RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 THYN1Q9P016 225 aa10.06□□□□□ -0.8
CLK3-224ENST00000568605 IGHV4OR15-8A0A075B7B6 117 aa10.05□□□□□ -0.8
CLK3-224ENST00000568605 A0A087WW49 117 aa10.05□□□□□ -0.8
CLK3-224ENST00000568605 TRAV3A0A0B4J244 114 aa10.05□□□□□ -0.8
CLK3-224ENST00000568605 CRYGCP07315 174 aa10.05□□□□□ -0.8
CLK3-224ENST00000568605 ANXA3P12429 323 aa10.05□□□□□ -0.8
CLK3-224ENST00000568605 UCP1P25874 307 aa10.05□□□□□ -0.8
CLK3-224ENST00000568605 MECP2P51608 486 aaKnown RBP10.05□□□□□ -0.8
CLK3-224ENST00000568605 DHODHQ02127 395 aa10.05□□□□□ -0.8
CLK3-224ENST00000568605 ZNF45Q02386 682 aa10.05□□□□□ -0.8
CLK3-224ENST00000568605 EXOSC2Q13868 293 aaKnown RBP10.05□□□□□ -0.8
CLK3-224ENST00000568605 SGPP2Q8IWX5 399 aa10.05□□□□□ -0.8
CLK3-224ENST00000568605 RRNAD1Q96FB5 475 aaKnown RBP10.05□□□□□ -0.8
CLK3-224ENST00000568605 PDCD10Q9BUL8 212 aa10.05□□□□□ -0.8
CLK3-224ENST00000568605 HINT2Q9BX68 163 aa10.05□□□□□ -0.8
CLK3-224ENST00000568605 ALX4Q9H161 411 aaPredicted RBP10.05□□□□□ -0.8
CLK3-224ENST00000568605 C5orf66Q9H5L9 145 aa10.05□□□□□ -0.8
CLK3-224ENST00000568605 GPR132Q9UNW8 380 aa10.05□□□□□ -0.8
CLK3-224ENST00000568605 KCNIP3Q9Y2W7 256 aa10.05□□□□□ -0.8
CLK3-224ENST00000568605 OR51B2Q9Y5P1 312 aa10.05□□□□□ -0.8
CLK3-224ENST00000568605 MEGF8Q7Z7M0 2845 aa10.04□□□□□ -0.8
CLK3-224ENST00000568605 TRBV9A0A0B4J1U6 114 aa10.04□□□□□ -0.8
CLK3-224ENST00000568605 CRYM-AS1A6NIL9 109 aa10.04□□□□□ -0.8
CLK3-224ENST00000568605 SEC14L6B5MCN3 397 aa10.04□□□□□ -0.8
CLK3-224ENST00000568605 OVOL1O14753 267 aa10.04□□□□□ -0.8
CLK3-224ENST00000568605 OR5AC1P0C628 307 aa10.04□□□□□ -0.8
CLK3-224ENST00000568605 MYOD1P15172 320 aa10.04□□□□□ -0.8
CLK3-224ENST00000568605 AREGP15514 252 aa10.04□□□□□ -0.8
CLK3-224ENST00000568605 CTRB1P17538 263 aa10.04□□□□□ -0.8
CLK3-224ENST00000568605 ATP5G2Q06055 141 aa10.04□□□□□ -0.8
CLK3-224ENST00000568605 C15orf32Q32M92 178 aa10.04□□□□□ -0.8
CLK3-224ENST00000568605 CTRB2Q6GPI1 263 aa10.04□□□□□ -0.8
CLK3-224ENST00000568605 RTBDNQ9BSG5 229 aaPredicted RBP10.04□□□□□ -0.8
CLK3-224ENST00000568605 TMEM222Q9H0R3 208 aa10.04□□□□□ -0.8
CLK3-224ENST00000568605 AKIP1Q9NQ31 210 aa10.04□□□□□ -0.8
CLK3-224ENST00000568605 TMEM14BQ9NUH8 114 aa10.04□□□□□ -0.8
CLK3-224ENST00000568605 PEF1Q9UBV8 284 aaKnown RBP10.04□□□□□ -0.8
CLK3-224ENST00000568605 NSG2Q9Y328 171 aa10.04□□□□□ -0.8
CLK3-224ENST00000568605 SORL1Q92673 2214 aa10.03□□□□□ -0.8
CLK3-224ENST00000568605 IGLC7A0M8Q6 106 aa10.03□□□□□ -0.8
CLK3-224ENST00000568605 NAP1L6A6NFF2 107 aa10.03□□□□□ -0.8
CLK3-224ENST00000568605 CENPXA8MT69 81 aa10.03□□□□□ -0.8
CLK3-224ENST00000568605 E7EUB6 86 aa10.03□□□□□ -0.8
CLK3-224ENST00000568605 OR2J3O76001 311 aa10.03□□□□□ -0.8
CLK3-224ENST00000568605 IGKV1-39P01597 117 aa10.03□□□□□ -0.8
CLK3-224ENST00000568605 PRH1P02810 166 aa10.03□□□□□ -0.8
CLK3-224ENST00000568605 IGKV1D-39P04432 117 aa10.03□□□□□ -0.8
CLK3-224ENST00000568605 REG1AP05451 166 aa10.03□□□□□ -0.8
CLK3-224ENST00000568605 INSL3P51460 131 aa10.03□□□□□ -0.8
CLK3-224ENST00000568605 SLURP1P55000 103 aa10.03□□□□□ -0.8
CLK3-224ENST00000568605 SRPXP78539 464 aa10.03□□□□□ -0.8
CLK3-224ENST00000568605 DEFA5Q01523 94 aa10.03□□□□□ -0.8
CLK3-224ENST00000568605 RBMS2Q15434 407 aaKnown RBP10.03□□□□□ -0.8
CLK3-224ENST00000568605 ZNF343Q6P1L6 599 aa10.03□□□□□ -0.8
CLK3-224ENST00000568605 LINC00299Q6ZSB3 139 aa10.03□□□□□ -0.8
CLK3-224ENST00000568605 FAM219AQ8IW50 185 aa10.03□□□□□ -0.8
CLK3-224ENST00000568605 OR1L6Q8NGR2 347 aa10.03□□□□□ -0.8
CLK3-224ENST00000568605 RBPMSQ93062 196 aaKnown RBP10.03□□□□□ -0.8
CLK3-224ENST00000568605 CXorf58Q96LI9 332 aa10.03□□□□□ -0.8
CLK3-224ENST00000568605 SLC25A21Q9BQT8 299 aaPredicted RBP10.03□□□□□ -0.8
CLK3-224ENST00000568605 NDUFA4L2Q9NRX3 87 aa10.03□□□□□ -0.8
CLK3-224ENST00000568605 FBXL7Q9UJT9 491 aa10.03□□□□□ -0.8
CLK3-224ENST00000568605 TEX50A0A1B0GTY4 177 aa10.02□□□□□ -0.81
CLK3-224ENST00000568605 A0A1B0GW64 132 aa10.02□□□□□ -0.81
CLK3-224ENST00000568605 ANKRD34BA5PLL1 514 aa10.02□□□□□ -0.81
CLK3-224ENST00000568605 CGB1A6NKQ9 187 aa10.02□□□□□ -0.81
CLK3-224ENST00000568605 OR13C7P0DN81 318 aa10.02□□□□□ -0.81
CLK3-224ENST00000568605 HOXD3P31249 432 aaPredicted RBP10.02□□□□□ -0.81
CLK3-224ENST00000568605 PRCDQ00LT1 54 aa10.02□□□□□ -0.81
CLK3-224ENST00000568605 TATDN3Q17R31 274 aa10.02□□□□□ -0.81
CLK3-224ENST00000568605 RPEL1Q2QD12 228 aa10.02□□□□□ -0.81
CLK3-224ENST00000568605 SP6Q3SY56 376 aa10.02□□□□□ -0.81
CLK3-224ENST00000568605 ZNF429Q86V71 674 aa10.02□□□□□ -0.81
CLK3-224ENST00000568605 SLC35G3Q8N808 338 aa10.02□□□□□ -0.81
CLK3-224ENST00000568605 DCUN1D4Q92564 292 aa10.02□□□□□ -0.81
CLK3-224ENST00000568605 EEF1AKMT3Q96AZ1 226 aa10.02□□□□□ -0.81
CLK3-224ENST00000568605 GALNT14Q96FL9 552 aa10.02□□□□□ -0.81
CLK3-224ENST00000568605 C7orf50Q9BRJ6 194 aaKnown RBP10.02□□□□□ -0.81
CLK3-224ENST00000568605 PLEKHA3Q9HB20 300 aa10.02□□□□□ -0.81
CLK3-224ENST00000568605 IGLV11-55A0A075B6I3 123 aa10.01□□□□□ -0.81
CLK3-224ENST00000568605 WIPF1O43516 503 aa10.01□□□□□ -0.81
CLK3-224ENST00000568605 CDS2O95674 445 aa10.01□□□□□ -0.81
CLK3-224ENST00000568605 IGKV1-5P01602 117 aa10.01□□□□□ -0.81
CLK3-224ENST00000568605 AKR1C4P17516 323 aa10.01□□□□□ -0.81
CLK3-224ENST00000568605 TMEM268Q5VZI3 342 aa10.01□□□□□ -0.81
CLK3-224ENST00000568605 TMED4Q7Z7H5 227 aa10.01□□□□□ -0.81
CLK3-224ENST00000568605 OR10W1Q8NGF6 305 aa10.01□□□□□ -0.81
CLK3-224ENST00000568605 GLYATL2Q8WU03 294 aa10.01□□□□□ -0.81
CLK3-224ENST00000568605 S100ZQ8WXG8 99 aa10.01□□□□□ -0.81
CLK3-224ENST00000568605 IL22RA2Q969J5 263 aa10.01□□□□□ -0.81
CLK3-224ENST00000568605 ELOVL1Q9BW60 279 aa10.01□□□□□ -0.81
CLK3-224ENST00000568605 BATF3Q9NR55 127 aa10.01□□□□□ -0.81
CLK3-224ENST00000568605 CACFD1Q9UGQ2 172 aa10.01□□□□□ -0.81
CLK3-224ENST00000568605 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10□□□□□ -0.81
CLK3-224ENST00000568605 TRBV7-1A0A0A6YYK4 115 aa10□□□□□ -0.81
CLK3-224ENST00000568605 SAP30O75446 220 aa10□□□□□ -0.81
CLK3-224ENST00000568605 IFNA17P01571 189 aa10□□□□□ -0.81
CLK3-224ENST00000568605 HSPE1P61604 102 aaKnown RBP10□□□□□ -0.81
CLK3-224ENST00000568605 ERHP84090 104 aaKnown RBP10□□□□□ -0.81
CLK3-224ENST00000568605 WT1-ASQ06250 92 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms