RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 LST1O00453 97 aa0.44□□□□□ -2.34
CHD9-207ENST00000562806 OR5F1O95221 314 aa0.44□□□□□ -2.34
CHD9-207ENST00000562806 HLA-DRAP01903 254 aa0.44□□□□□ -2.34
CHD9-207ENST00000562806 APOEP02649 317 aa0.44□□□□□ -2.34
CHD9-207ENST00000562806 HLA-DMBP28068 263 aa0.44□□□□□ -2.34
CHD9-207ENST00000562806 ZNF80P51504 273 aaPredicted RBP0.44□□□□□ -2.34
CHD9-207ENST00000562806 UBE2G2P60604 165 aa0.44□□□□□ -2.34
CHD9-207ENST00000562806 TNFAIP6P98066 277 aaPredicted RBP0.44□□□□□ -2.34
CHD9-207ENST00000562806 MED21Q13503 144 aa0.44□□□□□ -2.34
CHD9-207ENST00000562806 PPP1R1AQ13522 171 aa0.44□□□□□ -2.34
CHD9-207ENST00000562806 IBA57Q5T440 356 aaKnown RBP0.44□□□□□ -2.34
CHD9-207ENST00000562806 C1orf194Q5T5A4 169 aa0.44□□□□□ -2.34
CHD9-207ENST00000562806 CST9Q5W186 159 aa0.44□□□□□ -2.34
CHD9-207ENST00000562806 OR4D11Q8NGI4 311 aa0.44□□□□□ -2.34
CHD9-207ENST00000562806 DNAJB3Q8WWF6 145 aa0.44□□□□□ -2.34
CHD9-207ENST00000562806 CMTM5Q96DZ9 223 aa0.44□□□□□ -2.34
CHD9-207ENST00000562806 CXorf21Q9HAI6 301 aa0.44□□□□□ -2.34
CHD9-207ENST00000562806 IMP3Q9NV31 184 aaKnown RBP0.44□□□□□ -2.34
CHD9-207ENST00000562806 COQ4Q9Y3A0 265 aa0.44□□□□□ -2.34
CHD9-207ENST00000562806 LAMB4A4D0S4 1761 aa0.44□□□□□ -2.34
CHD9-207ENST00000562806 NAV1Q8NEY1 1877 aa0.44□□□□□ -2.34
CHD9-207ENST00000562806 LOC110117498A0A087WWA1 95 aa0.43□□□□□ -2.34
CHD9-207ENST00000562806 TRBV6-7A0A0A0MS04 114 aa0.43□□□□□ -2.34
CHD9-207ENST00000562806 A0A1B0GV50 99 aa0.43□□□□□ -2.34
CHD9-207ENST00000562806 GGT3PA6NGU5 568 aa0.43□□□□□ -2.34
CHD9-207ENST00000562806 FABP5P3A8MUU1 101 aa0.43□□□□□ -2.34
CHD9-207ENST00000562806 F5H768 121 aa0.43□□□□□ -2.34
CHD9-207ENST00000562806 KRT7P08729 469 aa0.43□□□□□ -2.34
CHD9-207ENST00000562806 UCHL3P15374 230 aa0.43□□□□□ -2.34
CHD9-207ENST00000562806 SKP1P63208 163 aa0.43□□□□□ -2.34
CHD9-207ENST00000562806 DEFB128Q7Z7B8 93 aa0.43□□□□□ -2.34
CHD9-207ENST00000562806 FAM9CQ8IZT9 166 aa0.43□□□□□ -2.34
CHD9-207ENST00000562806 TMEM161BQ8NDZ6 487 aa0.43□□□□□ -2.34
CHD9-207ENST00000562806 OR8D2Q9GZM6 311 aa0.43□□□□□ -2.34
CHD9-207ENST00000562806 C15orf41Q9Y2V0 281 aa0.43□□□□□ -2.34
CHD9-207ENST00000562806 PXMP4Q9Y6I8 212 aa0.43□□□□□ -2.34
CHD9-207ENST00000562806 KIF24Q5T7B8 1368 aa0.43□□□□□ -2.34
CHD9-207ENST00000562806 ABCC11Q96J66 1382 aa0.43□□□□□ -2.34
CHD9-207ENST00000562806 HEATR5BQ9P2D3 2071 aa0.42□□□□□ -2.34
CHD9-207ENST00000562806 MUC5BQ9HC84 5762 aaPredicted RBP0.42□□□□□ -2.34
CHD9-207ENST00000562806 C1orf232A0A0U1RR37 186 aa0.42□□□□□ -2.34
CHD9-207ENST00000562806 TMEM212A6NML5 194 aa0.42□□□□□ -2.34
CHD9-207ENST00000562806 PFDN6O15212 129 aa0.42□□□□□ -2.34
CHD9-207ENST00000562806 TYMSP04818 313 aa0.42□□□□□ -2.34
CHD9-207ENST00000562806 REG1AP05451 166 aa0.42□□□□□ -2.34
CHD9-207ENST00000562806 C8orf88P0DMB2 117 aa0.42□□□□□ -2.34
CHD9-207ENST00000562806 CCL1P22362 96 aa0.42□□□□□ -2.34
CHD9-207ENST00000562806 UBE2IP63279 158 aaKnown RBP0.42□□□□□ -2.34
CHD9-207ENST00000562806 RUNX1Q01196 453 aa0.42□□□□□ -2.34
CHD9-207ENST00000562806 IFITM2Q01629 132 aa0.42□□□□□ -2.34
CHD9-207ENST00000562806 SPANXN5Q5MJ07 72 aa0.42□□□□□ -2.34
CHD9-207ENST00000562806 SYPL2Q5VXT5 272 aa0.42□□□□□ -2.34
CHD9-207ENST00000562806 COMMD7Q86VX2 200 aa0.42□□□□□ -2.34
CHD9-207ENST00000562806 PHF13Q86YI8 300 aaPredicted RBP0.42□□□□□ -2.34
CHD9-207ENST00000562806 WFDC11Q8NEX6 87 aa0.42□□□□□ -2.34
CHD9-207ENST00000562806 MCFD2Q8NI22 146 aa0.42□□□□□ -2.34
CHD9-207ENST00000562806 TMEM106AQ96A25 262 aa0.42□□□□□ -2.34
CHD9-207ENST00000562806 CFAP53Q96M91 514 aa0.42□□□□□ -2.34
CHD9-207ENST00000562806 MAP1LC3AQ9H492 121 aa0.42□□□□□ -2.34
CHD9-207ENST00000562806 IL36BQ9NZH7 164 aa0.42□□□□□ -2.34
CHD9-207ENST00000562806 CKLFQ9UBR5 152 aa0.42□□□□□ -2.34
CHD9-207ENST00000562806 AHNAKQ09666 5890 aaKnown RBP0.41□□□□□ -2.34
CHD9-207ENST00000562806 DCCP43146 1447 aa0.41□□□□□ -2.34
CHD9-207ENST00000562806 GREB1Q4ZG55 1949 aa0.41□□□□□ -2.34
CHD9-207ENST00000562806 A0A0A6YYH2 397 aa0.41□□□□□ -2.34
CHD9-207ENST00000562806 A6NJ64 397 aa0.41□□□□□ -2.34
CHD9-207ENST00000562806 COCHO43405 550 aa0.41□□□□□ -2.34
CHD9-207ENST00000562806 HYPMO75409 117 aa0.41□□□□□ -2.34
CHD9-207ENST00000562806 OCM2P0CE71 109 aa0.41□□□□□ -2.34
CHD9-207ENST00000562806 RPS4Y1P22090 263 aaKnown RBP0.41□□□□□ -2.34
CHD9-207ENST00000562806 RPL12P30050 165 aaKnown RBP0.41□□□□□ -2.34
CHD9-207ENST00000562806 BRS3P32247 399 aa0.41□□□□□ -2.34
CHD9-207ENST00000562806 EIF2B2P49770 351 aaKnown RBP0.41□□□□□ -2.34
CHD9-207ENST00000562806 CCL20P78556 96 aa0.41□□□□□ -2.34
CHD9-207ENST00000562806 ZNF846Q147U1 533 aa0.41□□□□□ -2.34
CHD9-207ENST00000562806 RSU1Q15404 277 aa0.41□□□□□ -2.34
CHD9-207ENST00000562806 ZNF826PQ6ZT77 177 aa0.41□□□□□ -2.34
CHD9-207ENST00000562806 ZNF550Q7Z398 422 aa0.41□□□□□ -2.34
CHD9-207ENST00000562806 PIGXQ8TBF5 258 aa0.41□□□□□ -2.34
CHD9-207ENST00000562806 RASSF5Q8WWW0 418 aa0.41□□□□□ -2.34
CHD9-207ENST00000562806 DIRAS2Q96HU8 199 aa0.41□□□□□ -2.34
CHD9-207ENST00000562806 UPF3BQ9BZI7 483 aaKnown RBP0.41□□□□□ -2.34
CHD9-207ENST00000562806 PAQR5Q9NXK6 330 aaPredicted RBP0.41□□□□□ -2.34
CHD9-207ENST00000562806 C3orf18Q9UK00 162 aa0.41□□□□□ -2.34
CHD9-207ENST00000562806 KLK9Q9UKQ9 250 aa0.41□□□□□ -2.34
CHD9-207ENST00000562806 ALPK2Q86TB3 2170 aa0.4□□□□□ -2.34
CHD9-207ENST00000562806 TTC21AQ8NDW8 1320 aa0.4□□□□□ -2.34
CHD9-207ENST00000562806 CLDN25C9JDP6 229 aa0.4□□□□□ -2.35
CHD9-207ENST00000562806 CXCR6O00574 342 aa0.4□□□□□ -2.35
CHD9-207ENST00000562806 SLC16A4O15374 487 aa0.4□□□□□ -2.35
CHD9-207ENST00000562806 PRM2P04554 102 aa0.4□□□□□ -2.35
CHD9-207ENST00000562806 FAM228BP0C875 321 aa0.4□□□□□ -2.35
CHD9-207ENST00000562806 MARCKSL1P49006 195 aa0.4□□□□□ -2.35
CHD9-207ENST00000562806 BLVRAP53004 296 aa0.4□□□□□ -2.35
CHD9-207ENST00000562806 SUPT4H1P63272 117 aaKnown RBP0.4□□□□□ -2.35
CHD9-207ENST00000562806 MLLT11Q13015 90 aaPredicted RBP0.4□□□□□ -2.35
CHD9-207ENST00000562806 CLVS2Q5SYC1 327 aa0.4□□□□□ -2.35
CHD9-207ENST00000562806 OGFRL1Q5TC84 451 aaPredicted RBP0.4□□□□□ -2.35
CHD9-207ENST00000562806 C1orf195Q5TG92 126 aa0.4□□□□□ -2.35
CHD9-207ENST00000562806 PDPK2PQ6A1A2 396 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms