RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 AURKAIP1Q9NWT8 199 aaPredicted RBP7.82□□□□□ -1.16
HERC1-212ENST00000561348 PEF1Q9UBV8 284 aaKnown RBP7.82□□□□□ -1.16
HERC1-212ENST00000561348 SCP2D1Q9UJQ7 156 aa7.82□□□□□ -1.16
HERC1-212ENST00000561348 ZNF257Q9Y2Q1 563 aa7.82□□□□□ -1.16
HERC1-212ENST00000561348 MEGF8Q7Z7M0 2845 aa7.82□□□□□ -1.16
HERC1-212ENST00000561348 CMYA5Q8N3K9 4069 aa7.81□□□□□ -1.16
HERC1-212ENST00000561348 IGHV3-21A0A0B4J1V1 117 aa7.81□□□□□ -1.16
HERC1-212ENST00000561348 A0A1B0GW64 132 aa7.81□□□□□ -1.16
HERC1-212ENST00000561348 ZNF701M0R085 212 aaPredicted RBP7.81□□□□□ -1.16
HERC1-212ENST00000561348 NDUFB8O95169 186 aa7.81□□□□□ -1.16
HERC1-212ENST00000561348 TRBV12-3P01733 135 aa7.81□□□□□ -1.16
HERC1-212ENST00000561348 CTSDP07339 412 aaPredicted RBP7.81□□□□□ -1.16
HERC1-212ENST00000561348 ZNF735P0CB33 412 aa7.81□□□□□ -1.16
HERC1-212ENST00000561348 PSMB6P28072 239 aa7.81□□□□□ -1.16
HERC1-212ENST00000561348 FAUP35544 74 aaKnown RBP7.81□□□□□ -1.16
HERC1-212ENST00000561348 KRTAP10-11P60412 298 aa7.81□□□□□ -1.16
HERC1-212ENST00000561348 RUNX1Q01196 453 aa7.81□□□□□ -1.16
HERC1-212ENST00000561348 ZNF45Q02386 682 aa7.81□□□□□ -1.16
HERC1-212ENST00000561348 RPEL1Q2QD12 228 aa7.81□□□□□ -1.16
HERC1-212ENST00000561348 C15orf32Q32M92 178 aa7.81□□□□□ -1.16
HERC1-212ENST00000561348 TMED4Q7Z7H5 227 aa7.81□□□□□ -1.16
HERC1-212ENST00000561348 HAPLN4Q86UW8 402 aa7.81□□□□□ -1.16
HERC1-212ENST00000561348 RRNAD1Q96FB5 475 aaKnown RBP7.81□□□□□ -1.16
HERC1-212ENST00000561348 ZNF486Q96H40 463 aaPredicted RBP7.81□□□□□ -1.16
HERC1-212ENST00000561348 USMG5Q96IX5 58 aa7.81□□□□□ -1.16
HERC1-212ENST00000561348 OR4C12Q96R67 309 aa7.81□□□□□ -1.16
HERC1-212ENST00000561348 PRR13Q9NZ81 148 aa7.81□□□□□ -1.16
HERC1-212ENST00000561348 PRNDQ9UKY0 176 aa7.81□□□□□ -1.16
HERC1-212ENST00000561348 V9GYH0 126 aa7.81□□□□□ -1.16
HERC1-212ENST00000561348 CGB1A6NKQ9 187 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 FAM223BA6NKX1 122 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 PPP5D1E7EU14 171 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 H0Y980 276 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 IFNA17P01571 189 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 IGKV1-39P01597 117 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 HLA-AP01891 365 aaKnown RBP7.8□□□□□ -1.16
HERC1-212ENST00000561348 IGKV1D-39P04432 117 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 OR5AC1P0C628 307 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 ZP3P21754 424 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 SYNJ2BPP57105 145 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 AP3S2P59780 193 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 FHL3Q13643 280 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 ZNF79Q15937 498 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 POU2AF1Q16633 256 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 TATDN3Q17R31 274 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 CNPY1Q3B7I2 92 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 TRIQKQ629K1 86 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 CLEC19AQ6UXS0 136 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 FAM223AQ8IWN6 122 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 NECAP1Q8NC96 275 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 PRR25Q96S07 402 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 SOSTQ9BQB4 213 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 RTBDNQ9BSG5 229 aaPredicted RBP7.8□□□□□ -1.16
HERC1-212ENST00000561348 PDCD10Q9BUL8 212 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 FKBP11Q9NYL4 201 aa7.8□□□□□ -1.16
HERC1-212ENST00000561348 WI2-2373I1.2A0A1W2PRP0 233 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 ZNF320A2RRD8 509 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 DBX1A6NMT0 343 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 NPIPB5A8MRT5 1133 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 J3QL48 77 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 CYB5BO43169 146 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 ATG12O94817 140 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 NXPH3O95157 252 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 RND3P61587 244 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 ZNF343Q6P1L6 599 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 REC114Q7Z4M0 266 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 CCDC190Q86UF4 302 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 SGPP2Q8IWX5 399 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 UBAC2Q8NBM4 344 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 OR6Q1Q8NGQ2 317 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 LSM10Q969L4 123 aaKnown RBP7.79□□□□□ -1.16
HERC1-212ENST00000561348 EEF1AKMT3Q96AZ1 226 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 SEC22AQ96IW7 307 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 TMEM56Q96MV1 263 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 SCGB3A2Q96PL1 93 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 ELOVL1Q9BW60 279 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 C5orf66Q9H5L9 145 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 NAA60Q9H7X0 242 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 KCNIP3Q9Y2W7 256 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 SELENOKQ9Y6D0 94 aa7.79□□□□□ -1.16
HERC1-212ENST00000561348 IGHV3-35A0A0C4DH35 117 aa7.78□□□□□ -1.16
HERC1-212ENST00000561348 IGLC7A0M8Q6 106 aa7.78□□□□□ -1.16
HERC1-212ENST00000561348 C15orf61A6NNL5 157 aa7.78□□□□□ -1.16
HERC1-212ENST00000561348 OR2C1O95371 312 aa7.78□□□□□ -1.16
HERC1-212ENST00000561348 IGKV1-5P01602 117 aa7.78□□□□□ -1.16
HERC1-212ENST00000561348 HIST1H1BP16401 226 aaKnown RBP7.78□□□□□ -1.16
HERC1-212ENST00000561348 CTRB1P17538 263 aa7.78□□□□□ -1.16
HERC1-212ENST00000561348 VAMP1P23763 118 aa7.78□□□□□ -1.16
HERC1-212ENST00000561348 ARL3P36405 182 aa7.78□□□□□ -1.16
HERC1-212ENST00000561348 ETV6P41212 452 aa7.78□□□□□ -1.16
HERC1-212ENST00000561348 WT1-ASQ06250 92 aa7.78□□□□□ -1.16
HERC1-212ENST00000561348 KLF9Q13886 244 aaPredicted RBP7.78□□□□□ -1.16
HERC1-212ENST00000561348 KPRPQ5T749 579 aaPredicted RBP7.78□□□□□ -1.16
HERC1-212ENST00000561348 TMEM268Q5VZI3 342 aa7.78□□□□□ -1.16
HERC1-212ENST00000561348 CTRB2Q6GPI1 263 aa7.78□□□□□ -1.16
HERC1-212ENST00000561348 SLC35G3Q8N808 338 aa7.78□□□□□ -1.16
HERC1-212ENST00000561348 PINX1Q96BK5 328 aaKnown RBP7.78□□□□□ -1.16
HERC1-212ENST00000561348 MISP3Q96FF7 219 aa7.78□□□□□ -1.16
HERC1-212ENST00000561348 PLEKHA3Q9HB20 300 aa7.78□□□□□ -1.16
HERC1-212ENST00000561348 ENY2Q9NPA8 101 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms