RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 UBE2WQ96B02 151 aa11.82□□□□□ -0.52
CSPG4P12-202ENST00000559989 RBM38Q9H0Z9 239 aaKnown RBP11.82□□□□□ -0.52
CSPG4P12-202ENST00000559989 TCF19Q9Y242 345 aa11.82□□□□□ -0.52
CSPG4P12-202ENST00000559989 A0A1W2PRS3 328 aa11.82□□□□□ -0.52
CSPG4P12-202ENST00000559989 GTSCR1Q86UQ5 136 aa11.82□□□□□ -0.52
CSPG4P12-202ENST00000559989 UCN2Q96RP3 112 aa11.82□□□□□ -0.52
CSPG4P12-202ENST00000559989 UCNP55089 124 aa11.82□□□□□ -0.52
CSPG4P12-202ENST00000559989 P2RY6Q15077 328 aa11.82□□□□□ -0.52
CSPG4P12-202ENST00000559989 TMEM167AQ8TBQ9 72 aa11.82□□□□□ -0.52
CSPG4P12-202ENST00000559989 AQP3Q92482 292 aa11.82□□□□□ -0.52
CSPG4P12-202ENST00000559989 SCO2A0A1W2PP80 73 aa11.82□□□□□ -0.52
CSPG4P12-202ENST00000559989 PAX4O43316 350 aa11.82□□□□□ -0.52
CSPG4P12-202ENST00000559989 NRN1Q9NPD7 142 aa11.82□□□□□ -0.52
CSPG4P12-202ENST00000559989 A0A1W2PPC1 479 aa11.81□□□□□ -0.52
CSPG4P12-202ENST00000559989 DUTP33316 252 aaKnown RBP11.81□□□□□ -0.52
CSPG4P12-202ENST00000559989 UNC13CQ8NB66 2214 aa11.81□□□□□ -0.52
CSPG4P12-202ENST00000559989 CD5LO43866 347 aa11.81□□□□□ -0.52
CSPG4P12-202ENST00000559989 IGHV3-23P01764 117 aa11.81□□□□□ -0.52
CSPG4P12-202ENST00000559989 PRADC1Q9BSG0 188 aa11.81□□□□□ -0.52
CSPG4P12-202ENST00000559989 DOCK11Q5JSL3 2073 aa11.81□□□□□ -0.52
CSPG4P12-202ENST00000559989 PROB1E7EW31 1015 aa11.81□□□□□ -0.52
CSPG4P12-202ENST00000559989 ABHD17AQ96GS6 310 aa11.81□□□□□ -0.52
CSPG4P12-202ENST00000559989 IMMP2LQ96T52 175 aa11.81□□□□□ -0.52
CSPG4P12-202ENST00000559989 CGAP01215 116 aa11.81□□□□□ -0.52
CSPG4P12-202ENST00000559989 TRACP01848 142 aa11.81□□□□□ -0.52
CSPG4P12-202ENST00000559989 Q9H3A6 140 aa11.81□□□□□ -0.52
CSPG4P12-202ENST00000559989 IGKV1D-42A0A075B6H8 117 aa11.81□□□□□ -0.52
CSPG4P12-202ENST00000559989 C1QL3Q5VWW1 255 aa11.81□□□□□ -0.52
CSPG4P12-202ENST00000559989 NACAE9PAV3 2078 aa11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 PPBPP02775 128 aa11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 TMEM258P61165 79 aa11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 FAM27BQ5VT28 67 aa11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 DRAM1Q8N682 238 aa11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 SCARF2Q96GP6 870 aaPredicted RBP11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 CRYBG1Q9Y4K1 1723 aa11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 YLPM1P49750 1951 aaKnown RBP11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 LAMB2P55268 1798 aa11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 MYOD1P15172 320 aa11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 GAGE2AQ6NT46 116 aa11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 SPINK8P0C7L1 97 aa11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 CCL3P10147 92 aa11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 ADMP35318 185 aa11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 ZNF124Q15973 351 aa11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 OTORQ9NRC9 128 aa11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 SMPXQ9UHP9 88 aa11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 FOXA2Q9Y261 457 aaPredicted RBP11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 FABP5P3A8MUU1 101 aa11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 AHRRA9YTQ3 701 aa11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 INAFM2P0DMQ5 153 aa11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 EGR4Q05215 589 aa11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 LAGE3Q14657 143 aa11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 HAPLN4Q86UW8 402 aa11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 C1orf162Q8NEQ5 155 aaPredicted RBP11.8□□□□□ -0.52
CSPG4P12-202ENST00000559989 TRGV11A0A075B6L2 103 aa11.79□□□□□ -0.52
CSPG4P12-202ENST00000559989 TTTY12Q9BZ98 90 aa11.79□□□□□ -0.52
CSPG4P12-202ENST00000559989 NPC2P61916 151 aa11.79□□□□□ -0.52
CSPG4P12-202ENST00000559989 PLEKHB2Q96CS7 222 aa11.79□□□□□ -0.52
CSPG4P12-202ENST00000559989 NTN1O95631 604 aa11.79□□□□□ -0.52
CSPG4P12-202ENST00000559989 PSG4Q00888 419 aa11.79□□□□□ -0.52
CSPG4P12-202ENST00000559989 NHLRC3Q5JS37 347 aa11.79□□□□□ -0.52
CSPG4P12-202ENST00000559989 TMEM54Q969K7 222 aa11.79□□□□□ -0.52
CSPG4P12-202ENST00000559989 NDUFAF3Q9BU61 184 aa11.79□□□□□ -0.52
CSPG4P12-202ENST00000559989 IGHV3-64A0A075B6Q5 118 aa11.79□□□□□ -0.52
CSPG4P12-202ENST00000559989 DUSP14O95147 198 aaKnown RBP11.79□□□□□ -0.52
CSPG4P12-202ENST00000559989 TMEM240Q5SV17 173 aa11.79□□□□□ -0.52
CSPG4P12-202ENST00000559989 F2Z2F3 143 aa11.79□□□□□ -0.52
CSPG4P12-202ENST00000559989 PSCAO43653 123 aa11.79□□□□□ -0.52
CSPG4P12-202ENST00000559989 DLL3Q9NYJ7 618 aa11.79□□□□□ -0.52
CSPG4P12-202ENST00000559989 IGLV3-16A0A075B6K0 115 aa11.79□□□□□ -0.52
CSPG4P12-202ENST00000559989 MUC21A0A0G2JKD1 596 aa11.79□□□□□ -0.52
CSPG4P12-202ENST00000559989 MUC21A0A140T8X8 626 aa11.79□□□□□ -0.52
CSPG4P12-202ENST00000559989 ATP5J2P56134 94 aa11.79□□□□□ -0.52
CSPG4P12-202ENST00000559989 MUC21Q5SSG8 566 aa11.79□□□□□ -0.52
CSPG4P12-202ENST00000559989 LINC01555Q8NAE3 123 aa11.79□□□□□ -0.52
CSPG4P12-202ENST00000559989 ATXN7O15265 892 aaPredicted RBP11.78□□□□□ -0.52
CSPG4P12-202ENST00000559989 RPL34P49207 117 aaKnown RBP11.78□□□□□ -0.52
CSPG4P12-202ENST00000559989 GTF3AQ92664 365 aaKnown RBP11.78□□□□□ -0.52
CSPG4P12-202ENST00000559989 SPANXCQ9NY87 97 aa11.78□□□□□ -0.52
CSPG4P12-202ENST00000559989 PPP1R27Q86WC6 154 aa11.78□□□□□ -0.52
CSPG4P12-202ENST00000559989 A0A1B0GTL3 188 aa11.78□□□□□ -0.52
CSPG4P12-202ENST00000559989 ZIC1Q15915 447 aa11.78□□□□□ -0.52
CSPG4P12-202ENST00000559989 CTGFP29279 349 aa11.78□□□□□ -0.52
CSPG4P12-202ENST00000559989 TMEM187Q14656 261 aa11.78□□□□□ -0.52
CSPG4P12-202ENST00000559989 GFI1BQ5VTD9 330 aa11.78□□□□□ -0.52
CSPG4P12-202ENST00000559989 SMCHD1A6NHR9 2005 aa11.77□□□□□ -0.52
CSPG4P12-202ENST00000559989 PRR33A8MZF0 331 aa11.77□□□□□ -0.52
CSPG4P12-202ENST00000559989 ZIC3O60481 467 aa11.77□□□□□ -0.52
CSPG4P12-202ENST00000559989 IGHV3-48P01763 117 aa11.77□□□□□ -0.52
CSPG4P12-202ENST00000559989 FBXL7Q9UJT9 491 aa11.77□□□□□ -0.52
CSPG4P12-202ENST00000559989 IRF3Q14653 427 aa11.77□□□□□ -0.52
CSPG4P12-202ENST00000559989 KIAA0040Q15053 153 aa11.77□□□□□ -0.52
CSPG4P12-202ENST00000559989 CACNG8Q8WXS5 425 aa11.77□□□□□ -0.52
CSPG4P12-202ENST00000559989 DOCK1Q14185 1865 aa11.77□□□□□ -0.52
CSPG4P12-202ENST00000559989 HOXB1P14653 301 aaPredicted RBP11.77□□□□□ -0.53
CSPG4P12-202ENST00000559989 EFNB1P98172 346 aa11.77□□□□□ -0.53
CSPG4P12-202ENST00000559989 ATP5L2Q7Z4Y8 100 aa11.77□□□□□ -0.53
CSPG4P12-202ENST00000559989 SLC25A38Q96DW6 304 aa11.77□□□□□ -0.53
CSPG4P12-202ENST00000559989 MRPS18AQ9NVS2 196 aaKnown RBP11.77□□□□□ -0.53
CSPG4P12-202ENST00000559989 SERF1AO75920 110 aa11.77□□□□□ -0.53
CSPG4P12-202ENST00000559989 UMODP07911 640 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms