RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 FANCD2OSQ96PS1 177 aa10.62□□□□□ -0.71
HERPUD1-218ENST00000569569 PRRT1Q99946 306 aa10.62□□□□□ -0.71
HERPUD1-218ENST00000569569 THAP7Q9BT49 309 aaPredicted RBP10.62□□□□□ -0.71
HERPUD1-218ENST00000569569 QTRT1Q9BXR0 403 aaKnown RBP10.62□□□□□ -0.71
HERPUD1-218ENST00000569569 FKBP11Q9NYL4 201 aa10.62□□□□□ -0.71
HERPUD1-218ENST00000569569 KLK9Q9UKQ9 250 aa10.62□□□□□ -0.71
HERPUD1-218ENST00000569569 C3orf85A0A1B0GTC6 90 aa10.61□□□□□ -0.71
HERPUD1-218ENST00000569569 H0Y980 276 aa10.61□□□□□ -0.71
HERPUD1-218ENST00000569569 IGKV1-39P01597 117 aa10.61□□□□□ -0.71
HERPUD1-218ENST00000569569 IGKV1D-39P04432 117 aa10.61□□□□□ -0.71
HERPUD1-218ENST00000569569 REG1AP05451 166 aa10.61□□□□□ -0.71
HERPUD1-218ENST00000569569 DEFA4P12838 97 aa10.61□□□□□ -0.71
HERPUD1-218ENST00000569569 EXOSC2Q13868 293 aaKnown RBP10.61□□□□□ -0.71
HERPUD1-218ENST00000569569 SURF2Q15527 256 aaPredicted RBP10.61□□□□□ -0.71
HERPUD1-218ENST00000569569 H2BFWTQ7Z2G1 175 aa10.61□□□□□ -0.71
HERPUD1-218ENST00000569569 MRGPRFQ96AM1 343 aa10.61□□□□□ -0.71
HERPUD1-218ENST00000569569 NDUFA4L2Q9NRX3 87 aa10.61□□□□□ -0.71
HERPUD1-218ENST00000569569 NDUFA13Q9P0J0 144 aa10.61□□□□□ -0.71
HERPUD1-218ENST00000569569 FBXL7Q9UJT9 491 aa10.61□□□□□ -0.71
HERPUD1-218ENST00000569569 PRNDQ9UKY0 176 aa10.61□□□□□ -0.71
HERPUD1-218ENST00000569569 C14orf166Q9Y224 244 aaKnown RBP10.61□□□□□ -0.71
HERPUD1-218ENST00000569569 NSG2Q9Y328 171 aa10.61□□□□□ -0.71
HERPUD1-218ENST00000569569 OR51B2Q9Y5P1 312 aa10.61□□□□□ -0.71
HERPUD1-218ENST00000569569 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.6□□□□□ -0.71
HERPUD1-218ENST00000569569 WI2-2373I1.2A0A1W2PRP0 233 aa10.6□□□□□ -0.71
HERPUD1-218ENST00000569569 IGLC7A0M8Q6 106 aa10.6□□□□□ -0.71
HERPUD1-218ENST00000569569 K7EIL1 84 aa10.6□□□□□ -0.71
HERPUD1-218ENST00000569569 SAP30O75446 220 aa10.6□□□□□ -0.71
HERPUD1-218ENST00000569569 B3GALNT1O75752 331 aa10.6□□□□□ -0.71
HERPUD1-218ENST00000569569 TRBV12-3P01733 135 aa10.6□□□□□ -0.71
HERPUD1-218ENST00000569569 KLF5Q13887 457 aaPredicted RBP10.6□□□□□ -0.71
HERPUD1-218ENST00000569569 TATDN3Q17R31 274 aa10.6□□□□□ -0.71
HERPUD1-218ENST00000569569 RPEL1Q2QD12 228 aa10.6□□□□□ -0.71
HERPUD1-218ENST00000569569 PYDC2Q56P42 97 aa10.6□□□□□ -0.71
HERPUD1-218ENST00000569569 C19orf35Q6ZS72 473 aa10.6□□□□□ -0.71
HERPUD1-218ENST00000569569 CCDC190Q86UF4 302 aa10.6□□□□□ -0.71
HERPUD1-218ENST00000569569 OR10W1Q8NGF6 305 aa10.6□□□□□ -0.71
HERPUD1-218ENST00000569569 OR51S1Q8NGJ8 323 aa10.6□□□□□ -0.71
HERPUD1-218ENST00000569569 OR5B3Q8NH48 314 aa10.6□□□□□ -0.71
HERPUD1-218ENST00000569569 OR4A16Q8NH70 328 aa10.6□□□□□ -0.71
HERPUD1-218ENST00000569569 TP53RKQ96S44 253 aa10.6□□□□□ -0.71
HERPUD1-218ENST00000569569 ELOVL1Q9BW60 279 aa10.6□□□□□ -0.71
HERPUD1-218ENST00000569569 SLC2A8Q9NY64 477 aa10.6□□□□□ -0.71
HERPUD1-218ENST00000569569 SCP2D1Q9UJQ7 156 aa10.6□□□□□ -0.71
HERPUD1-218ENST00000569569 GPR132Q9UNW8 380 aa10.6□□□□□ -0.71
HERPUD1-218ENST00000569569 IGLV11-55A0A075B6I3 123 aa10.59□□□□□ -0.71
HERPUD1-218ENST00000569569 C15orf61A6NNL5 157 aa10.59□□□□□ -0.71
HERPUD1-218ENST00000569569 ATG12O94817 140 aa10.59□□□□□ -0.71
HERPUD1-218ENST00000569569 NDUFB8O95169 186 aa10.59□□□□□ -0.71
HERPUD1-218ENST00000569569 OR13C7P0DN81 318 aa10.59□□□□□ -0.71
HERPUD1-218ENST00000569569 DEFB121Q5J5C9 76 aa10.59□□□□□ -0.71
HERPUD1-218ENST00000569569 Q8N402 240 aa10.59□□□□□ -0.71
HERPUD1-218ENST00000569569 GDPD1Q8N9F7 314 aa10.59□□□□□ -0.71
HERPUD1-218ENST00000569569 LSM10Q969L4 123 aaKnown RBP10.59□□□□□ -0.71
HERPUD1-218ENST00000569569 TMEM56Q96MV1 263 aa10.59□□□□□ -0.71
HERPUD1-218ENST00000569569 SCGB3A2Q96PL1 93 aa10.59□□□□□ -0.71
HERPUD1-218ENST00000569569 OR4C12Q96R67 309 aa10.59□□□□□ -0.71
HERPUD1-218ENST00000569569 RTBDNQ9BSG5 229 aaPredicted RBP10.59□□□□□ -0.71
HERPUD1-218ENST00000569569 HINT2Q9BX68 163 aa10.59□□□□□ -0.71
HERPUD1-218ENST00000569569 TMEM14BQ9NUH8 114 aa10.59□□□□□ -0.71
HERPUD1-218ENST00000569569 THYN1Q9P016 225 aa10.59□□□□□ -0.71
HERPUD1-218ENST00000569569 V9GYH0 126 aa10.59□□□□□ -0.71
HERPUD1-218ENST00000569569 CYB5BO43169 146 aa10.58□□□□□ -0.72
HERPUD1-218ENST00000569569 UCP1P25874 307 aa10.58□□□□□ -0.72
HERPUD1-218ENST00000569569 FAUP35544 74 aaKnown RBP10.58□□□□□ -0.72
HERPUD1-218ENST00000569569 ETV6P41212 452 aa10.58□□□□□ -0.72
HERPUD1-218ENST00000569569 SYNJ2BPP57105 145 aa10.58□□□□□ -0.72
HERPUD1-218ENST00000569569 AP3S2P59780 193 aa10.58□□□□□ -0.72
HERPUD1-218ENST00000569569 WT1-ASQ06250 92 aa10.58□□□□□ -0.72
HERPUD1-218ENST00000569569 ZNF79Q15937 498 aa10.58□□□□□ -0.72
HERPUD1-218ENST00000569569 TRIM16LQ309B1 348 aa10.58□□□□□ -0.72
HERPUD1-218ENST00000569569 SP6Q3SY56 376 aa10.58□□□□□ -0.72
HERPUD1-218ENST00000569569 SPANXN2Q5MJ10 180 aa10.58□□□□□ -0.72
HERPUD1-218ENST00000569569 TOMM5Q8N4H5 51 aa10.58□□□□□ -0.72
HERPUD1-218ENST00000569569 EEF1AKMT3Q96AZ1 226 aa10.58□□□□□ -0.72
HERPUD1-218ENST00000569569 CXorf58Q96LI9 332 aa10.58□□□□□ -0.72
HERPUD1-218ENST00000569569 C5orf66Q9H5L9 145 aa10.58□□□□□ -0.72
HERPUD1-218ENST00000569569 MCUBQ9NWR8 336 aa10.58□□□□□ -0.72
HERPUD1-218ENST00000569569 TEX13DA0A0J9YY54 714 aaPredicted RBP10.57□□□□□ -0.72
HERPUD1-218ENST00000569569 DBX1A6NMT0 343 aa10.57□□□□□ -0.72
HERPUD1-218ENST00000569569 BMPR1BO00238 502 aa10.57□□□□□ -0.72
HERPUD1-218ENST00000569569 AKR1C2P52895 323 aa10.57□□□□□ -0.72
HERPUD1-218ENST00000569569 SLC25A24Q6NUK1 477 aa10.57□□□□□ -0.72
HERPUD1-218ENST00000569569 OR9G4Q8NGQ1 327 aa10.57□□□□□ -0.72
HERPUD1-218ENST00000569569 OR6Q1Q8NGQ2 317 aa10.57□□□□□ -0.72
HERPUD1-218ENST00000569569 DEDD2Q8WXF8 326 aa10.57□□□□□ -0.72
HERPUD1-218ENST00000569569 TRIM63Q969Q1 353 aa10.57□□□□□ -0.72
HERPUD1-218ENST00000569569 NAA60Q9H7X0 242 aa10.57□□□□□ -0.72
HERPUD1-218ENST00000569569 ZNF256Q9Y2P7 627 aaPredicted RBP10.57□□□□□ -0.72
HERPUD1-218ENST00000569569 TRBV7-1A0A0A6YYK4 115 aa10.56□□□□□ -0.72
HERPUD1-218ENST00000569569 GGCTO75223 188 aaKnown RBP10.56□□□□□ -0.72
HERPUD1-218ENST00000569569 CDS2O95674 445 aa10.56□□□□□ -0.72
HERPUD1-218ENST00000569569 IGKV1-5P01602 117 aa10.56□□□□□ -0.72
HERPUD1-218ENST00000569569 IGHV3-23P01764 117 aa10.56□□□□□ -0.72
HERPUD1-218ENST00000569569 OR5AC1P0C628 307 aa10.56□□□□□ -0.72
HERPUD1-218ENST00000569569 P0C879 139 aa10.56□□□□□ -0.72
HERPUD1-218ENST00000569569 MECP2P51608 486 aaKnown RBP10.56□□□□□ -0.72
HERPUD1-218ENST00000569569 HSPE1P61604 102 aaKnown RBP10.56□□□□□ -0.72
HERPUD1-218ENST00000569569 DHODHQ02127 395 aa10.56□□□□□ -0.72
HERPUD1-218ENST00000569569 DCTN2Q13561 401 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms