RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 RAB18Q9NP72 206 aa2.77□□□□□ -1.97
CHD9-212ENST00000564641 IL26Q9NPH9 171 aa2.77□□□□□ -1.97
CHD9-212ENST00000564641 HRASLS2Q9NWW9 162 aa2.77□□□□□ -1.97
CHD9-212ENST00000564641 BET1LQ9NYM9 111 aa2.77□□□□□ -1.97
CHD9-212ENST00000564641 SIGLEC8Q9NYZ4 499 aa2.77□□□□□ -1.97
CHD9-212ENST00000564641 OR5AC2Q9NZP5 309 aa2.77□□□□□ -1.97
CHD9-212ENST00000564641 NXT1Q9UKK6 140 aaKnown RBP2.77□□□□□ -1.97
CHD9-212ENST00000564641 RAB22AQ9UL26 194 aa2.77□□□□□ -1.97
CHD9-212ENST00000564641 URGCP-MRPS24S4R325 110 aa2.77□□□□□ -1.97
CHD9-212ENST00000564641 ANKRD12Q6UB98 2062 aa2.77□□□□□ -1.97
CHD9-212ENST00000564641 MED13Q9UHV7 2174 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 COL27A1Q8IZC6 1860 aaPredicted RBP2.76□□□□□ -1.97
CHD9-212ENST00000564641 TRBV24-1A0A075B6N3 115 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 IGHV2-70DA0A0C4DH43 119 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 SERTM2A0A1B0GWG4 89 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 PINLYPA6NC86 204 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 ZFP92A6NM28 416 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 ZNF736B4DX44 427 aaPredicted RBP2.76□□□□□ -1.97
CHD9-212ENST00000564641 G3V4G9 280 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 SLC17A2O00624 439 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 HSD17B6O14756 317 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 ALOX12BO75342 701 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 RCBTB2O95199 551 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 CYB5AP00167 134 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 GAPDHP04406 335 aaKnown RBP2.76□□□□□ -1.97
CHD9-212ENST00000564641 CSN2P05814 226 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 CD55P08174 381 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 SRP19P09132 144 aaKnown RBP2.76□□□□□ -1.97
CHD9-212ENST00000564641 TACSTD2P09758 323 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 CTXN2P0C2S0 81 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 SEC11BP0C7V7 166 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 MPC1LP0DKB6 136 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 AKR1C4P17516 323 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 MDKP21741 143 aaPredicted RBP2.76□□□□□ -1.97
CHD9-212ENST00000564641 MSR1P21757 451 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 RPS4Y1P22090 263 aaKnown RBP2.76□□□□□ -1.97
CHD9-212ENST00000564641 RPL12P30050 165 aaKnown RBP2.76□□□□□ -1.97
CHD9-212ENST00000564641 EFNA3P52797 238 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 RAB11AP62491 216 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 SLC35A1P78382 337 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 HLA-DRB3P79483 266 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 PPP1R1AQ13522 171 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 ENDOGQ14249 297 aaKnown RBP2.76□□□□□ -1.97
CHD9-212ENST00000564641 CDK5R1Q15078 307 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 VAMP3Q15836 100 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 TMEM183BQ1AE95 376 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 SMIM21Q3B7S5 101 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 ACOT6Q3I5F7 207 aaPredicted RBP2.76□□□□□ -1.97
CHD9-212ENST00000564641 TIGITQ495A1 244 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 OCIAD2Q56VL3 154 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 C6orf226Q5I0X4 101 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 COA6Q5JTJ3 125 aaKnown RBP2.76□□□□□ -1.97
CHD9-212ENST00000564641 DNM1P34Q6PK57 102 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 CLEC18BQ6UXF7 455 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 TMPPEQ6ZT21 453 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 COMMD6Q7Z4G1 85 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 S100A7AQ86SG5 101 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 ZGRF1Q86YA3 2104 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 C9orf40Q8IXQ3 194 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 PIANPQ8IYJ0 282 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 CMTM1Q8IZ96 169 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 SYS1Q8N2H4 156 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 RNF175Q8N4F7 328 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 ST6GALNAC3Q8NDV1 305 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 SLC26A10Q8NG04 563 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 OR51A2Q8NGJ7 313 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 OR2T27Q8NH04 317 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 OR2V1Q8NHB1 315 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 GPR119Q8TDV5 335 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 PATE1Q8WXA2 126 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 TMEM234Q8WY98 164 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 NEIL2Q969S2 332 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 RPUSD4Q96CM3 377 aaKnown RBP2.76□□□□□ -1.97
CHD9-212ENST00000564641 SMIM19Q96E16 107 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 NEURL3Q96EH8 262 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 SCGB3A2Q96PL1 93 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 CIB3Q96Q77 187 aaPredicted RBP2.76□□□□□ -1.97
CHD9-212ENST00000564641 OR5B12Q96R08 314 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 VAMP8Q9BV40 100 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 SCRT1Q9BWW7 348 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 MS4A8Q9BY19 250 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 PARP12Q9H0J9 701 aaKnown RBP2.76□□□□□ -1.97
CHD9-212ENST00000564641 CST11Q9H112 138 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 RBKSQ9H477 322 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 SLC17A5Q9NRA2 495 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 TUBG2Q9NRH3 451 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 SLC2A9Q9NRM0 540 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 PNO1Q9NRX1 252 aaKnown RBP2.76□□□□□ -1.97
CHD9-212ENST00000564641 TMEM242Q9NWH2 141 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 KLHL28Q9NXS3 571 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 SLC2A8Q9NY64 477 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 AHSPQ9NZD4 102 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 C14orf166Q9Y224 244 aaKnown RBP2.76□□□□□ -1.97
CHD9-212ENST00000564641 ST3GAL6Q9Y274 331 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 PIKFYVEQ9Y2I7 2098 aa2.76□□□□□ -1.97
CHD9-212ENST00000564641 BSNQ9UPA5 3926 aa2.75□□□□□ -1.97
CHD9-212ENST00000564641 ZNF106Q9H2Y7 1883 aaKnown RBP2.75□□□□□ -1.97
CHD9-212ENST00000564641 ITPR2Q14571 2701 aa2.75□□□□□ -1.97
CHD9-212ENST00000564641 TRAV17A0A0B4J275 112 aa2.75□□□□□ -1.97
CHD9-212ENST00000564641 A0A1B0GV72 72 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms