RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 NMSQ5H8A3 153 aa12.93□□□□□ -0.34
CNEP1R1-210ENST00000568890 MZT2BQ6NZ67 158 aa12.93□□□□□ -0.34
CNEP1R1-210ENST00000568890 NDUFA11Q86Y39 141 aa12.93□□□□□ -0.34
CNEP1R1-210ENST00000568890 DUSP18Q8NEJ0 188 aa12.93□□□□□ -0.34
CNEP1R1-210ENST00000568890 IL22RA2Q969J5 263 aa12.93□□□□□ -0.34
CNEP1R1-210ENST00000568890 RRNAD1Q96FB5 475 aaKnown RBP12.93□□□□□ -0.34
CNEP1R1-210ENST00000568890 TMEM68Q96MH6 324 aa12.93□□□□□ -0.34
CNEP1R1-210ENST00000568890 HLA-AP01891 365 aaKnown RBP12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 CTRB1P17538 263 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 UBE2MP61081 183 aaKnown RBP12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 SPINK9Q5DT21 86 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 CXorf66Q5JRM2 361 aaPredicted RBP12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 KHDC1LQ5JSQ8 128 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 CTRB2Q6GPI1 263 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 ZNF429Q86V71 674 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 LRTM2Q8N967 370 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 OR5M8Q8NGP6 311 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 OR1L8Q8NGR8 309 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 OR4A16Q8NH70 328 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 FAM110DQ8TAY7 271 aaPredicted RBP12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 FANCD2OSQ96PS1 177 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 TSC22D3Q99576 134 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 HINT2Q9BX68 163 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 GNB4Q9HAV0 340 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 PRNDQ9UKY0 176 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 NOTCH3Q9UM47 2321 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 A0A0B4J2A0 478 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 ST8SIA3O43173 380 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 CRYGCP07315 174 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 H2AFB2P0C5Z0 115 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 TRAPPC2P0DI81 140 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 TRAPPC2BP0DI82 140 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 SPNP16150 400 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 CDX1P47902 265 aaPredicted RBP12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 MECP2P51608 486 aaKnown RBP12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 TMEM65Q6PI78 240 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 LYG2Q86SG7 212 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 LGI3Q8N145 548 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 LSM10Q969L4 123 aaKnown RBP12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 ZNF355PQ9NSJ1 428 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 CACNG5Q9UF02 275 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 SHPKQ9UHJ6 478 aa12.92□□□□□ -0.34
CNEP1R1-210ENST00000568890 ANXA3P12429 323 aa12.91□□□□□ -0.34
CNEP1R1-210ENST00000568890 PSMB6P28072 239 aa12.91□□□□□ -0.34
CNEP1R1-210ENST00000568890 HSPE1P61604 102 aaKnown RBP12.91□□□□□ -0.34
CNEP1R1-210ENST00000568890 AARDQ4LEZ3 155 aa12.91□□□□□ -0.34
CNEP1R1-210ENST00000568890 C4orf46Q504U0 113 aa12.91□□□□□ -0.34
CNEP1R1-210ENST00000568890 C8orf86Q6ZUL3 223 aa12.91□□□□□ -0.34
CNEP1R1-210ENST00000568890 OR5B3Q8NH48 314 aa12.91□□□□□ -0.34
CNEP1R1-210ENST00000568890 DUX3Q96PT4 197 aa12.91□□□□□ -0.34
CNEP1R1-210ENST00000568890 OR5B12Q96R08 314 aa12.91□□□□□ -0.34
CNEP1R1-210ENST00000568890 SEC22CQ9BRL7 303 aa12.91□□□□□ -0.34
CNEP1R1-210ENST00000568890 ZFP57Q9NU63 452 aa12.91□□□□□ -0.34
CNEP1R1-210ENST00000568890 TRBV9A0A0B4J1U6 114 aa12.9□□□□□ -0.34
CNEP1R1-210ENST00000568890 NPIPB5A8MRT5 1133 aa12.9□□□□□ -0.34
CNEP1R1-210ENST00000568890 MPTX1A8MV57 137 aa12.9□□□□□ -0.34
CNEP1R1-210ENST00000568890 ADAP1O75689 374 aa12.9□□□□□ -0.34
CNEP1R1-210ENST00000568890 OR13C7P0DN81 318 aa12.9□□□□□ -0.34
CNEP1R1-210ENST00000568890 DEFB136Q30KP8 78 aa12.9□□□□□ -0.34
CNEP1R1-210ENST00000568890 UBE2E2Q96LR5 201 aa12.9□□□□□ -0.34
CNEP1R1-210ENST00000568890 COA4Q9NYJ1 87 aa12.9□□□□□ -0.34
CNEP1R1-210ENST00000568890 FKBP11Q9NYL4 201 aa12.9□□□□□ -0.34
CNEP1R1-210ENST00000568890 ZNF257Q9Y2Q1 563 aa12.9□□□□□ -0.34
CNEP1R1-210ENST00000568890 I3L521 148 aa12.9□□□□□ -0.34
CNEP1R1-210ENST00000568890 ATG12O94817 140 aa12.9□□□□□ -0.34
CNEP1R1-210ENST00000568890 DUS4LO95620 317 aaKnown RBP12.9□□□□□ -0.34
CNEP1R1-210ENST00000568890 TRGV3P03979 118 aa12.9□□□□□ -0.34
CNEP1R1-210ENST00000568890 MFAP2P55001 183 aa12.9□□□□□ -0.34
CNEP1R1-210ENST00000568890 C11orf87Q6NUJ2 197 aa12.9□□□□□ -0.34
CNEP1R1-210ENST00000568890 FAM219AQ8IW50 185 aa12.9□□□□□ -0.34
CNEP1R1-210ENST00000568890 NXPH3O95157 252 aa12.89□□□□□ -0.35
CNEP1R1-210ENST00000568890 BRI3O95415 125 aa12.89□□□□□ -0.35
CNEP1R1-210ENST00000568890 IGHV3-11P01762 117 aa12.89□□□□□ -0.35
CNEP1R1-210ENST00000568890 HOXB5P09067 269 aa12.89□□□□□ -0.35
CNEP1R1-210ENST00000568890 TPPP2P59282 170 aa12.89□□□□□ -0.35
CNEP1R1-210ENST00000568890 PRCDQ00LT1 54 aa12.89□□□□□ -0.35
CNEP1R1-210ENST00000568890 ETV3LQ6ZN32 361 aa12.89□□□□□ -0.35
CNEP1R1-210ENST00000568890 KLHL30-AS1Q8NEE0 82 aa12.89□□□□□ -0.35
CNEP1R1-210ENST00000568890 RNASE11Q8TAA1 199 aaKnown RBP12.89□□□□□ -0.35
CNEP1R1-210ENST00000568890 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.89□□□□□ -0.35
CNEP1R1-210ENST00000568890 GGNBP1Q5YKI7 109 aa12.89□□□□□ -0.35
CNEP1R1-210ENST00000568890 ENKURQ8TC29 256 aa12.89□□□□□ -0.35
CNEP1R1-210ENST00000568890 MITD1Q8WV92 249 aa12.89□□□□□ -0.35
CNEP1R1-210ENST00000568890 RAX2Q96IS3 184 aa12.89□□□□□ -0.35
CNEP1R1-210ENST00000568890 SLA2Q9H6Q3 261 aa12.89□□□□□ -0.35
CNEP1R1-210ENST00000568890 PITX3O75364 302 aa12.88□□□□□ -0.35
CNEP1R1-210ENST00000568890 SRPXP78539 464 aa12.88□□□□□ -0.35
CNEP1R1-210ENST00000568890 KLK9Q2XQG4 91 aa12.88□□□□□ -0.35
CNEP1R1-210ENST00000568890 MARVELD1Q9BSK0 173 aa12.88□□□□□ -0.35
CNEP1R1-210ENST00000568890 KLK9Q9UKQ9 250 aa12.88□□□□□ -0.35
CNEP1R1-210ENST00000568890 H3BUA1 57 aa12.87□□□□□ -0.35
CNEP1R1-210ENST00000568890 M0QZ24 198 aa12.87□□□□□ -0.35
CNEP1R1-210ENST00000568890 OR2J3O76001 311 aa12.87□□□□□ -0.35
CNEP1R1-210ENST00000568890 IFNA17P01571 189 aa12.87□□□□□ -0.35
CNEP1R1-210ENST00000568890 RHOGP84095 191 aa12.87□□□□□ -0.35
CNEP1R1-210ENST00000568890 C2orf68Q2NKX9 166 aa12.87□□□□□ -0.35
CNEP1R1-210ENST00000568890 SRSF8Q9BRL6 282 aaKnown RBP12.87□□□□□ -0.35
CNEP1R1-210ENST00000568890 NBEAL1Q6ZS30 2694 aa12.87□□□□□ -0.35
CNEP1R1-210ENST00000568890 IGLV11-55A0A075B6I3 123 aa12.87□□□□□ -0.35
CNEP1R1-210ENST00000568890 NDUFB8O95169 186 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms