms