RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 DPPA5A6NC42 116 aa10.07□□□□□ -0.8
SMAD3-213ENST00000560175 ZNF701M0R085 212 aaPredicted RBP10.07□□□□□ -0.8
SMAD3-213ENST00000560175 SERPINE2P07093 398 aa10.07□□□□□ -0.8
SMAD3-213ENST00000560175 CSN3P07498 182 aa10.07□□□□□ -0.8
SMAD3-213ENST00000560175 P0C879 139 aa10.07□□□□□ -0.8
SMAD3-213ENST00000560175 TRAPPC2P0DI81 140 aa10.07□□□□□ -0.8
SMAD3-213ENST00000560175 TRAPPC2BP0DI82 140 aa10.07□□□□□ -0.8
SMAD3-213ENST00000560175 SPNP16150 400 aa10.07□□□□□ -0.8
SMAD3-213ENST00000560175 SYNJ2BPP57105 145 aa10.07□□□□□ -0.8
SMAD3-213ENST00000560175 WT1-ASQ06250 92 aa10.07□□□□□ -0.8
SMAD3-213ENST00000560175 MEF2DQ14814 521 aa10.07□□□□□ -0.8
SMAD3-213ENST00000560175 TATDN3Q17R31 274 aa10.07□□□□□ -0.8
SMAD3-213ENST00000560175 OR10W1Q8NGF6 305 aa10.07□□□□□ -0.8
SMAD3-213ENST00000560175 OR5B3Q8NH48 314 aa10.07□□□□□ -0.8
SMAD3-213ENST00000560175 ZFAND1Q8TCF1 268 aa10.07□□□□□ -0.8
SMAD3-213ENST00000560175 CCDC140Q96MF4 163 aa10.07□□□□□ -0.8
SMAD3-213ENST00000560175 PRR25Q96S07 402 aa10.07□□□□□ -0.8
SMAD3-213ENST00000560175 TSC22D3Q99576 134 aa10.07□□□□□ -0.8
SMAD3-213ENST00000560175 RSL24D1Q9UHA3 163 aaKnown RBP10.07□□□□□ -0.8
SMAD3-213ENST00000560175 PRNDQ9UKY0 176 aa10.07□□□□□ -0.8
SMAD3-213ENST00000560175 ANKRD20A5PA0PJZ0 165 aa10.06□□□□□ -0.8
SMAD3-213ENST00000560175 DBX1A6NMT0 343 aa10.06□□□□□ -0.8
SMAD3-213ENST00000560175 C15orf61A6NNL5 157 aa10.06□□□□□ -0.8
SMAD3-213ENST00000560175 H0Y980 276 aa10.06□□□□□ -0.8
SMAD3-213ENST00000560175 LGALS9O00182 355 aa10.06□□□□□ -0.8
SMAD3-213ENST00000560175 SNAPC5O75971 98 aa10.06□□□□□ -0.8
SMAD3-213ENST00000560175 CTSDP07339 412 aaPredicted RBP10.06□□□□□ -0.8
SMAD3-213ENST00000560175 PIGPP57054 158 aa10.06□□□□□ -0.8
SMAD3-213ENST00000560175 IL18Q14116 193 aa10.06□□□□□ -0.8
SMAD3-213ENST00000560175 SURF2Q15527 256 aaPredicted RBP10.06□□□□□ -0.8
SMAD3-213ENST00000560175 RPEL1Q2QD12 228 aa10.06□□□□□ -0.8
SMAD3-213ENST00000560175 GPHB5Q86YW7 130 aa10.06□□□□□ -0.8
SMAD3-213ENST00000560175 GDPD1Q8N9F7 314 aa10.06□□□□□ -0.8
SMAD3-213ENST00000560175 MCFD2Q8NI22 146 aa10.06□□□□□ -0.8
SMAD3-213ENST00000560175 ATP6V0BQ99437 205 aa10.06□□□□□ -0.8
SMAD3-213ENST00000560175 C6orf62Q9GZU0 229 aaPredicted RBP10.06□□□□□ -0.8
SMAD3-213ENST00000560175 SLC2A8Q9NY64 477 aa10.06□□□□□ -0.8
SMAD3-213ENST00000560175 TRBV7-1A0A0A6YYK4 115 aa10.05□□□□□ -0.8
SMAD3-213ENST00000560175 NOL3O60936 208 aaKnown RBP10.05□□□□□ -0.8
SMAD3-213ENST00000560175 GGCTO75223 188 aaKnown RBP10.05□□□□□ -0.8
SMAD3-213ENST00000560175 B3GALNT1O75752 331 aa10.05□□□□□ -0.8
SMAD3-213ENST00000560175 REG1AP05451 166 aa10.05□□□□□ -0.8
SMAD3-213ENST00000560175 AKAIN1P0CW23 69 aa10.05□□□□□ -0.8
SMAD3-213ENST00000560175 OR13C7P0DN81 318 aa10.05□□□□□ -0.8
SMAD3-213ENST00000560175 GP9P14770 177 aa10.05□□□□□ -0.8
SMAD3-213ENST00000560175 PI3P19957 117 aa10.05□□□□□ -0.8
SMAD3-213ENST00000560175 UCP1P25874 307 aa10.05□□□□□ -0.8
SMAD3-213ENST00000560175 ADAMTSL5Q6ZMM2 481 aa10.05□□□□□ -0.8
SMAD3-213ENST00000560175 OR13C8Q8NGS7 320 aa10.05□□□□□ -0.8
SMAD3-213ENST00000560175 VN1R17PQ8TDU5 208 aa10.05□□□□□ -0.8
SMAD3-213ENST00000560175 CXorf58Q96LI9 332 aa10.05□□□□□ -0.8
SMAD3-213ENST00000560175 TP53RKQ96S44 253 aa10.05□□□□□ -0.8
SMAD3-213ENST00000560175 RTBDNQ9BSG5 229 aaPredicted RBP10.05□□□□□ -0.8
SMAD3-213ENST00000560175 GPR132Q9UNW8 380 aa10.05□□□□□ -0.8
SMAD3-213ENST00000560175 NSG2Q9Y328 171 aa10.05□□□□□ -0.8
SMAD3-213ENST00000560175 OR51B2Q9Y5P1 312 aa10.05□□□□□ -0.8
SMAD3-213ENST00000560175 C3orf85A0A1B0GTC6 90 aa10.04□□□□□ -0.8
SMAD3-213ENST00000560175 FABP12A6NFH5 140 aa10.04□□□□□ -0.8
SMAD3-213ENST00000560175 INS-IGF2F8WCM5 200 aa10.04□□□□□ -0.8
SMAD3-213ENST00000560175 IGKV1-5P01602 117 aa10.04□□□□□ -0.8
SMAD3-213ENST00000560175 DEFA4P12838 97 aa10.04□□□□□ -0.8
SMAD3-213ENST00000560175 PGAM2P15259 253 aa10.04□□□□□ -0.8
SMAD3-213ENST00000560175 MFAP2P55001 183 aa10.04□□□□□ -0.8
SMAD3-213ENST00000560175 H2BFWTQ7Z2G1 175 aa10.04□□□□□ -0.8
SMAD3-213ENST00000560175 Q8N1Y9 231 aa10.04□□□□□ -0.8
SMAD3-213ENST00000560175 OR4C16Q8NGL9 310 aa10.04□□□□□ -0.8
SMAD3-213ENST00000560175 ZNF502Q8TBZ5 544 aa10.04□□□□□ -0.8
SMAD3-213ENST00000560175 MARCH1Q8TCQ1 289 aa10.04□□□□□ -0.8
SMAD3-213ENST00000560175 LSM10Q969L4 123 aaKnown RBP10.04□□□□□ -0.8
SMAD3-213ENST00000560175 EEF1AKMT3Q96AZ1 226 aa10.04□□□□□ -0.8
SMAD3-213ENST00000560175 TMEM56Q96MV1 263 aa10.04□□□□□ -0.8
SMAD3-213ENST00000560175 THAP7Q9BT49 309 aaPredicted RBP10.04□□□□□ -0.8
SMAD3-213ENST00000560175 THYN1Q9P016 225 aa10.04□□□□□ -0.8
SMAD3-213ENST00000560175 PEMTQ9UBM1 199 aa10.04□□□□□ -0.8
SMAD3-213ENST00000560175 F11RQ9Y624 299 aaKnown RBP10.04□□□□□ -0.8
SMAD3-213ENST00000560175 HUWE1Q7Z6Z7 4374 aaKnown RBP10.03□□□□□ -0.8
SMAD3-213ENST00000560175 MFSD2BA6NFX1 497 aa10.03□□□□□ -0.8
SMAD3-213ENST00000560175 DISC1C4P0D8 188 aa10.03□□□□□ -0.8
SMAD3-213ENST00000560175 PPP5D1E7EU14 171 aa10.03□□□□□ -0.8
SMAD3-213ENST00000560175 CDS2O95674 445 aa10.03□□□□□ -0.8
SMAD3-213ENST00000560175 NHLRC4P0CG21 123 aaPredicted RBP10.03□□□□□ -0.8
SMAD3-213ENST00000560175 HSPE1P61604 102 aaKnown RBP10.03□□□□□ -0.8
SMAD3-213ENST00000560175 SCGB2B2Q4G0G5 96 aa10.03□□□□□ -0.8
SMAD3-213ENST00000560175 AARDQ4LEZ3 155 aa10.03□□□□□ -0.8
SMAD3-213ENST00000560175 FAAP20Q6NZ36 180 aa10.03□□□□□ -0.8
SMAD3-213ENST00000560175 CLEC19AQ6UXS0 136 aa10.03□□□□□ -0.8
SMAD3-213ENST00000560175 CCDC71LQ8N9Z2 235 aa10.03□□□□□ -0.8
SMAD3-213ENST00000560175 ZNF114Q8NC26 417 aa10.03□□□□□ -0.8
SMAD3-213ENST00000560175 OR1L6Q8NGR2 347 aa10.03□□□□□ -0.8
SMAD3-213ENST00000560175 OR2K2Q8NGT1 345 aa10.03□□□□□ -0.8
SMAD3-213ENST00000560175 GLYATL2Q8WU03 294 aa10.03□□□□□ -0.8
SMAD3-213ENST00000560175 PRRT1Q99946 306 aa10.03□□□□□ -0.8
SMAD3-213ENST00000560175 C5orf66Q9H5L9 145 aa10.03□□□□□ -0.8
SMAD3-213ENST00000560175 SMAD5-AS1Q9Y6J3 95 aa10.03□□□□□ -0.8
SMAD3-213ENST00000560175 V9GYH0 126 aa10.03□□□□□ -0.8
SMAD3-213ENST00000560175 A0A0B4J293 547 aa10.02□□□□□ -0.81
SMAD3-213ENST00000560175 A8MWP6 167 aa10.02□□□□□ -0.81
SMAD3-213ENST00000560175 A8MZ25 164 aa10.02□□□□□ -0.81
SMAD3-213ENST00000560175 CYB5BO43169 146 aa10.02□□□□□ -0.81
SMAD3-213ENST00000560175 OR2C1O95371 312 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms