RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 RBP4P02753 201 aa17.34■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 PRRX1P54821 245 aa17.34■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 HABP2Q14520 560 aaPredicted RBP17.34■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 MIC13Q5XKP0 118 aa17.34■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 WDR25Q64LD2 544 aaPredicted RBP17.34■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 TMEM242Q9NWH2 141 aa17.34■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 A0A1W2PN81 502 aa17.33■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 CHRNA7P36544 502 aa17.33■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 RPL29P47914 159 aaKnown RBP17.33■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 ERHP84090 104 aaKnown RBP17.33■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 BSXQ3C1V8 233 aa17.33■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 OR4F5Q8NH21 305 aa17.33■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 OR4F4Q96R69 305 aa17.33■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 SMIM7Q9BQ49 75 aa17.33■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 PCNX1Q96RV3 2341 aa17.33■□□□□ 0.37
VPS9D1-AS1-202ENST00000562866 hCG_1809904A0A1W2PP81 198 aa17.33■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 A0A1W2PR64 198 aa17.33■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 A0A1W2PRV1 198 aa17.33■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 AGAP20933 346 aa17.33■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 B2MP61769 119 aa17.33■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 VMA21Q3ZAQ7 101 aa17.33■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 CYP2G1PQ6ZSU1 146 aa17.33■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 C11orf42Q8N5U0 333 aa17.33■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 NDUFA4L2Q9NRX3 87 aa17.33■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 LYNX1G3V0Z9 82 aa17.32■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 PAGE4O60829 102 aa17.32■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 CXorf1O96002 111 aa17.32■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 OPN1MWP04001 364 aa17.32■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 OPN1MW2P0DN77 364 aa17.32■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 OPN1MW3P0DN78 364 aa17.32■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 LYNX1P0DP58 116 aa17.32■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 TMEM241Q24JQ0 296 aa17.32■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 GCSAMLQ5JQS6 135 aa17.32■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 ZNF841Q6ZN19 808 aa17.32■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 ZFP82Q8N141 532 aa17.32■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 NANPQ8TBE9 248 aa17.32■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 C1orf159Q96HA4 380 aa17.32■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 TXNDC17Q9BRA2 123 aa17.32■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 CTDSP1Q9GZU7 261 aa17.32■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 PATZ1Q9HBE1 687 aaKnown RBP17.32■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 TLN1Q9Y490 2541 aaKnown RBP17.32■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 RNASE2P10153 161 aaKnown RBP17.31■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 LGALS7P47929 136 aa17.31■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 RHOBP62745 196 aa17.31■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 CDSNQ15517 529 aa17.31■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 TMEM144Q7Z5S9 345 aa17.31■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 STPG3Q8N7X2 389 aa17.31■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 OR8B3Q8NGG8 313 aa17.31■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 OR8B2Q96RD0 313 aa17.31■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 CBLN4Q9NTU7 201 aa17.31■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 MIOXQ9UGB7 285 aa17.31■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 ARFGEF3Q5TH69 2177 aa17.31■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 PDE6DO43924 150 aa17.3■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 STAG3L2P0CL84 134 aa17.3■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 STAG3L3P0CL85 134 aa17.3■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 SSMEM1Q8WWF3 244 aa17.3■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 POLEQ07864 2286 aa17.3■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 C11orf94C9JXX5 98 aa17.3■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 PLA2G5P39877 138 aa17.3■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 DIAPH2-AS1Q14236 149 aa17.3■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 C1QL4Q86Z23 238 aa17.3■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 C8orf46Q8TAG6 207 aa17.3■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 C2CD4CQ8TF44 421 aa17.3■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 GATAD1Q8WUU5 269 aa17.3■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 TIMD4Q96H15 378 aa17.3■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 CLEC7AQ9BXN2 247 aa17.3■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 PIEZO1Q92508 2521 aa17.29■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 IGHV2-26A0A0B4J1V2 119 aa17.29■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 IGLV2-23P01705 113 aa17.29■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 GPX4P36969 197 aaPredicted RBP17.29■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 ZNF674Q2M3X9 581 aa17.29■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 NEU4Q8WWR8 484 aaPredicted RBP17.29■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 CACNG8Q8WXS5 425 aa17.29■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 RPUSD4Q96CM3 377 aaKnown RBP17.29■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 KLF2Q9Y5W3 355 aaPredicted RBP17.29■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 PPIAL4CA0A0B4J2A2 164 aa17.28■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 F6UZH7 168 aa17.28■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 CLDN34H7C241 214 aa17.28■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 C1QTNF9P0C862 333 aa17.28■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 PPIAL4GP0DN37 164 aa17.28■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 DEFA4P12838 97 aa17.28■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 SUB1P53999 127 aaKnown RBP eCLIP17.28■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 PRR20EP86478 221 aa17.28■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 PRR20CP86479 221 aa17.28■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 PRR20DP86480 221 aa17.28■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 PRR20BP86481 221 aa17.28■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 PRR20AP86496 221 aa17.28■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 ELOBQ15370 118 aa17.28■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 MRPL41Q8IXM3 137 aaKnown RBP17.28■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 BEND2Q8NDZ0 799 aa17.28■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 SLC35E1Q96K37 410 aa17.28■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 PARLQ9H300 379 aa17.28■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 PRORYQ9H606 182 aa17.28■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 AMMECR1Q9Y4X0 333 aaPredicted RBP17.28■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 MT-CO2P00403 227 aa17.28■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 IGFBP2P18065 325 aa17.28■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 HLA-DRB5Q30154 266 aa17.28■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 SLC45A2Q9UMX9 530 aa17.28■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 SPTBN4Q9H254 2564 aa17.27■□□□□ 0.36
VPS9D1-AS1-202ENST00000562866 IGLV1-47P01700 117 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms