RNA–Protein interactions for RNA: ENST00000566269.6

MSLN-206, Transcript of mesothelin, humanhuman

TSL 3

Gene MSLN, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-206ENST00000566269 TSC22D3Q99576 134 aa13.56□□□□□ -0.24
MSLN-206ENST00000566269 ELOVL1Q9BW60 279 aa13.56□□□□□ -0.24
MSLN-206ENST00000566269 PRNDQ9UKY0 176 aa13.56□□□□□ -0.24
MSLN-206ENST00000566269 SORL1Q92673 2214 aa13.56□□□□□ -0.24
MSLN-206ENST00000566269 ZNF701M0R085 212 aaPredicted RBP13.55□□□□□ -0.24
MSLN-206ENST00000566269 IGKV1-39P01597 117 aa13.55□□□□□ -0.24
MSLN-206ENST00000566269 IGKV1D-39P04432 117 aa13.55□□□□□ -0.24
MSLN-206ENST00000566269 SYNJ2BPP57105 145 aa13.55□□□□□ -0.24
MSLN-206ENST00000566269 THOC7Q6I9Y2 204 aaKnown RBP13.55□□□□□ -0.24
MSLN-206ENST00000566269 H2BFWTQ7Z2G1 175 aa13.55□□□□□ -0.24
MSLN-206ENST00000566269 SEC22AQ96IW7 307 aa13.55□□□□□ -0.24
MSLN-206ENST00000566269 FANCD2OSQ96PS1 177 aa13.55□□□□□ -0.24
MSLN-206ENST00000566269 OR4C12Q96R67 309 aa13.55□□□□□ -0.24
MSLN-206ENST00000566269 TP53RKQ96S44 253 aa13.55□□□□□ -0.24
MSLN-206ENST00000566269 SOSTQ9BQB4 213 aa13.55□□□□□ -0.24
MSLN-206ENST00000566269 SRSF8Q9BRL6 282 aaKnown RBP13.55□□□□□ -0.24
MSLN-206ENST00000566269 C14orf166Q9Y224 244 aaKnown RBP13.55□□□□□ -0.24
MSLN-206ENST00000566269 S4R3C0 116 aa13.55□□□□□ -0.24
MSLN-206ENST00000566269 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.54□□□□□ -0.24
MSLN-206ENST00000566269 C3orf85A0A1B0GTC6 90 aa13.54□□□□□ -0.24
MSLN-206ENST00000566269 ANKRD20A5PA0PJZ0 165 aa13.54□□□□□ -0.24
MSLN-206ENST00000566269 C15orf61A6NNL5 157 aa13.54□□□□□ -0.24
MSLN-206ENST00000566269 NDUFB8O95169 186 aa13.54□□□□□ -0.24
MSLN-206ENST00000566269 IGHV3-23P01764 117 aa13.54□□□□□ -0.24
MSLN-206ENST00000566269 CTSDP07339 412 aaPredicted RBP13.54□□□□□ -0.24
MSLN-206ENST00000566269 OR13C7P0DN81 318 aa13.54□□□□□ -0.24
MSLN-206ENST00000566269 HIST1H1BP16401 226 aaKnown RBP13.54□□□□□ -0.24
MSLN-206ENST00000566269 PTBP1P26599 531 aaKnown RBP eCLIP13.54□□□□□ -0.24
MSLN-206ENST00000566269 MECP2P51608 486 aaKnown RBP13.54□□□□□ -0.24
MSLN-206ENST00000566269 TRIM16LQ309B1 348 aa13.54□□□□□ -0.24
MSLN-206ENST00000566269 PYDC2Q56P42 97 aa13.54□□□□□ -0.24
MSLN-206ENST00000566269 CADM3Q8N126 398 aa13.54□□□□□ -0.24
MSLN-206ENST00000566269 OR51S1Q8NGJ8 323 aa13.54□□□□□ -0.24
MSLN-206ENST00000566269 OR4A16Q8NH70 328 aa13.54□□□□□ -0.24
MSLN-206ENST00000566269 LSM10Q969L4 123 aaKnown RBP13.54□□□□□ -0.24
MSLN-206ENST00000566269 PRRT1Q99946 306 aa13.54□□□□□ -0.24
MSLN-206ENST00000566269 MCUBQ9NWR8 336 aa13.54□□□□□ -0.24
MSLN-206ENST00000566269 FKBP11Q9NYL4 201 aa13.54□□□□□ -0.24
MSLN-206ENST00000566269 ZNF256Q9Y2P7 627 aaPredicted RBP13.54□□□□□ -0.24
MSLN-206ENST00000566269 IGLV11-55A0A075B6I3 123 aa13.53□□□□□ -0.24
MSLN-206ENST00000566269 PPP5D1E7EU14 171 aa13.53□□□□□ -0.24
MSLN-206ENST00000566269 BMPR1BO00238 502 aa13.53□□□□□ -0.24
MSLN-206ENST00000566269 AKR1C2P52895 323 aa13.53□□□□□ -0.24
MSLN-206ENST00000566269 KLF5Q13887 457 aaPredicted RBP13.53□□□□□ -0.24
MSLN-206ENST00000566269 HSD17B13Q7Z5P4 300 aaPredicted RBP13.53□□□□□ -0.24
MSLN-206ENST00000566269 HAPLN4Q86UW8 402 aa13.53□□□□□ -0.24
MSLN-206ENST00000566269 GDPD1Q8N9F7 314 aa13.53□□□□□ -0.24
MSLN-206ENST00000566269 OR9G4Q8NGQ1 327 aa13.53□□□□□ -0.24
MSLN-206ENST00000566269 OR6Q1Q8NGQ2 317 aa13.53□□□□□ -0.24
MSLN-206ENST00000566269 OR5B3Q8NH48 314 aa13.53□□□□□ -0.24
MSLN-206ENST00000566269 EEF1AKMT3Q96AZ1 226 aa13.53□□□□□ -0.24
MSLN-206ENST00000566269 THAP7Q9BT49 309 aaPredicted RBP13.53□□□□□ -0.24
MSLN-206ENST00000566269 NDUFA4L2Q9NRX3 87 aa13.53□□□□□ -0.24
MSLN-206ENST00000566269 TMEM14BQ9NUH8 114 aa13.53□□□□□ -0.24
MSLN-206ENST00000566269 V9GYH0 126 aa13.53□□□□□ -0.24
MSLN-206ENST00000566269 DNAH9Q9NYC9 4486 aa13.53□□□□□ -0.24
MSLN-206ENST00000566269 DBX1A6NMT0 343 aa13.52□□□□□ -0.25
MSLN-206ENST00000566269 CYB5BO43169 146 aa13.52□□□□□ -0.25
MSLN-206ENST00000566269 WT1-ASQ06250 92 aa13.52□□□□□ -0.25
MSLN-206ENST00000566269 SURF2Q15527 256 aaPredicted RBP13.52□□□□□ -0.25
MSLN-206ENST00000566269 TATDN3Q17R31 274 aa13.52□□□□□ -0.25
MSLN-206ENST00000566269 SP6Q3SY56 376 aa13.52□□□□□ -0.25
MSLN-206ENST00000566269 FAM209BQ5JX69 171 aa13.52□□□□□ -0.25
MSLN-206ENST00000566269 Q8N402 240 aa13.52□□□□□ -0.25
MSLN-206ENST00000566269 SCP2D1Q9UJQ7 156 aa13.52□□□□□ -0.25
MSLN-206ENST00000566269 TEX13DA0A0J9YY54 714 aaPredicted RBP13.51□□□□□ -0.25
MSLN-206ENST00000566269 MFSD2BA6NFX1 497 aa13.51□□□□□ -0.25
MSLN-206ENST00000566269 ATG12O94817 140 aa13.51□□□□□ -0.25
MSLN-206ENST00000566269 DCTN2Q13561 401 aaKnown RBP13.51□□□□□ -0.25
MSLN-206ENST00000566269 CLEC19AQ6UXS0 136 aa13.51□□□□□ -0.25
MSLN-206ENST00000566269 RNASE11Q8TAA1 199 aaKnown RBP13.51□□□□□ -0.25
MSLN-206ENST00000566269 CCDC140Q96MF4 163 aa13.51□□□□□ -0.25
MSLN-206ENST00000566269 TMEM56Q96MV1 263 aa13.51□□□□□ -0.25
MSLN-206ENST00000566269 C5orf66Q9H5L9 145 aa13.51□□□□□ -0.25
MSLN-206ENST00000566269 THYN1Q9P016 225 aa13.51□□□□□ -0.25
MSLN-206ENST00000566269 IGKV1-5P01602 117 aa13.5□□□□□ -0.25
MSLN-206ENST00000566269 HLA-AP01891 365 aaKnown RBP13.5□□□□□ -0.25
MSLN-206ENST00000566269 SPNP16150 400 aa13.5□□□□□ -0.25
MSLN-206ENST00000566269 ARL3P36405 182 aa13.5□□□□□ -0.25
MSLN-206ENST00000566269 IZUMO4Q1ZYL8 232 aa13.5□□□□□ -0.25
MSLN-206ENST00000566269 KLK9Q2XQG4 91 aa13.5□□□□□ -0.25
MSLN-206ENST00000566269 SLC25A24Q6NUK1 477 aa13.5□□□□□ -0.25
MSLN-206ENST00000566269 CCDC190Q86UF4 302 aa13.5□□□□□ -0.25
MSLN-206ENST00000566269 TRIM63Q969Q1 353 aa13.5□□□□□ -0.25
MSLN-206ENST00000566269 CXorf58Q96LI9 332 aa13.5□□□□□ -0.25
MSLN-206ENST00000566269 RTBDNQ9BSG5 229 aaPredicted RBP13.5□□□□□ -0.25
MSLN-206ENST00000566269 NAA60Q9H7X0 242 aa13.5□□□□□ -0.25
MSLN-206ENST00000566269 SLC2A8Q9NY64 477 aa13.5□□□□□ -0.25
MSLN-206ENST00000566269 KLK9Q9UKQ9 250 aa13.5□□□□□ -0.25
MSLN-206ENST00000566269 DMRT1Q9Y5R6 373 aa13.5□□□□□ -0.25
MSLN-206ENST00000566269 GGCTO75223 188 aaKnown RBP13.49□□□□□ -0.25
MSLN-206ENST00000566269 B3GALNT1O75752 331 aa13.49□□□□□ -0.25
MSLN-206ENST00000566269 OR5AC1P0C628 307 aa13.49□□□□□ -0.25
MSLN-206ENST00000566269 UCP1P25874 307 aa13.49□□□□□ -0.25
MSLN-206ENST00000566269 FAUP35544 74 aaKnown RBP13.49□□□□□ -0.25
MSLN-206ENST00000566269 AP3S2P59780 193 aa13.49□□□□□ -0.25
MSLN-206ENST00000566269 ZNF79Q15937 498 aa13.49□□□□□ -0.25
MSLN-206ENST00000566269 SPANXN2Q5MJ10 180 aa13.49□□□□□ -0.25
MSLN-206ENST00000566269 TOMM5Q8N4H5 51 aa13.49□□□□□ -0.25
MSLN-206ENST00000566269 TMEM222Q9H0R3 208 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms