RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 NMSQ5H8A3 153 aa10.41□□□□□ -0.74
CDH1-204ENST00000562118 H2BFWTQ7Z2G1 175 aa10.41□□□□□ -0.74
CDH1-204ENST00000562118 CENPSQ8N2Z9 138 aa10.41□□□□□ -0.74
CDH1-204ENST00000562118 WFDC9Q8NEX5 89 aa10.41□□□□□ -0.74
CDH1-204ENST00000562118 OR1L8Q8NGR8 309 aa10.41□□□□□ -0.74
CDH1-204ENST00000562118 ABHD5Q8WTS1 349 aa10.41□□□□□ -0.74
CDH1-204ENST00000562118 COMMD5Q9GZQ3 224 aa10.41□□□□□ -0.74
CDH1-204ENST00000562118 ALX4Q9H161 411 aaPredicted RBP10.41□□□□□ -0.74
CDH1-204ENST00000562118 GNB4Q9HAV0 340 aa10.41□□□□□ -0.74
CDH1-204ENST00000562118 COA4Q9NYJ1 87 aa10.41□□□□□ -0.74
CDH1-204ENST00000562118 KCNIP3Q9Y2W7 256 aa10.41□□□□□ -0.74
CDH1-204ENST00000562118 MEGF8Q7Z7M0 2845 aa10.4□□□□□ -0.74
CDH1-204ENST00000562118 A0A0B4J2A0 478 aa10.4□□□□□ -0.74
CDH1-204ENST00000562118 PIGBOS1A0A0B4J2F0 54 aa10.4□□□□□ -0.74
CDH1-204ENST00000562118 HMX3A6NHT5 357 aa10.4□□□□□ -0.74
CDH1-204ENST00000562118 SFT2D2O95562 160 aa10.4□□□□□ -0.74
CDH1-204ENST00000562118 PF4V1P10720 104 aa10.4□□□□□ -0.74
CDH1-204ENST00000562118 AREGP15514 252 aa10.4□□□□□ -0.74
CDH1-204ENST00000562118 PRCDQ00LT1 54 aa10.4□□□□□ -0.74
CDH1-204ENST00000562118 PPP1R1AQ13522 171 aa10.4□□□□□ -0.74
CDH1-204ENST00000562118 TRIM16LQ309B1 348 aa10.4□□□□□ -0.74
CDH1-204ENST00000562118 PVRIGQ6DKI7 326 aa10.4□□□□□ -0.74
CDH1-204ENST00000562118 TREML4Q6UXN2 200 aa10.4□□□□□ -0.74
CDH1-204ENST00000562118 Q6ZRM9 215 aa10.4□□□□□ -0.74
CDH1-204ENST00000562118 ZNF114Q8NC26 417 aa10.4□□□□□ -0.74
CDH1-204ENST00000562118 FANCD2OSQ96PS1 177 aa10.4□□□□□ -0.74
CDH1-204ENST00000562118 FYTTD1Q96QD9 318 aaKnown RBP10.4□□□□□ -0.74
CDH1-204ENST00000562118 SHPKQ9UHJ6 478 aa10.4□□□□□ -0.74
CDH1-204ENST00000562118 NSG2Q9Y328 171 aa10.4□□□□□ -0.74
CDH1-204ENST00000562118 OR51B2Q9Y5P1 312 aa10.4□□□□□ -0.74
CDH1-204ENST00000562118 IGLV11-55A0A075B6I3 123 aa10.39□□□□□ -0.75
CDH1-204ENST00000562118 FAM223BA6NKX1 122 aa10.39□□□□□ -0.75
CDH1-204ENST00000562118 SNAPC5O75971 98 aa10.39□□□□□ -0.75
CDH1-204ENST00000562118 LGALS1P09382 135 aaKnown RBP10.39□□□□□ -0.75
CDH1-204ENST00000562118 TRAPPC2P0DI81 140 aa10.39□□□□□ -0.75
CDH1-204ENST00000562118 TRAPPC2BP0DI82 140 aa10.39□□□□□ -0.75
CDH1-204ENST00000562118 AKR1C4P17516 323 aa10.39□□□□□ -0.75
CDH1-204ENST00000562118 ANKRD55Q3KP44 614 aa10.39□□□□□ -0.75
CDH1-204ENST00000562118 TMEM65Q6PI78 240 aa10.39□□□□□ -0.75
CDH1-204ENST00000562118 C8orf86Q6ZUL3 223 aa10.39□□□□□ -0.75
CDH1-204ENST00000562118 TMED4Q7Z7H5 227 aa10.39□□□□□ -0.75
CDH1-204ENST00000562118 FAM223AQ8IWN6 122 aa10.39□□□□□ -0.75
CDH1-204ENST00000562118 SLC35G3Q8N808 338 aa10.39□□□□□ -0.75
CDH1-204ENST00000562118 LINC00482Q8N8I6 264 aa10.39□□□□□ -0.75
CDH1-204ENST00000562118 KLHL30-AS1Q8NEE0 82 aa10.39□□□□□ -0.75
CDH1-204ENST00000562118 OR5T1Q8NG75 326 aa10.39□□□□□ -0.75
CDH1-204ENST00000562118 OR52E5Q8NH55 327 aa10.39□□□□□ -0.75
CDH1-204ENST00000562118 RAX2Q96IS3 184 aa10.39□□□□□ -0.75
CDH1-204ENST00000562118 USMG5Q96IX5 58 aa10.39□□□□□ -0.75
CDH1-204ENST00000562118 PHB2Q99623 299 aa10.39□□□□□ -0.75
CDH1-204ENST00000562118 FLVCR2Q9UPI3 526 aa10.39□□□□□ -0.75
CDH1-204ENST00000562118 DMRT1Q9Y5R6 373 aa10.39□□□□□ -0.75
CDH1-204ENST00000562118 TCRBP04435 133 aa10.38□□□□□ -0.75
CDH1-204ENST00000562118 SLC25A6P12236 298 aa10.38□□□□□ -0.75
CDH1-204ENST00000562118 ANXA3P12429 323 aa10.38□□□□□ -0.75
CDH1-204ENST00000562118 MYCNOSP40205 109 aa10.38□□□□□ -0.75
CDH1-204ENST00000562118 AKR1C2P52895 323 aa10.38□□□□□ -0.75
CDH1-204ENST00000562118 HSPE1P61604 102 aaKnown RBP10.38□□□□□ -0.75
CDH1-204ENST00000562118 IZUMO4Q1ZYL8 232 aa10.38□□□□□ -0.75
CDH1-204ENST00000562118 TMEM268Q5VZI3 342 aa10.38□□□□□ -0.75
CDH1-204ENST00000562118 ZNF343Q6P1L6 599 aa10.38□□□□□ -0.75
CDH1-204ENST00000562118 LGI3Q8N145 548 aa10.38□□□□□ -0.75
CDH1-204ENST00000562118 NECAP1Q8NC96 275 aa10.38□□□□□ -0.75
CDH1-204ENST00000562118 OR10W1Q8NGF6 305 aa10.38□□□□□ -0.75
CDH1-204ENST00000562118 CASTOR1Q8WTX7 329 aa10.38□□□□□ -0.75
CDH1-204ENST00000562118 GPR146Q96CH1 333 aa10.38□□□□□ -0.75
CDH1-204ENST00000562118 C20orf85Q9H1P6 137 aa10.38□□□□□ -0.75
CDH1-204ENST00000562118 NOTCH1P46531 2555 aa10.38□□□□□ -0.75
CDH1-204ENST00000562118 A0A0G2JLM5 398 aa10.37□□□□□ -0.75
CDH1-204ENST00000562118 LINC00854A0A1B0GVQ3 168 aa10.37□□□□□ -0.75
CDH1-204ENST00000562118 A0A1W2PRX2 142 aa10.37□□□□□ -0.75
CDH1-204ENST00000562118 C9orf170A2RU37 121 aa10.37□□□□□ -0.75
CDH1-204ENST00000562118 ST8SIA3O43173 380 aa10.37□□□□□ -0.75
CDH1-204ENST00000562118 PITX3O75364 302 aa10.37□□□□□ -0.75
CDH1-204ENST00000562118 TRGV3P03979 118 aa10.37□□□□□ -0.75
CDH1-204ENST00000562118 OR4E1P0C645 316 aa10.37□□□□□ -0.75
CDH1-204ENST00000562118 APELAP0DMC3 54 aa10.37□□□□□ -0.75
CDH1-204ENST00000562118 TPPP2P59282 170 aa10.37□□□□□ -0.75
CDH1-204ENST00000562118 DHRS2Q13268 280 aa10.37□□□□□ -0.75
CDH1-204ENST00000562118 BSXQ3C1V8 233 aa10.37□□□□□ -0.75
CDH1-204ENST00000562118 C19orf35Q6ZS72 473 aa10.37□□□□□ -0.75
CDH1-204ENST00000562118 DUSP18Q8NEJ0 188 aa10.37□□□□□ -0.75
CDH1-204ENST00000562118 OR4A16Q8NH70 328 aa10.37□□□□□ -0.75
CDH1-204ENST00000562118 RRNAD1Q96FB5 475 aaKnown RBP10.37□□□□□ -0.75
CDH1-204ENST00000562118 PRR13Q9NZ81 148 aa10.37□□□□□ -0.75
CDH1-204ENST00000562118 CCL24O00175 119 aa10.36□□□□□ -0.75
CDH1-204ENST00000562118 WIPF1O43516 503 aa10.36□□□□□ -0.75
CDH1-204ENST00000562118 DUS4LO95620 317 aaKnown RBP10.36□□□□□ -0.75
CDH1-204ENST00000562118 HIST1H1BP16401 226 aaKnown RBP10.36□□□□□ -0.75
CDH1-204ENST00000562118 MFAP2P55001 183 aa10.36□□□□□ -0.75
CDH1-204ENST00000562118 RHOGP84095 191 aa10.36□□□□□ -0.75
CDH1-204ENST00000562118 KHDC1LQ5JSQ8 128 aa10.36□□□□□ -0.75
CDH1-204ENST00000562118 LYZL2Q7Z4W2 148 aa10.36□□□□□ -0.75
CDH1-204ENST00000562118 LYG2Q86SG7 212 aa10.36□□□□□ -0.75
CDH1-204ENST00000562118 MRPL41Q8IXM3 137 aaKnown RBP10.36□□□□□ -0.75
CDH1-204ENST00000562118 OR2C3Q8N628 320 aa10.36□□□□□ -0.75
CDH1-204ENST00000562118 MS4A10Q96PG2 267 aa10.36□□□□□ -0.75
CDH1-204ENST00000562118 CACFD1Q9UGQ2 172 aa10.36□□□□□ -0.75
CDH1-204ENST00000562118 F11RQ9Y624 299 aaKnown RBP10.36□□□□□ -0.75
CDH1-204ENST00000562118 DHFRP00374 187 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms