RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 NECAP1Q8NC96 275 aa7.66□□□□□ -1.18
CDH1-206ENST00000564676 OR51S1Q8NGJ8 323 aa7.66□□□□□ -1.18
CDH1-206ENST00000564676 OR4A16Q8NH70 328 aa7.66□□□□□ -1.18
CDH1-206ENST00000564676 MRAPQ8TCY5 172 aa7.66□□□□□ -1.18
CDH1-206ENST00000564676 MRGPRFQ96AM1 343 aa7.66□□□□□ -1.18
CDH1-206ENST00000564676 TSC22D3Q99576 134 aa7.66□□□□□ -1.18
CDH1-206ENST00000564676 SRSF8Q9BRL6 282 aaKnown RBP7.66□□□□□ -1.18
CDH1-206ENST00000564676 QTRT1Q9BXR0 403 aaKnown RBP7.66□□□□□ -1.18
CDH1-206ENST00000564676 AKIP1Q9NQ31 210 aa7.66□□□□□ -1.18
CDH1-206ENST00000564676 PGPEP1Q9NXJ5 209 aa7.66□□□□□ -1.18
CDH1-206ENST00000564676 FKBP11Q9NYL4 201 aa7.66□□□□□ -1.18
CDH1-206ENST00000564676 PEF1Q9UBV8 284 aaKnown RBP7.66□□□□□ -1.18
CDH1-206ENST00000564676 ZMAT5Q9UDW3 170 aaKnown RBP7.66□□□□□ -1.18
CDH1-206ENST00000564676 SCP2D1Q9UJQ7 156 aa7.66□□□□□ -1.18
CDH1-206ENST00000564676 FBXL7Q9UJT9 491 aa7.66□□□□□ -1.18
CDH1-206ENST00000564676 PRNDQ9UKY0 176 aa7.66□□□□□ -1.18
CDH1-206ENST00000564676 OR51B2Q9Y5P1 312 aa7.66□□□□□ -1.18
CDH1-206ENST00000564676 TEX13DA0A0J9YY54 714 aaPredicted RBP7.65□□□□□ -1.18
CDH1-206ENST00000564676 C3orf85A0A1B0GTC6 90 aa7.65□□□□□ -1.18
CDH1-206ENST00000564676 TEX50A0A1B0GTY4 177 aa7.65□□□□□ -1.18
CDH1-206ENST00000564676 CGB1A6NKQ9 187 aa7.65□□□□□ -1.18
CDH1-206ENST00000564676 ATG12O94817 140 aa7.65□□□□□ -1.18
CDH1-206ENST00000564676 FGF2P09038 288 aa7.65□□□□□ -1.18
CDH1-206ENST00000564676 HIST1H1BP16401 226 aaKnown RBP7.65□□□□□ -1.18
CDH1-206ENST00000564676 CTRB1P17538 263 aa7.65□□□□□ -1.18
CDH1-206ENST00000564676 FAUP35544 74 aaKnown RBP7.65□□□□□ -1.18
CDH1-206ENST00000564676 MECP2P51608 486 aaKnown RBP7.65□□□□□ -1.18
CDH1-206ENST00000564676 EGFEM1PQ0D2K5 195 aa7.65□□□□□ -1.18
CDH1-206ENST00000564676 EXOSC2Q13868 293 aaKnown RBP7.65□□□□□ -1.18
CDH1-206ENST00000564676 SURF2Q15527 256 aaPredicted RBP7.65□□□□□ -1.18
CDH1-206ENST00000564676 TRIM16LQ309B1 348 aa7.65□□□□□ -1.18
CDH1-206ENST00000564676 C15orf32Q32M92 178 aa7.65□□□□□ -1.18
CDH1-206ENST00000564676 SP6Q3SY56 376 aa7.65□□□□□ -1.18
CDH1-206ENST00000564676 SPANXN2Q5MJ10 180 aa7.65□□□□□ -1.18
CDH1-206ENST00000564676 CTRB2Q6GPI1 263 aa7.65□□□□□ -1.18
CDH1-206ENST00000564676 C19orf35Q6ZS72 473 aa7.65□□□□□ -1.18
CDH1-206ENST00000564676 CCDC190Q86UF4 302 aa7.65□□□□□ -1.18
CDH1-206ENST00000564676 Q8N402 240 aa7.65□□□□□ -1.18
CDH1-206ENST00000564676 TOMM5Q8N4H5 51 aa7.65□□□□□ -1.18
CDH1-206ENST00000564676 SEC22AQ96IW7 307 aa7.65□□□□□ -1.18
CDH1-206ENST00000564676 SCGB3A2Q96PL1 93 aa7.65□□□□□ -1.18
CDH1-206ENST00000564676 TP53RKQ96S44 253 aa7.65□□□□□ -1.18
CDH1-206ENST00000564676 V9GYH0 126 aa7.65□□□□□ -1.18
CDH1-206ENST00000564676 SORL1Q92673 2214 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 IGLC7A0M8Q6 106 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 CYB5BO43169 146 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 SAP30O75446 220 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 NDUFB8O95169 186 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 IGKV1-39P01597 117 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 TRBV12-3P01733 135 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 IGKV1D-39P04432 117 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 OR13C7P0DN81 318 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 INSL3P51460 131 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 AKR1C2P52895 323 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 AP3S2P59780 193 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 TATDN3Q17R31 274 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 RPEL1Q2QD12 228 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 HSD17B13Q7Z5P4 300 aaPredicted RBP7.64□□□□□ -1.19
CDH1-206ENST00000564676 ZNF429Q86V71 674 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 OR10W1Q8NGF6 305 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 OR6Q1Q8NGQ2 317 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 OR5B3Q8NH48 314 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 RNASE11Q8TAA1 199 aaKnown RBP7.64□□□□□ -1.19
CDH1-206ENST00000564676 TMEM56Q96MV1 263 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 FANCD2OSQ96PS1 177 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 OR4C12Q96R67 309 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 RTBDNQ9BSG5 229 aaPredicted RBP7.64□□□□□ -1.19
CDH1-206ENST00000564676 ELOVL1Q9BW60 279 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 C5orf66Q9H5L9 145 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 NAA60Q9H7X0 242 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 NDUFA4L2Q9NRX3 87 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 SLC2A8Q9NY64 477 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 GPR132Q9UNW8 380 aa7.64□□□□□ -1.19
CDH1-206ENST00000564676 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.63□□□□□ -1.19
CDH1-206ENST00000564676 LOC100996750A0A140TA64 210 aa7.63□□□□□ -1.19
CDH1-206ENST00000564676 WI2-2373I1.2A0A1W2PRP0 233 aa7.63□□□□□ -1.19
CDH1-206ENST00000564676 DBX1A6NMT0 343 aa7.63□□□□□ -1.19
CDH1-206ENST00000564676 C15orf61A6NNL5 157 aa7.63□□□□□ -1.19
CDH1-206ENST00000564676 B3GALNT1O75752 331 aa7.63□□□□□ -1.19
CDH1-206ENST00000564676 IGHV3-23P01764 117 aa7.63□□□□□ -1.19
CDH1-206ENST00000564676 OR5AC1P0C628 307 aa7.63□□□□□ -1.19
CDH1-206ENST00000564676 UCP1P25874 307 aa7.63□□□□□ -1.19
CDH1-206ENST00000564676 ETV6P41212 452 aa7.63□□□□□ -1.19
CDH1-206ENST00000564676 INPP1P49441 399 aa7.63□□□□□ -1.19
CDH1-206ENST00000564676 SYNJ2BPP57105 145 aa7.63□□□□□ -1.19
CDH1-206ENST00000564676 KLF9Q13886 244 aaPredicted RBP7.63□□□□□ -1.19
CDH1-206ENST00000564676 ZNF79Q15937 498 aa7.63□□□□□ -1.19
CDH1-206ENST00000564676 DEFB121Q5J5C9 76 aa7.63□□□□□ -1.19
CDH1-206ENST00000564676 FAM209BQ5JX69 171 aa7.63□□□□□ -1.19
CDH1-206ENST00000564676 SLC25A24Q6NUK1 477 aa7.63□□□□□ -1.19
CDH1-206ENST00000564676 ACSM6Q6P461 480 aa7.63□□□□□ -1.19
CDH1-206ENST00000564676 GDPD1Q8N9F7 314 aa7.63□□□□□ -1.19
CDH1-206ENST00000564676 LSM10Q969L4 123 aaKnown RBP7.63□□□□□ -1.19
CDH1-206ENST00000564676 TRIM63Q969Q1 353 aa7.63□□□□□ -1.19
CDH1-206ENST00000564676 EEF1AKMT3Q96AZ1 226 aa7.63□□□□□ -1.19
CDH1-206ENST00000564676 RRNAD1Q96FB5 475 aaKnown RBP7.63□□□□□ -1.19
CDH1-206ENST00000564676 KRTAP4-6Q9BYQ5 205 aa7.63□□□□□ -1.19
CDH1-206ENST00000564676 TMEM14BQ9NUH8 114 aa7.63□□□□□ -1.19
CDH1-206ENST00000564676 THYN1Q9P016 225 aa7.63□□□□□ -1.19
CDH1-206ENST00000564676 S4R3C0 116 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms