RNA–Protein interactions for RNA: ENST00000565688.5

CLN3-218, Transcript of CLN3, battenin, humanhuman

TSL 3

Gene CLN3, Length 650 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-218ENST00000565688 GNRHRP30968 328 aa14.03□□□□□ -0.16
CLN3-218ENST00000565688 KCTD21Q4G0X4 260 aa14.03□□□□□ -0.16
CLN3-218ENST00000565688 DHRS11Q6UWP2 260 aa14.03□□□□□ -0.16
CLN3-218ENST00000565688 BTNL8Q6UX41 500 aa14.03□□□□□ -0.16
CLN3-218ENST00000565688 UNQ9165/PRO28630Q6UXU0 137 aa14.03□□□□□ -0.16
CLN3-218ENST00000565688 RBPMS2Q6ZRY4 209 aaKnown RBP14.03□□□□□ -0.16
CLN3-218ENST00000565688 GDPD1Q8N9F7 314 aa14.03□□□□□ -0.16
CLN3-218ENST00000565688 GGTLC1Q9BX51 225 aa14.03□□□□□ -0.16
CLN3-218ENST00000565688 EHFQ9NZC4 300 aa14.03□□□□□ -0.16
CLN3-218ENST00000565688 MEIS3P1A6NDR6 274 aa14.02□□□□□ -0.17
CLN3-218ENST00000565688 UBE2NLQ5JXB2 153 aa14.02□□□□□ -0.17
CLN3-218ENST00000565688 CADM3Q8N126 398 aa14.02□□□□□ -0.17
CLN3-218ENST00000565688 OR10W1Q8NGF6 305 aa14.02□□□□□ -0.17
CLN3-218ENST00000565688 OR1L8Q8NGR8 309 aa14.02□□□□□ -0.17
CLN3-218ENST00000565688 ZNF436Q9C0F3 470 aaPredicted RBP14.02□□□□□ -0.17
CLN3-218ENST00000565688 SELENOKQ9Y6D0 94 aa14.02□□□□□ -0.17
CLN3-218ENST00000565688 LOC102724200A0A096LPH7 203 aaPredicted RBP14.01□□□□□ -0.17
CLN3-218ENST00000565688 MARCH11A6NNE9 402 aa14.01□□□□□ -0.17
CLN3-218ENST00000565688 TGOLN2O43493 480 aa14.01□□□□□ -0.17
CLN3-218ENST00000565688 SERPINE2P07093 398 aa14.01□□□□□ -0.17
CLN3-218ENST00000565688 OR13C7P0DN81 318 aa14.01□□□□□ -0.17
CLN3-218ENST00000565688 F2RP25116 425 aa14.01□□□□□ -0.17
CLN3-218ENST00000565688 TAS2R46P59540 309 aa14.01□□□□□ -0.17
CLN3-218ENST00000565688 ZNF585BQ52M93 769 aa14.01□□□□□ -0.17
CLN3-218ENST00000565688 CMTM1Q8IZ96 169 aa14.01□□□□□ -0.17
CLN3-218ENST00000565688 OR1L6Q8NGR2 347 aa14.01□□□□□ -0.17
CLN3-218ENST00000565688 MOB3AQ96BX8 217 aa14.01□□□□□ -0.17
CLN3-218ENST00000565688 ATP6V0BQ99437 205 aa14.01□□□□□ -0.17
CLN3-218ENST00000565688 ZNF2Q9BSG1 426 aaPredicted RBP14.01□□□□□ -0.17
CLN3-218ENST00000565688 C5orf66Q9H5L9 145 aa14.01□□□□□ -0.17
CLN3-218ENST00000565688 TEX50A0A1B0GTY4 177 aa14□□□□□ -0.17
CLN3-218ENST00000565688 PGLYRP1O75594 196 aaPredicted RBP14□□□□□ -0.17
CLN3-218ENST00000565688 RLN1P04808 185 aa14□□□□□ -0.17
CLN3-218ENST00000565688 RFX2P48378 723 aa14□□□□□ -0.17
CLN3-218ENST00000565688 TMEM69Q5SWH9 247 aa14□□□□□ -0.17
CLN3-218ENST00000565688 SPSB3Q6PJ21 355 aa14□□□□□ -0.17
CLN3-218ENST00000565688 SLC38A6Q8IZM9 456 aa14□□□□□ -0.17
CLN3-218ENST00000565688 LSM10Q969L4 123 aaKnown RBP14□□□□□ -0.17
CLN3-218ENST00000565688 BSCL2Q96G97 398 aaPredicted RBP14□□□□□ -0.17
CLN3-218ENST00000565688 ANAPC10Q9UM13 185 aa14□□□□□ -0.17
CLN3-218ENST00000565688 IGHV3-35A0A0C4DH35 117 aa13.99□□□□□ -0.17
CLN3-218ENST00000565688 SNAPC5O75971 98 aa13.99□□□□□ -0.17
CLN3-218ENST00000565688 RPA2P15927 270 aa13.99□□□□□ -0.17
CLN3-218ENST00000565688 WT1-ASQ06250 92 aa13.99□□□□□ -0.17
CLN3-218ENST00000565688 SLC25A24Q6NUK1 477 aa13.99□□□□□ -0.17
CLN3-218ENST00000565688 OR2C3Q8N628 320 aa13.99□□□□□ -0.17
CLN3-218ENST00000565688 TSPAN14Q8NG11 270 aa13.99□□□□□ -0.17
CLN3-218ENST00000565688 OR5H2Q8NGV7 314 aa13.99□□□□□ -0.17
CLN3-218ENST00000565688 TMEM190Q8WZ59 177 aa13.99□□□□□ -0.17
CLN3-218ENST00000565688 DGCR14Q96DF8 476 aaKnown RBP13.99□□□□□ -0.17
CLN3-218ENST00000565688 SPAG8Q99932 426 aaPredicted RBP13.99□□□□□ -0.17
CLN3-218ENST00000565688 DAZ1Q9NQZ3 744 aaKnown RBP13.99□□□□□ -0.17
CLN3-218ENST00000565688 NDUFA4L2Q9NRX3 87 aa13.99□□□□□ -0.17
CLN3-218ENST00000565688 OR2T8A6NH00 312 aa13.98□□□□□ -0.17
CLN3-218ENST00000565688 KRASP01116 189 aa13.98□□□□□ -0.17
CLN3-218ENST00000565688 PMP2P02689 132 aa13.98□□□□□ -0.17
CLN3-218ENST00000565688 NAT1P18440 290 aa13.98□□□□□ -0.17
CLN3-218ENST00000565688 LPAR6P43657 344 aa13.98□□□□□ -0.17
CLN3-218ENST00000565688 TAS2R20P59543 309 aa13.98□□□□□ -0.17
CLN3-218ENST00000565688 SAMD12Q8N8I0 201 aa13.98□□□□□ -0.17
CLN3-218ENST00000565688 OR6F1Q8NGZ6 308 aa13.98□□□□□ -0.17
CLN3-218ENST00000565688 FCAMRQ8WWV6 532 aa13.98□□□□□ -0.17
CLN3-218ENST00000565688 HINT2Q9BX68 163 aa13.98□□□□□ -0.17
CLN3-218ENST00000565688 FKBP11Q9NYL4 201 aa13.98□□□□□ -0.17
CLN3-218ENST00000565688 OR51B2Q9Y5P1 312 aa13.98□□□□□ -0.17
CLN3-218ENST00000565688 F11RQ9Y624 299 aaKnown RBP13.98□□□□□ -0.17
CLN3-218ENST00000565688 GPR31O00270 319 aa13.97□□□□□ -0.17
CLN3-218ENST00000565688 NDUFA4O00483 81 aa13.97□□□□□ -0.17
CLN3-218ENST00000565688 S100GP29377 79 aa13.97□□□□□ -0.17
CLN3-218ENST00000565688 PRSS3P35030 304 aa13.97□□□□□ -0.17
CLN3-218ENST00000565688 RPS19P39019 145 aaKnown RBP13.97□□□□□ -0.17
CLN3-218ENST00000565688 LAMTOR1Q6IAA8 161 aa13.97□□□□□ -0.17
CLN3-218ENST00000565688 TMEM56Q96MV1 263 aa13.97□□□□□ -0.17
CLN3-218ENST00000565688 OVOL2Q9BRP0 275 aa13.97□□□□□ -0.17
CLN3-218ENST00000565688 VCX3AQ9NNX9 186 aa13.97□□□□□ -0.17
CLN3-218ENST00000565688 C21orf62Q9NYP8 219 aa13.97□□□□□ -0.17
CLN3-218ENST00000565688 PRNDQ9UKY0 176 aa13.97□□□□□ -0.17
CLN3-218ENST00000565688 EPPK1P58107 5090 aaKnown RBP13.96□□□□□ -0.17
CLN3-218ENST00000565688 TSPAN4O14817 238 aa13.96□□□□□ -0.17
CLN3-218ENST00000565688 G6PCP35575 357 aa13.96□□□□□ -0.17
CLN3-218ENST00000565688 APOC4P55056 127 aa13.96□□□□□ -0.17
CLN3-218ENST00000565688 OR5B3Q8NH48 314 aa13.96□□□□□ -0.17
CLN3-218ENST00000565688 TSC22D3Q99576 134 aa13.96□□□□□ -0.17
CLN3-218ENST00000565688 TGFBR1P36897 503 aa13.95□□□□□ -0.18
CLN3-218ENST00000565688 LPCAT3Q6P1A2 487 aa13.95□□□□□ -0.18
CLN3-218ENST00000565688 Q6ZWC4 215 aa13.95□□□□□ -0.18
CLN3-218ENST00000565688 SCARB1Q8WTV0 552 aa13.95□□□□□ -0.18
CLN3-218ENST00000565688 FXYD6Q9H0Q3 95 aa13.95□□□□□ -0.18
CLN3-218ENST00000565688 FAM212BQ9NTI7 297 aaPredicted RBP13.95□□□□□ -0.18
CLN3-218ENST00000565688 TP53TG1Q9Y2A0 90 aa13.95□□□□□ -0.18
CLN3-218ENST00000565688 K7EMT4 169 aa13.94□□□□□ -0.18
CLN3-218ENST00000565688 HRH1P35367 487 aa13.94□□□□□ -0.18
CLN3-218ENST00000565688 MFAP2P55001 183 aa13.94□□□□□ -0.18
CLN3-218ENST00000565688 YIPF6Q96EC8 236 aa13.94□□□□□ -0.18
CLN3-218ENST00000565688 TMEM14BQ9NUH8 114 aa13.94□□□□□ -0.18
CLN3-218ENST00000565688 NSG2Q9Y328 171 aa13.94□□□□□ -0.18
CLN3-218ENST00000565688 SMIM31A0A1B0GVY4 71 aa13.93□□□□□ -0.18
CLN3-218ENST00000565688 OR4C46A6NHA9 309 aa13.93□□□□□ -0.18
CLN3-218ENST00000565688 C15orf62A8K5M9 175 aa13.93□□□□□ -0.18
CLN3-218ENST00000565688 K7EIM0 57 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms