RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 A0A0G2JLM5 398 aa6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 TEX13DA0A0J9YY54 714 aaPredicted RBP6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 C3orf85A0A1B0GTC6 90 aa6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 ANKRD20A5PA0PJZ0 165 aa6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 NXPH3O95157 252 aa6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 SERPINE2P07093 398 aa6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 PSMB6P28072 239 aa6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 AKR1C2P52895 323 aa6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 UCP3P55916 312 aa6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 SYNJ2BPP57105 145 aa6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 MRPS10P82664 201 aaKnown RBP6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 FHL3Q13643 280 aa6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 MEF2DQ14814 521 aa6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 C15orf32Q32M92 178 aa6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 ZNF57Q68EA5 555 aaPredicted RBP6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 SLC25A24Q6NUK1 477 aa6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 CLEC19AQ6UXS0 136 aa6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 Q8N402 240 aa6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 OR4A5Q8NH83 315 aa6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 ZFAND1Q8TCF1 268 aa6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 QTRT1Q9BXR0 403 aaKnown RBP6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 RANGRFQ9HD47 186 aaPredicted RBP6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 COMMD9Q9P000 198 aa6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 PEF1Q9UBV8 284 aaKnown RBP6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 V9GYH0 126 aa6.94□□□□□ -1.3
GTF3C1-210ENST00000569394 IGHV3-35A0A0C4DH35 117 aa6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 MFSD2BA6NFX1 497 aa6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 H3BUA1 57 aa6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 K7EIL1 84 aa6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 CTDSPLO15194 276 aa6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 DUS4LO95620 317 aaKnown RBP6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 OR5AC1P0C628 307 aa6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 TRAPPC2P0DI81 140 aa6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 TRAPPC2BP0DI82 140 aa6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 AKR1C4P17516 323 aa6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 TBPP20226 339 aa6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 EDN2P20800 178 aa6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 MAS1LP35410 378 aa6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 RUNX1Q01196 453 aa6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 ZNF79Q15937 498 aa6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 RPEL1Q2QD12 228 aa6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 KPRPQ5T749 579 aaPredicted RBP6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 LCE2CQ5TA81 110 aa6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 TMED4Q7Z7H5 227 aa6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 TOMM5Q8N4H5 51 aa6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 CCDC71LQ8N9Z2 235 aa6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 OR4C12Q96R67 309 aa6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 RTBDNQ9BSG5 229 aaPredicted RBP6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 ZNF257Q9Y2Q1 563 aa6.93□□□□□ -1.3
GTF3C1-210ENST00000569394 A0A0G2JRQ6 117 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 IGLC7A0M8Q6 106 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 FAM223BA6NKX1 122 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 NPIPB5A8MRT5 1133 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 GSTZ1O43708 216 aaPredicted RBP6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 EIF4EBP3O60516 100 aaPredicted RBP6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 OR2C1O95371 312 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 IGHV3-48P01763 117 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 CTSDP07339 412 aaPredicted RBP6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 CTRB1P17538 263 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 INPP1P49441 399 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 SSBP1Q04837 148 aaKnown RBP6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 WT1-ASQ06250 92 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 POU2AF1Q16633 256 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 CTRB2Q6GPI1 263 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 ZNF343Q6P1L6 599 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 SLC25A42Q86VD7 318 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 FAM223AQ8IWN6 122 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 UBAC2Q8NBM4 344 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 NECAP1Q8NC96 275 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 OR1L8Q8NGR8 309 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 SEC22AQ96IW7 307 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 USMG5Q96IX5 58 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 FANCD2OSQ96PS1 177 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 PRRT1Q99946 306 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 SOSTQ9BQB4 213 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 C5orf66Q9H5L9 145 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 PFDN2Q9UHV9 154 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 DMRT1Q9Y5R6 373 aa6.92□□□□□ -1.3
GTF3C1-210ENST00000569394 IGHV3OR16-8A0A075B7F1 116 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 ZNF320A2RRD8 509 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 H0Y980 276 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 BMPR1BO00238 502 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 TPPPO94811 219 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 DHFRP00374 187 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 IFNA17P01571 189 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 IGKV1-5P01602 117 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 SPNP16150 400 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 GPR183P32249 361 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 ETV6P41212 452 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 RND3P61587 244 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 SPANXN2Q5MJ10 180 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 CCDC190Q86UF4 302 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 OR6Q1Q8NGQ2 317 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 LHFPL5Q8TAF8 219 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 PINX1Q96BK5 328 aaKnown RBP6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 MISP3Q96FF7 219 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 ZNF486Q96H40 463 aaPredicted RBP6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 ELOVL1Q9BW60 279 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 GPR61Q9BZJ8 451 aa6.91□□□□□ -1.3
GTF3C1-210ENST00000569394 NAA60Q9H7X0 242 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms