RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 TRAPPC2P0DI81 140 aa11.34□□□□□ -0.59
RABGGTA-211ENST00000559850 TRAPPC2BP0DI82 140 aa11.34□□□□□ -0.59
RABGGTA-211ENST00000559850 OR13C7P0DN81 318 aa11.34□□□□□ -0.59
RABGGTA-211ENST00000559850 SPNP16150 400 aa11.34□□□□□ -0.59
RABGGTA-211ENST00000559850 RND3P61587 244 aa11.34□□□□□ -0.59
RABGGTA-211ENST00000559850 SSBP1Q04837 148 aaKnown RBP11.34□□□□□ -0.59
RABGGTA-211ENST00000559850 MEF2DQ14814 521 aa11.34□□□□□ -0.59
RABGGTA-211ENST00000559850 RPEL1Q2QD12 228 aa11.34□□□□□ -0.59
RABGGTA-211ENST00000559850 CLEC19AQ6UXS0 136 aa11.34□□□□□ -0.59
RABGGTA-211ENST00000559850 OR1L8Q8NGR8 309 aa11.34□□□□□ -0.59
RABGGTA-211ENST00000559850 SEC22AQ96IW7 307 aa11.34□□□□□ -0.59
RABGGTA-211ENST00000559850 CCDC140Q96MF4 163 aa11.34□□□□□ -0.59
RABGGTA-211ENST00000559850 OR4C12Q96R67 309 aa11.34□□□□□ -0.59
RABGGTA-211ENST00000559850 ZC4H2Q9NQZ6 224 aa11.34□□□□□ -0.59
RABGGTA-211ENST00000559850 C3orf85A0A1B0GTC6 90 aa11.33□□□□□ -0.6
RABGGTA-211ENST00000559850 ANKRD20A5PA0PJZ0 165 aa11.33□□□□□ -0.6
RABGGTA-211ENST00000559850 DISC1C4P0D8 188 aa11.33□□□□□ -0.6
RABGGTA-211ENST00000559850 H0Y980 276 aa11.33□□□□□ -0.6
RABGGTA-211ENST00000559850 GSTZ1O43708 216 aaPredicted RBP11.33□□□□□ -0.6
RABGGTA-211ENST00000559850 IGKV1-5P01602 117 aa11.33□□□□□ -0.6
RABGGTA-211ENST00000559850 SERPINE2P07093 398 aa11.33□□□□□ -0.6
RABGGTA-211ENST00000559850 EDN2P20800 178 aa11.33□□□□□ -0.6
RABGGTA-211ENST00000559850 INSL3P51460 131 aa11.33□□□□□ -0.6
RABGGTA-211ENST00000559850 MECP2P51608 486 aaKnown RBP11.33□□□□□ -0.6
RABGGTA-211ENST00000559850 SPINK9Q5DT21 86 aa11.33□□□□□ -0.6
RABGGTA-211ENST00000559850 IL34Q6ZMJ4 242 aa11.33□□□□□ -0.6
RABGGTA-211ENST00000559850 H2BFWTQ7Z2G1 175 aa11.33□□□□□ -0.6
RABGGTA-211ENST00000559850 OR51S1Q8NGJ8 323 aa11.33□□□□□ -0.6
RABGGTA-211ENST00000559850 OR9G4Q8NGQ1 327 aa11.33□□□□□ -0.6
RABGGTA-211ENST00000559850 ZNF486Q96H40 463 aaPredicted RBP11.33□□□□□ -0.6
RABGGTA-211ENST00000559850 ELOVL1Q9BW60 279 aa11.33□□□□□ -0.6
RABGGTA-211ENST00000559850 NDUFA4L2Q9NRX3 87 aa11.33□□□□□ -0.6
RABGGTA-211ENST00000559850 COPZ2Q9P299 210 aa11.33□□□□□ -0.6
RABGGTA-211ENST00000559850 SELENOKQ9Y6D0 94 aa11.33□□□□□ -0.6
RABGGTA-211ENST00000559850 V9GYH0 126 aa11.33□□□□□ -0.6
RABGGTA-211ENST00000559850 IGHV3-21A0A0B4J1V1 117 aa11.32□□□□□ -0.6
RABGGTA-211ENST00000559850 C15orf61A6NNL5 157 aa11.32□□□□□ -0.6
RABGGTA-211ENST00000559850 OR2C1O95371 312 aa11.32□□□□□ -0.6
RABGGTA-211ENST00000559850 DHFRP00374 187 aa11.32□□□□□ -0.6
RABGGTA-211ENST00000559850 CTSDP07339 412 aaPredicted RBP11.32□□□□□ -0.6
RABGGTA-211ENST00000559850 PTBP1P26599 531 aaKnown RBP eCLIP11.32□□□□□ -0.6
RABGGTA-211ENST00000559850 MFAP2P55001 183 aa11.32□□□□□ -0.6
RABGGTA-211ENST00000559850 PYDC2Q56P42 97 aa11.32□□□□□ -0.6
RABGGTA-211ENST00000559850 CCDC71LQ8N9Z2 235 aa11.32□□□□□ -0.6
RABGGTA-211ENST00000559850 OR4A16Q8NH70 328 aa11.32□□□□□ -0.6
RABGGTA-211ENST00000559850 ZFAND1Q8TCF1 268 aa11.32□□□□□ -0.6
RABGGTA-211ENST00000559850 RTBDNQ9BSG5 229 aaPredicted RBP11.32□□□□□ -0.6
RABGGTA-211ENST00000559850 THAP7Q9BT49 309 aaPredicted RBP11.32□□□□□ -0.6
RABGGTA-211ENST00000559850 FAM212BQ9NTI7 297 aaPredicted RBP11.32□□□□□ -0.6
RABGGTA-211ENST00000559850 ZMAT5Q9UDW3 170 aaKnown RBP11.32□□□□□ -0.6
RABGGTA-211ENST00000559850 PRNDQ9UKY0 176 aa11.32□□□□□ -0.6
RABGGTA-211ENST00000559850 CSN3P07498 182 aa11.31□□□□□ -0.6
RABGGTA-211ENST00000559850 HIST1H1BP16401 226 aaKnown RBP11.31□□□□□ -0.6
RABGGTA-211ENST00000559850 ZNF79Q15937 498 aa11.31□□□□□ -0.6
RABGGTA-211ENST00000559850 TRIM16LQ309B1 348 aa11.31□□□□□ -0.6
RABGGTA-211ENST00000559850 SLC25A24Q6NUK1 477 aa11.31□□□□□ -0.6
RABGGTA-211ENST00000559850 GDPD1Q8N9F7 314 aa11.31□□□□□ -0.6
RABGGTA-211ENST00000559850 OR6Q1Q8NGQ2 317 aa11.31□□□□□ -0.6
RABGGTA-211ENST00000559850 LSM10Q969L4 123 aaKnown RBP11.31□□□□□ -0.6
RABGGTA-211ENST00000559850 EEF1AKMT3Q96AZ1 226 aa11.31□□□□□ -0.6
RABGGTA-211ENST00000559850 C5orf66Q9H5L9 145 aa11.31□□□□□ -0.6
RABGGTA-211ENST00000559850 TMEM14BQ9NUH8 114 aa11.31□□□□□ -0.6
RABGGTA-211ENST00000559850 MCUBQ9NWR8 336 aa11.31□□□□□ -0.6
RABGGTA-211ENST00000559850 PRR13Q9NZ81 148 aa11.31□□□□□ -0.6
RABGGTA-211ENST00000559850 RABL2AQ9UBK7 228 aaPredicted RBP11.31□□□□□ -0.6
RABGGTA-211ENST00000559850 RABL2BQ9UNT1 228 aa11.31□□□□□ -0.6
RABGGTA-211ENST00000559850 C14orf166Q9Y224 244 aaKnown RBP11.31□□□□□ -0.6
RABGGTA-211ENST00000559850 LSM4Q9Y4Z0 139 aaKnown RBP11.31□□□□□ -0.6
RABGGTA-211ENST00000559850 A0A0G2JRQ6 117 aa11.3□□□□□ -0.6
RABGGTA-211ENST00000559850 IGLV1-51P01701 117 aa11.3□□□□□ -0.6
RABGGTA-211ENST00000559850 FGF2P09038 288 aa11.3□□□□□ -0.6
RABGGTA-211ENST00000559850 OR5AC1P0C628 307 aa11.3□□□□□ -0.6
RABGGTA-211ENST00000559850 GP9P14770 177 aa11.3□□□□□ -0.6
RABGGTA-211ENST00000559850 S100A5P33763 92 aa11.3□□□□□ -0.6
RABGGTA-211ENST00000559850 ARL3P36405 182 aa11.3□□□□□ -0.6
RABGGTA-211ENST00000559850 AKR1C2P52895 323 aa11.3□□□□□ -0.6
RABGGTA-211ENST00000559850 KLK9Q2XQG4 91 aa11.3□□□□□ -0.6
RABGGTA-211ENST00000559850 LHFPL5Q8TAF8 219 aa11.3□□□□□ -0.6
RABGGTA-211ENST00000559850 TRIM63Q969Q1 353 aa11.3□□□□□ -0.6
RABGGTA-211ENST00000559850 SRSF8Q9BRL6 282 aaKnown RBP11.3□□□□□ -0.6
RABGGTA-211ENST00000559850 KLK9Q9UKQ9 250 aa11.3□□□□□ -0.6
RABGGTA-211ENST00000559850 IGHV3-35A0A0C4DH35 117 aa11.29□□□□□ -0.6
RABGGTA-211ENST00000559850 TEX13DA0A0J9YY54 714 aaPredicted RBP11.29□□□□□ -0.6
RABGGTA-211ENST00000559850 GGCTO75223 188 aaKnown RBP11.29□□□□□ -0.6
RABGGTA-211ENST00000559850 GPR183P32249 361 aa11.29□□□□□ -0.6
RABGGTA-211ENST00000559850 CD69Q07108 199 aa11.29□□□□□ -0.6
RABGGTA-211ENST00000559850 KLF9Q13886 244 aaPredicted RBP11.29□□□□□ -0.6
RABGGTA-211ENST00000559850 TATDN3Q17R31 274 aa11.29□□□□□ -0.6
RABGGTA-211ENST00000559850 THOC7Q6I9Y2 204 aaKnown RBP11.29□□□□□ -0.6
RABGGTA-211ENST00000559850 C11orf87Q6NUJ2 197 aa11.29□□□□□ -0.6
RABGGTA-211ENST00000559850 ADAMTSL5Q6ZMM2 481 aa11.29□□□□□ -0.6
RABGGTA-211ENST00000559850 CCDC190Q86UF4 302 aa11.29□□□□□ -0.6
RABGGTA-211ENST00000559850 CADM3Q8N126 398 aa11.29□□□□□ -0.6
RABGGTA-211ENST00000559850 OR5B3Q8NH48 314 aa11.29□□□□□ -0.6
RABGGTA-211ENST00000559850 TSC22D3Q99576 134 aa11.29□□□□□ -0.6
RABGGTA-211ENST00000559850 ASCL2Q99929 193 aa11.29□□□□□ -0.6
RABGGTA-211ENST00000559850 PRRT1Q99946 306 aa11.29□□□□□ -0.6
RABGGTA-211ENST00000559850 NAA60Q9H7X0 242 aa11.29□□□□□ -0.6
RABGGTA-211ENST00000559850 FKBP11Q9NYL4 201 aa11.29□□□□□ -0.6
RABGGTA-211ENST00000559850 GPR132Q9UNW8 380 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms