RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 ZNF2Q9BSG1 426 aaPredicted RBP12.16□□□□□ -0.46
SNX1-213ENST00000561026 TEX50A0A1B0GTY4 177 aa12.15□□□□□ -0.46
SNX1-213ENST00000561026 MARCH11A6NNE9 402 aa12.15□□□□□ -0.46
SNX1-213ENST00000561026 CYB5BO43169 146 aa12.15□□□□□ -0.46
SNX1-213ENST00000561026 SCAF4O95104 1147 aaKnown RBP12.15□□□□□ -0.46
SNX1-213ENST00000561026 PMP2P02689 132 aa12.15□□□□□ -0.46
SNX1-213ENST00000561026 RLN1P04808 185 aa12.15□□□□□ -0.46
SNX1-213ENST00000561026 TRAPPC2P0DI81 140 aa12.15□□□□□ -0.46
SNX1-213ENST00000561026 TRAPPC2BP0DI82 140 aa12.15□□□□□ -0.46
SNX1-213ENST00000561026 OR13C7P0DN81 318 aa12.15□□□□□ -0.46
SNX1-213ENST00000561026 NAT1P18440 290 aa12.15□□□□□ -0.46
SNX1-213ENST00000561026 F2RP25116 425 aa12.15□□□□□ -0.46
SNX1-213ENST00000561026 TAS2R46P59540 309 aa12.15□□□□□ -0.46
SNX1-213ENST00000561026 TAS2R20P59543 309 aa12.15□□□□□ -0.46
SNX1-213ENST00000561026 ERVK-16P61578 105 aa12.15□□□□□ -0.46
SNX1-213ENST00000561026 WT1-ASQ06250 92 aa12.15□□□□□ -0.46
SNX1-213ENST00000561026 ANKRD55Q3KP44 614 aa12.15□□□□□ -0.46
SNX1-213ENST00000561026 PLET1Q6UQ28 207 aa12.15□□□□□ -0.46
SNX1-213ENST00000561026 BTNL8Q6UX41 500 aa12.15□□□□□ -0.46
SNX1-213ENST00000561026 HSD17B13Q7Z5P4 300 aaPredicted RBP12.15□□□□□ -0.46
SNX1-213ENST00000561026 SAMD12Q8N8I0 201 aa12.15□□□□□ -0.46
SNX1-213ENST00000561026 GDPD1Q8N9F7 314 aa12.15□□□□□ -0.46
SNX1-213ENST00000561026 OR52B4Q8NGK2 314 aa12.15□□□□□ -0.46
SNX1-213ENST00000561026 VN1R17PQ8TDU5 208 aa12.15□□□□□ -0.46
SNX1-213ENST00000561026 TRAV25A0A0B4J276 109 aa12.14□□□□□ -0.47
SNX1-213ENST00000561026 IGHV3-35A0A0C4DH35 117 aa12.14□□□□□ -0.47
SNX1-213ENST00000561026 SERPINE2P07093 398 aa12.14□□□□□ -0.47
SNX1-213ENST00000561026 ELLP55199 621 aaPredicted RBP12.14□□□□□ -0.47
SNX1-213ENST00000561026 ZNF585BQ52M93 769 aa12.14□□□□□ -0.47
SNX1-213ENST00000561026 CADM3Q8N126 398 aa12.14□□□□□ -0.47
SNX1-213ENST00000561026 OR1L8Q8NGR8 309 aa12.14□□□□□ -0.47
SNX1-213ENST00000561026 OR5H2Q8NGV7 314 aa12.14□□□□□ -0.47
SNX1-213ENST00000561026 FCAMRQ8WWV6 532 aa12.14□□□□□ -0.47
SNX1-213ENST00000561026 DGCR14Q96DF8 476 aaKnown RBP12.14□□□□□ -0.47
SNX1-213ENST00000561026 YIPF6Q96EC8 236 aa12.14□□□□□ -0.47
SNX1-213ENST00000561026 ZNF436Q9C0F3 470 aaPredicted RBP12.14□□□□□ -0.47
SNX1-213ENST00000561026 NDUFA4L2Q9NRX3 87 aa12.14□□□□□ -0.47
SNX1-213ENST00000561026 MRPL27Q9P0M9 148 aaKnown RBP12.14□□□□□ -0.47
SNX1-213ENST00000561026 UFC1Q9Y3C8 167 aa12.14□□□□□ -0.47
SNX1-213ENST00000561026 KRASP01116 189 aa12.13□□□□□ -0.47
SNX1-213ENST00000561026 PRSS3P35030 304 aa12.13□□□□□ -0.47
SNX1-213ENST00000561026 LPAR6P43657 344 aa12.13□□□□□ -0.47
SNX1-213ENST00000561026 LSM3P62310 102 aaKnown RBP12.13□□□□□ -0.47
SNX1-213ENST00000561026 LYSMD2Q8IV50 215 aa12.13□□□□□ -0.47
SNX1-213ENST00000561026 CMTM1Q8IZ96 169 aa12.13□□□□□ -0.47
SNX1-213ENST00000561026 OR6F1Q8NGZ6 308 aa12.13□□□□□ -0.47
SNX1-213ENST00000561026 TGOLN2O43493 480 aa12.12□□□□□ -0.47
SNX1-213ENST00000561026 SLC25A24Q6NUK1 477 aa12.12□□□□□ -0.47
SNX1-213ENST00000561026 RBPMS2Q6ZRY4 209 aaKnown RBP12.12□□□□□ -0.47
SNX1-213ENST00000561026 LSM10Q969L4 123 aaKnown RBP12.12□□□□□ -0.47
SNX1-213ENST00000561026 C5orf66Q9H5L9 145 aa12.12□□□□□ -0.47
SNX1-213ENST00000561026 OR2T8A6NH00 312 aa12.11□□□□□ -0.47
SNX1-213ENST00000561026 GPR31O00270 319 aa12.11□□□□□ -0.47
SNX1-213ENST00000561026 SNAPC5O75971 98 aa12.11□□□□□ -0.47
SNX1-213ENST00000561026 HRH1P35367 487 aa12.11□□□□□ -0.47
SNX1-213ENST00000561026 G6PCP35575 357 aa12.11□□□□□ -0.47
SNX1-213ENST00000561026 MFAP2P55001 183 aa12.11□□□□□ -0.47
SNX1-213ENST00000561026 TSPAN14Q8NG11 270 aa12.11□□□□□ -0.47
SNX1-213ENST00000561026 OR1L6Q8NGR2 347 aa12.11□□□□□ -0.47
SNX1-213ENST00000561026 TMEM190Q8WZ59 177 aa12.11□□□□□ -0.47
SNX1-213ENST00000561026 SLC25A46Q96AG3 418 aa12.11□□□□□ -0.47
SNX1-213ENST00000561026 BSCL2Q96G97 398 aaPredicted RBP12.11□□□□□ -0.47
SNX1-213ENST00000561026 ATP6V0BQ99437 205 aa12.11□□□□□ -0.47
SNX1-213ENST00000561026 GGTLC1Q9BX51 225 aa12.11□□□□□ -0.47
SNX1-213ENST00000561026 HINT2Q9BX68 163 aa12.11□□□□□ -0.47
SNX1-213ENST00000561026 NSG2Q9Y328 171 aa12.11□□□□□ -0.47
SNX1-213ENST00000561026 OR51B2Q9Y5P1 312 aa12.11□□□□□ -0.47
SNX1-213ENST00000561026 F11RQ9Y624 299 aaKnown RBP12.11□□□□□ -0.47
SNX1-213ENST00000561026 DNAH1Q9P2D7 4330 aa12.11□□□□□ -0.47
SNX1-213ENST00000561026 A0A087WXM4 84 aa12.1□□□□□ -0.47
SNX1-213ENST00000561026 LOC102724200A0A096LPH7 203 aaPredicted RBP12.1□□□□□ -0.47
SNX1-213ENST00000561026 HLA-DMAP28067 261 aa12.1□□□□□ -0.47
SNX1-213ENST00000561026 SPSB3Q6PJ21 355 aa12.1□□□□□ -0.47
SNX1-213ENST00000561026 OR5B3Q8NH48 314 aa12.1□□□□□ -0.47
SNX1-213ENST00000561026 SCARB1Q8WTV0 552 aa12.1□□□□□ -0.47
SNX1-213ENST00000561026 SPAG8Q99932 426 aaPredicted RBP12.1□□□□□ -0.47
SNX1-213ENST00000561026 OVOL2Q9BRP0 275 aa12.1□□□□□ -0.47
SNX1-213ENST00000561026 FXYD6Q9H0Q3 95 aa12.1□□□□□ -0.47
SNX1-213ENST00000561026 VCX3AQ9NNX9 186 aa12.1□□□□□ -0.47
SNX1-213ENST00000561026 DAZ1Q9NQZ3 744 aaKnown RBP12.1□□□□□ -0.47
SNX1-213ENST00000561026 C21orf62Q9NYP8 219 aa12.1□□□□□ -0.47
SNX1-213ENST00000561026 PRNDQ9UKY0 176 aa12.1□□□□□ -0.47
SNX1-213ENST00000561026 EIF4EP06730 217 aaKnown RBP12.09□□□□□ -0.47
SNX1-213ENST00000561026 LPCAT3Q6P1A2 487 aa12.09□□□□□ -0.47
SNX1-213ENST00000561026 OR2C3Q8N628 320 aa12.09□□□□□ -0.47
SNX1-213ENST00000561026 GPX8Q8TED1 209 aa12.09□□□□□ -0.47
SNX1-213ENST00000561026 TMEM14BQ9NUH8 114 aa12.09□□□□□ -0.47
SNX1-213ENST00000561026 FKBP11Q9NYL4 201 aa12.09□□□□□ -0.47
SNX1-213ENST00000561026 EPPK1P58107 5090 aaKnown RBP12.09□□□□□ -0.47
SNX1-213ENST00000561026 IGHV3-21A0A0B4J1V1 117 aa12.08□□□□□ -0.48
SNX1-213ENST00000561026 DBX1A6NMT0 343 aa12.08□□□□□ -0.48
SNX1-213ENST00000561026 F8W735 103 aaPredicted RBP12.08□□□□□ -0.48
SNX1-213ENST00000561026 K7EIM0 57 aa12.08□□□□□ -0.48
SNX1-213ENST00000561026 NDUFA4O00483 81 aa12.08□□□□□ -0.48
SNX1-213ENST00000561026 TSPAN4O14817 238 aa12.08□□□□□ -0.48
SNX1-213ENST00000561026 JTBO76095 146 aa12.08□□□□□ -0.48
SNX1-213ENST00000561026 TSPAN5P62079 268 aa12.08□□□□□ -0.48
SNX1-213ENST00000561026 PHLDA2Q53GA4 152 aa12.08□□□□□ -0.48
SNX1-213ENST00000561026 SLC38A6Q8IZM9 456 aa12.08□□□□□ -0.48
SNX1-213ENST00000561026 TMEM56Q96MV1 263 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms