RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 SLIRPQ9GZT3 109 aaKnown RBP7.11□□□□□ -1.27
CAPN3-219ENST00000569136 RANGRFQ9HD47 186 aaPredicted RBP7.11□□□□□ -1.27
CAPN3-219ENST00000569136 HRASLSQ9HDD0 168 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 FKBP11Q9NYL4 201 aa7.11□□□□□ -1.27
CAPN3-219ENST00000569136 DPPA5A6NC42 116 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 DISC1C4P0D8 188 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 LINC01619G3V211 115 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 UPK2O00526 184 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 GSTZ1O43708 216 aaPredicted RBP7.1□□□□□ -1.27
CAPN3-219ENST00000569136 B3GALNT1O75752 331 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 SNAPC5O75971 98 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 ATG12O94817 140 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 SERPINE2P07093 398 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 ZNF735P0CB33 412 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 RPA2P15927 270 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 HIST1H1BP16401 226 aaKnown RBP7.1□□□□□ -1.27
CAPN3-219ENST00000569136 ZP3P21754 424 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 PTBP1P26599 531 aaKnown RBP eCLIP7.1□□□□□ -1.27
CAPN3-219ENST00000569136 S100A5P33763 92 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 LPAR6P43657 344 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 RPL27AP46776 148 aaKnown RBP7.1□□□□□ -1.27
CAPN3-219ENST00000569136 RAB25P57735 213 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 RND3P61587 244 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 ATP5G2Q06055 141 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 TATDN3Q17R31 274 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 THOC7Q6I9Y2 204 aaKnown RBP7.1□□□□□ -1.27
CAPN3-219ENST00000569136 OR4A47Q6IF82 309 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 STEAP1BQ6NZ63 245 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 SSX9Q7RTT3 188 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 HSD17B13Q7Z5P4 300 aaPredicted RBP7.1□□□□□ -1.27
CAPN3-219ENST00000569136 ZNF429Q86V71 674 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 NECAP1Q8NC96 275 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 ADAD2Q8NCV1 583 aaKnown RBP7.1□□□□□ -1.27
CAPN3-219ENST00000569136 DMBX1Q8NFW5 382 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 SMIM4Q8WVI0 70 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 SCGB3A2Q96PL1 93 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 TSC22D3Q99576 134 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 COMMD5Q9GZQ3 224 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 GNB4Q9HAV0 340 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 ZNF257Q9Y2Q1 563 aa7.1□□□□□ -1.27
CAPN3-219ENST00000569136 FAM223BA6NKX1 122 aa7.09□□□□□ -1.27
CAPN3-219ENST00000569136 NPIPB5A8MRT5 1133 aa7.09□□□□□ -1.27
CAPN3-219ENST00000569136 M0QYG6 137 aa7.09□□□□□ -1.27
CAPN3-219ENST00000569136 CYB5BO43169 146 aa7.09□□□□□ -1.27
CAPN3-219ENST00000569136 CRYGCP07315 174 aa7.09□□□□□ -1.27
CAPN3-219ENST00000569136 AKAIN1P0CW23 69 aa7.09□□□□□ -1.27
CAPN3-219ENST00000569136 PGAM2P15259 253 aa7.09□□□□□ -1.27
CAPN3-219ENST00000569136 DGCR2P98153 550 aa7.09□□□□□ -1.27
CAPN3-219ENST00000569136 EGFEM1PQ0D2K5 195 aa7.09□□□□□ -1.27
CAPN3-219ENST00000569136 DCTN2Q13561 401 aaKnown RBP7.09□□□□□ -1.27
CAPN3-219ENST00000569136 SURF2Q15527 256 aaPredicted RBP7.09□□□□□ -1.27
CAPN3-219ENST00000569136 KLK9Q2XQG4 91 aa7.09□□□□□ -1.27
CAPN3-219ENST00000569136 DEFB136Q30KP8 78 aa7.09□□□□□ -1.27
CAPN3-219ENST00000569136 C9orf66Q5T8R8 295 aa7.09□□□□□ -1.27
CAPN3-219ENST00000569136 ASPHD1Q5U4P2 390 aa7.09□□□□□ -1.27
CAPN3-219ENST00000569136 LHFPL1Q86WI0 220 aa7.09□□□□□ -1.27
CAPN3-219ENST00000569136 FAM223AQ8IWN6 122 aa7.09□□□□□ -1.27
CAPN3-219ENST00000569136 CCDC71LQ8N9Z2 235 aa7.09□□□□□ -1.27
CAPN3-219ENST00000569136 OR1L8Q8NGR8 309 aa7.09□□□□□ -1.27
CAPN3-219ENST00000569136 DUX3Q96PT4 197 aa7.09□□□□□ -1.27
CAPN3-219ENST00000569136 FYTTD1Q96QD9 318 aaKnown RBP7.09□□□□□ -1.27
CAPN3-219ENST00000569136 OR5B12Q96R08 314 aa7.09□□□□□ -1.27
CAPN3-219ENST00000569136 PRRT1Q99946 306 aa7.09□□□□□ -1.27
CAPN3-219ENST00000569136 ELOVL1Q9BW60 279 aa7.09□□□□□ -1.27
CAPN3-219ENST00000569136 AURKAIP1Q9NWT8 199 aaPredicted RBP7.09□□□□□ -1.27
CAPN3-219ENST00000569136 COA4Q9NYJ1 87 aa7.09□□□□□ -1.27
CAPN3-219ENST00000569136 KLK9Q9UKQ9 250 aa7.09□□□□□ -1.27
CAPN3-219ENST00000569136 TRBV9A0A0B4J1U6 114 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 KRTAP4-8A0A0G2JLE6 195 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 MARCH11A6NNE9 402 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 SEC14L6B5MCN3 397 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 OVOL1O14753 267 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 S1PR2O95136 353 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 KRASP01116 189 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 RLN1P04808 185 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 TRAPPC2P0DI81 140 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 TRAPPC2BP0DI82 140 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 PSMB6P28072 239 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 AP3S2P59780 193 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 OR2B8PP59922 312 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 RHOGP84095 191 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 ZNF585BQ52M93 769 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 PHLDA2Q53GA4 152 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 ZNF343Q6P1L6 599 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 TBC1D26Q86UD7 250 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 CASTOR1Q8WTX7 329 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 DEDD2Q8WXF8 326 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 DCUN1D4Q92564 292 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 THAP7Q9BT49 309 aaPredicted RBP7.08□□□□□ -1.28
CAPN3-219ENST00000569136 FXYD6Q9H0Q3 95 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 THYN1Q9P016 225 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 COPZ2Q9P299 210 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 PEF1Q9UBV8 284 aaKnown RBP7.08□□□□□ -1.28
CAPN3-219ENST00000569136 SCP2D1Q9UJQ7 156 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 PRNDQ9UKY0 176 aa7.08□□□□□ -1.28
CAPN3-219ENST00000569136 KRTAP23-1A1A580 65 aa7.07□□□□□ -1.28
CAPN3-219ENST00000569136 TEX22C9J3V5 150 aa7.07□□□□□ -1.28
CAPN3-219ENST00000569136 SCAF4O95104 1147 aaKnown RBP7.07□□□□□ -1.28
CAPN3-219ENST00000569136 IGHV3-11P01762 117 aa7.07□□□□□ -1.28
CAPN3-219ENST00000569136 CTSDP07339 412 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms