RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 CLVS2Q5SYC1 327 aa1.54□□□□□ -2.16
CHD9-215ENST00000565442 KTN1-AS1Q86SY8 53 aa1.54□□□□□ -2.16
CHD9-215ENST00000565442 SLC22A24Q8N4F4 322 aa1.54□□□□□ -2.16
CHD9-215ENST00000565442 SPZ1Q9BXG8 430 aa1.54□□□□□ -2.16
CHD9-215ENST00000565442 VCX3BQ9H321 246 aa1.54□□□□□ -2.16
CHD9-215ENST00000565442 C9orf84Q5VXU9 1444 aa1.54□□□□□ -2.16
CHD9-215ENST00000565442 FMN1Q68DA7 1419 aa1.54□□□□□ -2.16
CHD9-215ENST00000565442 RRBP1Q9P2E9 1410 aaKnown RBP1.54□□□□□ -2.16
CHD9-215ENST00000565442 UHRF1BP1LA0JNW5 1464 aa1.54□□□□□ -2.16
CHD9-215ENST00000565442 PLEKHH2Q8IVE3 1493 aa1.54□□□□□ -2.16
CHD9-215ENST00000565442 MBD5Q9P267 1494 aa1.54□□□□□ -2.16
CHD9-215ENST00000565442 PRDM15P57071 1507 aaPredicted RBP1.54□□□□□ -2.16
CHD9-215ENST00000565442 EFCAB6Q5THR3 1501 aa1.54□□□□□ -2.16
CHD9-215ENST00000565442 KDM5DQ9BY66 1539 aa1.54□□□□□ -2.16
CHD9-215ENST00000565442 FAM135AQ9P2D6 1515 aa1.54□□□□□ -2.16
CHD9-215ENST00000565442 TRPM1Q7Z4N2 1603 aa1.54□□□□□ -2.16
CHD9-215ENST00000565442 TET3O43151 1660 aa1.54□□□□□ -2.16
CHD9-215ENST00000565442 KDM5AP29375 1690 aaKnown RBP1.54□□□□□ -2.16
CHD9-215ENST00000565442 QRICH2Q9H0J4 1663 aa1.54□□□□□ -2.16
CHD9-215ENST00000565442 POLR1AO95602 1720 aaPredicted RBP1.54□□□□□ -2.16
CHD9-215ENST00000565442 UBR1Q8IWV7 1749 aa1.54□□□□□ -2.16
CHD9-215ENST00000565442 NALCNQ8IZF0 1738 aa1.54□□□□□ -2.16
CHD9-215ENST00000565442 ARHGEF28Q8N1W1 1705 aaKnown RBP1.54□□□□□ -2.16
CHD9-215ENST00000565442 RGPD8O14715 1765 aaPredicted RBP1.54□□□□□ -2.16
CHD9-215ENST00000565442 FN1P02751 2386 aaKnown RBP1.54□□□□□ -2.16
CHD9-215ENST00000565442 OR4C45A6NMZ5 311 aa1.53□□□□□ -2.16
CHD9-215ENST00000565442 LST1O00453 97 aa1.53□□□□□ -2.16
CHD9-215ENST00000565442 ABCC3O15438 1527 aa1.53□□□□□ -2.16
CHD9-215ENST00000565442 KIF1BO60333 1816 aa1.53□□□□□ -2.16
CHD9-215ENST00000565442 NSA2O95478 260 aaKnown RBP1.53□□□□□ -2.16
CHD9-215ENST00000565442 LGALS1P09382 135 aaKnown RBP1.53□□□□□ -2.16
CHD9-215ENST00000565442 GLI2P10070 1586 aa1.53□□□□□ -2.16
CHD9-215ENST00000565442 TMEM155Q4W5P6 130 aa1.53□□□□□ -2.16
CHD9-215ENST00000565442 TNFAIP8L3Q5GJ75 292 aa1.53□□□□□ -2.16
CHD9-215ENST00000565442 ZMYM4Q5VZL5 1548 aa1.53□□□□□ -2.16
CHD9-215ENST00000565442 CCDC141Q6ZP82 1450 aa1.53□□□□□ -2.16
CHD9-215ENST00000565442 EVC2Q86UK5 1308 aa1.53□□□□□ -2.16
CHD9-215ENST00000565442 COA5Q86WW8 74 aa1.53□□□□□ -2.16
CHD9-215ENST00000565442 GID4Q8IVV7 300 aa1.53□□□□□ -2.16
CHD9-215ENST00000565442 TBC1D19Q8N5T2 526 aa1.53□□□□□ -2.16
CHD9-215ENST00000565442 ASB17Q8WXJ9 295 aa1.53□□□□□ -2.16
CHD9-215ENST00000565442 MIA2Q96PC5 1412 aa1.53□□□□□ -2.16
CHD9-215ENST00000565442 EIF2AK4Q9P2K8 1649 aaKnown RBP1.53□□□□□ -2.16
CHD9-215ENST00000565442 NAT8Q9UHE5 227 aa1.53□□□□□ -2.16
CHD9-215ENST00000565442 CUL9Q8IWT3 2517 aa1.52□□□□□ -2.17
CHD9-215ENST00000565442 CR1P17927 2039 aa1.52□□□□□ -2.17
CHD9-215ENST00000565442 MARF1Q9Y4F3 1742 aaKnown RBP1.52□□□□□ -2.17
CHD9-215ENST00000565442 CEP170BQ9Y4F5 1589 aaPredicted RBP1.52□□□□□ -2.17
CHD9-215ENST00000565442 MAGI2Q86UL8 1455 aa1.52□□□□□ -2.17
CHD9-215ENST00000565442 TEX14Q8IWB6 1497 aa1.52□□□□□ -2.17
CHD9-215ENST00000565442 NAIPQ13075 1403 aa1.52□□□□□ -2.17
CHD9-215ENST00000565442 SCAPERQ9BY12 1400 aa1.52□□□□□ -2.17
CHD9-215ENST00000565442 CCNB3Q8WWL7 1395 aa1.52□□□□□ -2.17
CHD9-215ENST00000565442 IGHV1-69-2A0A0G2JMI3 117 aa1.52□□□□□ -2.17
CHD9-215ENST00000565442 A0A1B0GW54 56 aa1.52□□□□□ -2.17
CHD9-215ENST00000565442 C1QCP02747 245 aa1.52□□□□□ -2.17
CHD9-215ENST00000565442 PPBPP02775 128 aa1.52□□□□□ -2.17
CHD9-215ENST00000565442 MYL12AP19105 171 aa1.52□□□□□ -2.17
CHD9-215ENST00000565442 PSMB8P28062 276 aa1.52□□□□□ -2.17
CHD9-215ENST00000565442 RAB13P51153 203 aa1.52□□□□□ -2.17
CHD9-215ENST00000565442 TNFAIP6P98066 277 aaPredicted RBP1.52□□□□□ -2.17
CHD9-215ENST00000565442 AKR1C1Q04828 323 aa1.52□□□□□ -2.17
CHD9-215ENST00000565442 FABP9Q0Z7S8 132 aa1.52□□□□□ -2.17
CHD9-215ENST00000565442 BATFQ16520 125 aa1.52□□□□□ -2.17
CHD9-215ENST00000565442 SSX8Q7RTT4 187 aa1.52□□□□□ -2.17
CHD9-215ENST00000565442 ZNF550Q7Z398 422 aa1.52□□□□□ -2.17
CHD9-215ENST00000565442 ZNF563Q8TA94 476 aa1.52□□□□□ -2.17
CHD9-215ENST00000565442 DOK5Q9P104 306 aa1.52□□□□□ -2.17
CHD9-215ENST00000565442 STRCQ7RTU9 1775 aa1.52□□□□□ -2.17
CHD9-215ENST00000565442 ABCA3Q99758 1704 aa1.52□□□□□ -2.17
CHD9-215ENST00000565442 TMEM131LA2VDJ0 1609 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 LAMC1P11047 1609 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 USP32Q8NFA0 1604 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 MAP3K1Q13233 1512 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 NEXMIFQ5QGS0 1516 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 ADGRL2O95490 1459 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 PTPRMP28827 1452 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 SHANK2Q9UPX8 1470 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 CD109Q6YHK3 1445 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 NUMA1Q14980 2115 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 TRGV2A0A075B6R0 118 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 TRAV7A0A075B6U4 112 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 TRAV38-1A0A0B4J264 116 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 IGHV1-18A0A0C4DH31 117 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 H7C2G1 150 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 I3L521 148 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 ZNF737O75373 536 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 CCR7P32248 378 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 AP2S1P53680 142 aaPredicted RBP1.51□□□□□ -2.17
CHD9-215ENST00000565442 EMP1P54849 157 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 AQP4P55087 323 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 TCL1AP56279 114 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 RAB14P61106 215 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 NAA20P61599 178 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 EMX1Q04741 257 aaPredicted RBP1.51□□□□□ -2.17
CHD9-215ENST00000565442 TMEM42Q69YG0 159 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 CD200R1LQ6Q8B3 271 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 C10orf126Q8N4M7 172 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 SLC7A6Q92536 515 aa1.51□□□□□ -2.17
CHD9-215ENST00000565442 DOHHQ9BU89 302 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms