RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 Q6YL49 198 aa9.69□□□□□ -0.86
HERC1-205ENST00000559886 TMEM219Q86XT9 240 aa9.69□□□□□ -0.86
HERC1-205ENST00000559886 OR2C3Q8N628 320 aa9.69□□□□□ -0.86
HERC1-205ENST00000559886 HINT2Q9BX68 163 aa9.69□□□□□ -0.86
HERC1-205ENST00000559886 PSENENQ9NZ42 101 aa9.69□□□□□ -0.86
HERC1-205ENST00000559886 PITPNC1Q9UKF7 332 aa9.69□□□□□ -0.86
HERC1-205ENST00000559886 A0A1B0GW64 132 aa9.68□□□□□ -0.86
HERC1-205ENST00000559886 TSC22D2O75157 780 aa9.68□□□□□ -0.86
HERC1-205ENST00000559886 CA2P00918 260 aa9.68□□□□□ -0.86
HERC1-205ENST00000559886 CD99P14209 185 aa9.68□□□□□ -0.86
HERC1-205ENST00000559886 HNF1AP20823 631 aa9.68□□□□□ -0.86
HERC1-205ENST00000559886 RPL12P30050 165 aaKnown RBP9.68□□□□□ -0.86
HERC1-205ENST00000559886 SRP14P37108 136 aaKnown RBP9.68□□□□□ -0.86
HERC1-205ENST00000559886 NUP62P37198 522 aaPredicted RBP9.68□□□□□ -0.86
HERC1-205ENST00000559886 HOXA1P49639 335 aaPredicted RBP9.68□□□□□ -0.86
HERC1-205ENST00000559886 CAV2P51636 162 aa9.68□□□□□ -0.86
HERC1-205ENST00000559886 OR2F1Q13607 317 aa9.68□□□□□ -0.86
HERC1-205ENST00000559886 PLEKHA3Q9HB20 300 aa9.68□□□□□ -0.86
HERC1-205ENST00000559886 MOB4Q9Y3A3 225 aa9.68□□□□□ -0.86
HERC1-205ENST00000559886 HSPB11Q9Y547 144 aa9.68□□□□□ -0.86
HERC1-205ENST00000559886 HIVEP1P15822 2718 aa9.68□□□□□ -0.86
HERC1-205ENST00000559886 FAM24AA6NFZ4 105 aa9.68□□□□□ -0.86
HERC1-205ENST00000559886 INS-IGF2F8WCM5 200 aa9.68□□□□□ -0.86
HERC1-205ENST00000559886 IGHV4-59P01825 116 aa9.68□□□□□ -0.86
HERC1-205ENST00000559886 RPL27AP46776 148 aaKnown RBP9.68□□□□□ -0.86
HERC1-205ENST00000559886 AP2S1P53680 142 aaPredicted RBP9.68□□□□□ -0.86
HERC1-205ENST00000559886 GNB1P62873 340 aa9.68□□□□□ -0.86
HERC1-205ENST00000559886 LY6EQ16553 131 aa9.68□□□□□ -0.86
HERC1-205ENST00000559886 ZNF562Q6V9R5 426 aa9.68□□□□□ -0.86
HERC1-205ENST00000559886 C5orf56Q8N8D9 126 aa9.68□□□□□ -0.86
HERC1-205ENST00000559886 RASL11BQ9BPW5 248 aa9.68□□□□□ -0.86
HERC1-205ENST00000559886 HIPK2Q9H2X6 1198 aa9.68□□□□□ -0.86
HERC1-205ENST00000559886 HEYLQ9NQ87 328 aaPredicted RBP9.68□□□□□ -0.86
HERC1-205ENST00000559886 A0A0D9SG52 128 aa9.67□□□□□ -0.86
HERC1-205ENST00000559886 H3BP45 60 aa9.67□□□□□ -0.86
HERC1-205ENST00000559886 FGF16O43320 207 aa9.67□□□□□ -0.86
HERC1-205ENST00000559886 HLA-DRB1P01911 266 aa9.67□□□□□ -0.86
HERC1-205ENST00000559886 KCNRGQ8N5I3 272 aa9.67□□□□□ -0.86
HERC1-205ENST00000559886 TMEM252Q8N6L7 170 aa9.67□□□□□ -0.86
HERC1-205ENST00000559886 OR10W1Q8NGF6 305 aa9.67□□□□□ -0.86
HERC1-205ENST00000559886 OR5R1Q8NH85 324 aa9.67□□□□□ -0.86
HERC1-205ENST00000559886 ENY2Q9NPA8 101 aa9.67□□□□□ -0.86
HERC1-205ENST00000559886 BOLA1Q9Y3E2 137 aa9.67□□□□□ -0.86
HERC1-205ENST00000559886 HIVEP2P31629 2446 aa9.67□□□□□ -0.86
HERC1-205ENST00000559886 A0A1W2PN81 502 aa9.67□□□□□ -0.86
HERC1-205ENST00000559886 IGSF23A1L1A6 192 aa9.67□□□□□ -0.86
HERC1-205ENST00000559886 CHRNA7P36544 502 aa9.67□□□□□ -0.86
HERC1-205ENST00000559886 SPANXN5Q5MJ07 72 aa9.67□□□□□ -0.86
HERC1-205ENST00000559886 C16orf82Q7Z2V1 217 aa9.67□□□□□ -0.86
HERC1-205ENST00000559886 SRSF12Q8WXF0 261 aaKnown RBP9.67□□□□□ -0.86
HERC1-205ENST00000559886 SLC25A31Q9H0C2 315 aa9.67□□□□□ -0.86
HERC1-205ENST00000559886 CNIH1O95406 144 aa9.66□□□□□ -0.86
HERC1-205ENST00000559886 AMY1AP04745 511 aa9.66□□□□□ -0.86
HERC1-205ENST00000559886 CX3CL1P78423 397 aa9.66□□□□□ -0.86
HERC1-205ENST00000559886 EWSR1Q01844 656 aaKnown RBP eCLIP9.66□□□□□ -0.86
HERC1-205ENST00000559886 FXYD3Q14802 87 aa9.66□□□□□ -0.86
HERC1-205ENST00000559886 TMEM14EPQ6UXP3 125 aa9.66□□□□□ -0.86
HERC1-205ENST00000559886 TMUB2Q71RG4 321 aa9.66□□□□□ -0.86
HERC1-205ENST00000559886 SSMEM1Q8WWF3 244 aa9.66□□□□□ -0.86
HERC1-205ENST00000559886 U3KQ87 197 aa9.66□□□□□ -0.86
HERC1-205ENST00000559886 S100A11P31949 105 aa9.66□□□□□ -0.86
HERC1-205ENST00000559886 NHLH2Q02577 135 aa9.66□□□□□ -0.86
HERC1-205ENST00000559886 WT1-ASQ06250 92 aa9.66□□□□□ -0.86
HERC1-205ENST00000559886 OR4C12Q96R67 309 aa9.66□□□□□ -0.86
HERC1-205ENST00000559886 ARL6Q9H0F7 186 aa9.66□□□□□ -0.86
HERC1-205ENST00000559886 ZC4H2Q9NQZ6 224 aa9.66□□□□□ -0.86
HERC1-205ENST00000559886 STRAPQ9Y3F4 350 aaKnown RBP9.66□□□□□ -0.86
HERC1-205ENST00000559886 IGHV7-81A0A0B4J1V7 117 aa9.65□□□□□ -0.86
HERC1-205ENST00000559886 IGLC7A0M8Q6 106 aa9.65□□□□□ -0.86
HERC1-205ENST00000559886 C15orf62A8K5M9 175 aa9.65□□□□□ -0.86
HERC1-205ENST00000559886 TEX22C9J3V5 150 aa9.65□□□□□ -0.86
HERC1-205ENST00000559886 M0QZK8 103 aa9.65□□□□□ -0.86
HERC1-205ENST00000559886 RPP30P78346 268 aaKnown RBP9.65□□□□□ -0.86
HERC1-205ENST00000559886 CLEC9AQ6UXN8 241 aa9.65□□□□□ -0.86
HERC1-205ENST00000559886 SIGLECL1Q8N7X8 197 aa9.65□□□□□ -0.86
HERC1-205ENST00000559886 SRSF8Q9BRL6 282 aaKnown RBP9.65□□□□□ -0.86
HERC1-205ENST00000559886 BTBD17A6NE02 478 aa9.65□□□□□ -0.86
HERC1-205ENST00000559886 CST7O76096 145 aa9.65□□□□□ -0.86
HERC1-205ENST00000559886 IFNA10P01566 189 aa9.65□□□□□ -0.86
HERC1-205ENST00000559886 METTL15P1P0C7V9 234 aa9.65□□□□□ -0.86
HERC1-205ENST00000559886 SULT1A1P50225 295 aa9.65□□□□□ -0.86
HERC1-205ENST00000559886 ERHP84090 104 aaKnown RBP9.65□□□□□ -0.86
HERC1-205ENST00000559886 NDPQ00604 133 aa9.65□□□□□ -0.86
HERC1-205ENST00000559886 BAXQ07812 192 aa9.65□□□□□ -0.86
HERC1-205ENST00000559886 TMEM267Q0VDI3 215 aaPredicted RBP9.65□□□□□ -0.86
HERC1-205ENST00000559886 BSXQ3C1V8 233 aa9.65□□□□□ -0.86
HERC1-205ENST00000559886 HSD17B13Q7Z5P4 300 aaPredicted RBP9.65□□□□□ -0.86
HERC1-205ENST00000559886 MRPL41Q8IXM3 137 aaKnown RBP9.65□□□□□ -0.86
HERC1-205ENST00000559886 TMEM170AQ8WVE7 144 aa9.65□□□□□ -0.86
HERC1-205ENST00000559886 ARPC1AQ92747 370 aa9.65□□□□□ -0.86
HERC1-205ENST00000559886 HSPB9Q9BQS6 159 aa9.65□□□□□ -0.86
HERC1-205ENST00000559886 VPREB3Q9UKI3 123 aa9.65□□□□□ -0.86
HERC1-205ENST00000559886 MTORP42345 2549 aa9.65□□□□□ -0.87
HERC1-205ENST00000559886 CYSRT1A8MQ03 144 aa9.64□□□□□ -0.87
HERC1-205ENST00000559886 HOXA3O43365 443 aaPredicted RBP9.64□□□□□ -0.87
HERC1-205ENST00000559886 OR13C7P0DN81 318 aa9.64□□□□□ -0.87
HERC1-205ENST00000559886 C4BPBP20851 252 aa9.64□□□□□ -0.87
HERC1-205ENST00000559886 HTR2BP41595 481 aa9.64□□□□□ -0.87
HERC1-205ENST00000559886 ATP5IP56385 69 aaPredicted RBP9.64□□□□□ -0.87
HERC1-205ENST00000559886 STX12Q86Y82 276 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms