RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 NSG2Q9Y328 171 aa9.95□□□□□ -0.82
CNOT1-220ENST00000569916 MFSD2BA6NFX1 497 aa9.94□□□□□ -0.82
CNOT1-220ENST00000569916 C15orf61A6NNL5 157 aa9.94□□□□□ -0.82
CNOT1-220ENST00000569916 PPP5D1E7EU14 171 aa9.94□□□□□ -0.82
CNOT1-220ENST00000569916 TRAPPC2P0DI81 140 aa9.94□□□□□ -0.82
CNOT1-220ENST00000569916 TRAPPC2BP0DI82 140 aa9.94□□□□□ -0.82
CNOT1-220ENST00000569916 DEFA4P12838 97 aa9.94□□□□□ -0.82
CNOT1-220ENST00000569916 GP9P14770 177 aa9.94□□□□□ -0.82
CNOT1-220ENST00000569916 PIGPP57054 158 aa9.94□□□□□ -0.82
CNOT1-220ENST00000569916 WT1-ASQ06250 92 aa9.94□□□□□ -0.82
CNOT1-220ENST00000569916 FAM209BQ5JX69 171 aa9.94□□□□□ -0.82
CNOT1-220ENST00000569916 FAAP20Q6NZ36 180 aa9.94□□□□□ -0.82
CNOT1-220ENST00000569916 OR1L8Q8NGR8 309 aa9.94□□□□□ -0.82
CNOT1-220ENST00000569916 TERB2Q8NHR7 220 aa9.94□□□□□ -0.82
CNOT1-220ENST00000569916 SEC22AQ96IW7 307 aa9.94□□□□□ -0.82
CNOT1-220ENST00000569916 RBM38Q9H0Z9 239 aaKnown RBP9.94□□□□□ -0.82
CNOT1-220ENST00000569916 NDUFA4L2Q9NRX3 87 aa9.94□□□□□ -0.82
CNOT1-220ENST00000569916 RABL2AQ9UBK7 228 aaPredicted RBP9.94□□□□□ -0.82
CNOT1-220ENST00000569916 RABL2BQ9UNT1 228 aa9.94□□□□□ -0.82
CNOT1-220ENST00000569916 S4R3C0 116 aa9.94□□□□□ -0.82
CNOT1-220ENST00000569916 SORL1Q92673 2214 aa9.94□□□□□ -0.82
CNOT1-220ENST00000569916 DBX1A6NMT0 343 aa9.93□□□□□ -0.82
CNOT1-220ENST00000569916 H0Y980 276 aa9.93□□□□□ -0.82
CNOT1-220ENST00000569916 SNAPC5O75971 98 aa9.93□□□□□ -0.82
CNOT1-220ENST00000569916 IGHV3-23P01764 117 aa9.93□□□□□ -0.82
CNOT1-220ENST00000569916 CSN3P07498 182 aa9.93□□□□□ -0.82
CNOT1-220ENST00000569916 CD69Q07108 199 aa9.93□□□□□ -0.82
CNOT1-220ENST00000569916 MEF2DQ14814 521 aa9.93□□□□□ -0.82
CNOT1-220ENST00000569916 SCGB2B2Q4G0G5 96 aa9.93□□□□□ -0.82
CNOT1-220ENST00000569916 HSD17B13Q7Z5P4 300 aaPredicted RBP9.93□□□□□ -0.82
CNOT1-220ENST00000569916 GDPD1Q8N9F7 314 aa9.93□□□□□ -0.82
CNOT1-220ENST00000569916 OR13C8Q8NGS7 320 aa9.93□□□□□ -0.82
CNOT1-220ENST00000569916 MCFD2Q8NI22 146 aa9.93□□□□□ -0.82
CNOT1-220ENST00000569916 EEF1AKMT3Q96AZ1 226 aa9.93□□□□□ -0.82
CNOT1-220ENST00000569916 TP53RKQ96S44 253 aa9.93□□□□□ -0.82
CNOT1-220ENST00000569916 TSC22D3Q99576 134 aa9.93□□□□□ -0.82
CNOT1-220ENST00000569916 SOSTQ9BQB4 213 aa9.93□□□□□ -0.82
CNOT1-220ENST00000569916 TMEM14BQ9NUH8 114 aa9.93□□□□□ -0.82
CNOT1-220ENST00000569916 PRNDQ9UKY0 176 aa9.93□□□□□ -0.82
CNOT1-220ENST00000569916 OR51B2Q9Y5P1 312 aa9.93□□□□□ -0.82
CNOT1-220ENST00000569916 GSTZ1O43708 216 aaPredicted RBP9.92□□□□□ -0.82
CNOT1-220ENST00000569916 HLA-AP01891 365 aaKnown RBP9.92□□□□□ -0.82
CNOT1-220ENST00000569916 SERPINE2P07093 398 aa9.92□□□□□ -0.82
CNOT1-220ENST00000569916 OR13C7P0DN81 318 aa9.92□□□□□ -0.82
CNOT1-220ENST00000569916 TNFSF8P32971 234 aa9.92□□□□□ -0.82
CNOT1-220ENST00000569916 TATDN3Q17R31 274 aa9.92□□□□□ -0.82
CNOT1-220ENST00000569916 C11orf87Q6NUJ2 197 aa9.92□□□□□ -0.82
CNOT1-220ENST00000569916 CLEC19AQ6UXS0 136 aa9.92□□□□□ -0.82
CNOT1-220ENST00000569916 OR4C16Q8NGL9 310 aa9.92□□□□□ -0.82
CNOT1-220ENST00000569916 OR5B3Q8NH48 314 aa9.92□□□□□ -0.82
CNOT1-220ENST00000569916 ZFAND1Q8TCF1 268 aa9.92□□□□□ -0.82
CNOT1-220ENST00000569916 MARCH1Q8TCQ1 289 aa9.92□□□□□ -0.82
CNOT1-220ENST00000569916 LSM10Q969L4 123 aaKnown RBP9.92□□□□□ -0.82
CNOT1-220ENST00000569916 HINT2Q9BX68 163 aa9.92□□□□□ -0.82
CNOT1-220ENST00000569916 SIGLEC8Q9NYZ4 499 aa9.92□□□□□ -0.82
CNOT1-220ENST00000569916 RSL24D1Q9UHA3 163 aaKnown RBP9.92□□□□□ -0.82
CNOT1-220ENST00000569916 C3orf85A0A1B0GTC6 90 aa9.91□□□□□ -0.82
CNOT1-220ENST00000569916 CCDC160A6NGH7 325 aa9.91□□□□□ -0.82
CNOT1-220ENST00000569916 GGCTO75223 188 aaKnown RBP9.91□□□□□ -0.82
CNOT1-220ENST00000569916 CTSDP07339 412 aaPredicted RBP9.91□□□□□ -0.82
CNOT1-220ENST00000569916 P0C879 139 aa9.91□□□□□ -0.82
CNOT1-220ENST00000569916 AKAIN1P0CW23 69 aa9.91□□□□□ -0.82
CNOT1-220ENST00000569916 ARL3P36405 182 aa9.91□□□□□ -0.82
CNOT1-220ENST00000569916 MFAP2P55001 183 aa9.91□□□□□ -0.82
CNOT1-220ENST00000569916 H2BFWTQ7Z2G1 175 aa9.91□□□□□ -0.82
CNOT1-220ENST00000569916 CCDC71LQ8N9Z2 235 aa9.91□□□□□ -0.82
CNOT1-220ENST00000569916 CXorf58Q96LI9 332 aa9.91□□□□□ -0.82
CNOT1-220ENST00000569916 FKBP11Q9NYL4 201 aa9.91□□□□□ -0.82
CNOT1-220ENST00000569916 COPZ2Q9P299 210 aa9.91□□□□□ -0.82
CNOT1-220ENST00000569916 PEMTQ9UBM1 199 aa9.91□□□□□ -0.82
CNOT1-220ENST00000569916 SMAD5-AS1Q9Y6J3 95 aa9.91□□□□□ -0.82
CNOT1-220ENST00000569916 TRBV7-1A0A0A6YYK4 115 aa9.9□□□□□ -0.82
CNOT1-220ENST00000569916 ANKRD20A5PA0PJZ0 165 aa9.9□□□□□ -0.82
CNOT1-220ENST00000569916 FABP12A6NFH5 140 aa9.9□□□□□ -0.82
CNOT1-220ENST00000569916 DISC1C4P0D8 188 aa9.9□□□□□ -0.82
CNOT1-220ENST00000569916 OR2C1O95371 312 aa9.9□□□□□ -0.82
CNOT1-220ENST00000569916 IGKV1-5P01602 117 aa9.9□□□□□ -0.82
CNOT1-220ENST00000569916 UCP1P25874 307 aa9.9□□□□□ -0.82
CNOT1-220ENST00000569916 SURF2Q15527 256 aaPredicted RBP9.9□□□□□ -0.82
CNOT1-220ENST00000569916 IZUMO4Q1ZYL8 232 aa9.9□□□□□ -0.82
CNOT1-220ENST00000569916 ADAMTSL5Q6ZMM2 481 aa9.9□□□□□ -0.82
CNOT1-220ENST00000569916 ZNF502Q8TBZ5 544 aa9.9□□□□□ -0.82
CNOT1-220ENST00000569916 TMEM56Q96MV1 263 aa9.9□□□□□ -0.82
CNOT1-220ENST00000569916 THYN1Q9P016 225 aa9.9□□□□□ -0.82
CNOT1-220ENST00000569916 F11RQ9Y624 299 aaKnown RBP9.9□□□□□ -0.82
CNOT1-220ENST00000569916 LGALS9O00182 355 aa9.89□□□□□ -0.83
CNOT1-220ENST00000569916 CYB5BO43169 146 aa9.89□□□□□ -0.83
CNOT1-220ENST00000569916 EDN2P20800 178 aa9.89□□□□□ -0.83
CNOT1-220ENST00000569916 GPR183P32249 361 aa9.89□□□□□ -0.83
CNOT1-220ENST00000569916 MECP2P51608 486 aaKnown RBP9.89□□□□□ -0.83
CNOT1-220ENST00000569916 PRCDQ00LT1 54 aa9.89□□□□□ -0.83
CNOT1-220ENST00000569916 SP6Q3SY56 376 aa9.89□□□□□ -0.83
CNOT1-220ENST00000569916 SLC25A24Q6NUK1 477 aa9.89□□□□□ -0.83
CNOT1-220ENST00000569916 GPHB5Q86YW7 130 aa9.89□□□□□ -0.83
CNOT1-220ENST00000569916 OR4A16Q8NH70 328 aa9.89□□□□□ -0.83
CNOT1-220ENST00000569916 VN1R17PQ8TDU5 208 aa9.89□□□□□ -0.83
CNOT1-220ENST00000569916 RTBDNQ9BSG5 229 aaPredicted RBP9.89□□□□□ -0.83
CNOT1-220ENST00000569916 C5orf66Q9H5L9 145 aa9.89□□□□□ -0.83
CNOT1-220ENST00000569916 SLC2A8Q9NY64 477 aa9.89□□□□□ -0.83
CNOT1-220ENST00000569916 C14orf166Q9Y224 244 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms