RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 MIR17HGQ75NE6 70 aa8.21□□□□□ -1.1
LRRC28-216ENST00000559819 NCOR1P1Q9H4R4 102 aa8.21□□□□□ -1.1
LRRC28-216ENST00000559819 RPUSD1Q9UJJ7 312 aaKnown RBP8.21□□□□□ -1.1
LRRC28-216ENST00000559819 DSCAML1Q8TD84 2053 aa8.21□□□□□ -1.1
LRRC28-216ENST00000559819 ZNF318Q5VUA4 2279 aa8.2□□□□□ -1.1
LRRC28-216ENST00000559819 A0A0G2JNJ9 132 aa8.2□□□□□ -1.1
LRRC28-216ENST00000559819 UPK2O00526 184 aa8.2□□□□□ -1.1
LRRC28-216ENST00000559819 NDUFS6O75380 124 aaKnown RBP8.2□□□□□ -1.1
LRRC28-216ENST00000559819 CRYABP02511 175 aaKnown RBP8.2□□□□□ -1.1
LRRC28-216ENST00000559819 REG1BP48304 166 aa8.2□□□□□ -1.1
LRRC28-216ENST00000559819 SLC25A48Q6ZT89 311 aaKnown RBP8.2□□□□□ -1.1
LRRC28-216ENST00000559819 OR4P4Q8NGL7 312 aa8.2□□□□□ -1.1
LRRC28-216ENST00000559819 WFIKKN1Q96NZ8 548 aa8.2□□□□□ -1.1
LRRC28-216ENST00000559819 LRFN3Q9BTN0 628 aa8.2□□□□□ -1.1
LRRC28-216ENST00000559819 Q9UFV3 132 aa8.2□□□□□ -1.1
LRRC28-216ENST00000559819 YLPM1P49750 1951 aaKnown RBP8.2□□□□□ -1.1
LRRC28-216ENST00000559819 TEX50A0A1B0GTY4 177 aa8.2□□□□□ -1.1
LRRC28-216ENST00000559819 ZNF320A2RRD8 509 aa8.2□□□□□ -1.1
LRRC28-216ENST00000559819 DPRXA6NFQ7 191 aa8.2□□□□□ -1.1
LRRC28-216ENST00000559819 NUBP1P53384 320 aa8.2□□□□□ -1.1
LRRC28-216ENST00000559819 OR10W1Q8NGF6 305 aa8.2□□□□□ -1.1
LRRC28-216ENST00000559819 MRPL20Q9BYC9 149 aaKnown RBP8.2□□□□□ -1.1
LRRC28-216ENST00000559819 PRO1933Q9H354 126 aa8.2□□□□□ -1.1
LRRC28-216ENST00000559819 PLEKHA3Q9HB20 300 aa8.2□□□□□ -1.1
LRRC28-216ENST00000559819 RAB9BQ9NP90 201 aa8.2□□□□□ -1.1
LRRC28-216ENST00000559819 CEP250Q9BV73 2442 aa8.2□□□□□ -1.1
LRRC28-216ENST00000559819 DYSFO75923 2080 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 A0A1B0GUS0 222 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 OR4A8P0C604 315 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 LINC00869P0C866 280 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 SAA1P0DJI8 122 aaPredicted RBP8.19□□□□□ -1.1
LRRC28-216ENST00000559819 HIST1H1BP16401 226 aaKnown RBP8.19□□□□□ -1.1
LRRC28-216ENST00000559819 TCF15Q12870 199 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 ADIPOQQ15848 244 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 TEX36Q5VZQ5 186 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 KCNIP4Q6PIL6 250 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 DOLPP1Q86YN1 238 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 OCC1Q8TAD7 63 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 SFRP2Q96HF1 295 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 ADTRPQ96IZ2 230 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 COL25A1Q9BXS0 654 aaPredicted RBP8.19□□□□□ -1.1
LRRC28-216ENST00000559819 TANC2Q9HCD6 1990 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 IGKV1OR2-108A0A075B7D4 117 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 MDFIC2A0A1B0GVS7 189 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 RPL29P47914 159 aaKnown RBP8.19□□□□□ -1.1
LRRC28-216ENST00000559819 RHOBP62745 196 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 PRR20EP86478 221 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 PRR20CP86479 221 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 PRR20DP86480 221 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 PRR20BP86481 221 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 PRR20AP86496 221 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 PRCDQ00LT1 54 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 DIAPH2-AS1Q14236 149 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 POU2AF1Q16633 256 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 HLA-DRB5Q30154 266 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 NEUROG1Q92886 237 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 SLC25A10Q9UBX3 287 aaPredicted RBP8.19□□□□□ -1.1
LRRC28-216ENST00000559819 PRNDQ9UKY0 176 aa8.19□□□□□ -1.1
LRRC28-216ENST00000559819 hADV38S2A0JD32 116 aa8.18□□□□□ -1.1
LRRC28-216ENST00000559819 K7EN84 100 aa8.18□□□□□ -1.1
LRRC28-216ENST00000559819 TYMSP04818 313 aa8.18□□□□□ -1.1
LRRC28-216ENST00000559819 RPL31P62899 125 aaKnown RBP8.18□□□□□ -1.1
LRRC28-216ENST00000559819 BSPH1Q075Z2 132 aa8.18□□□□□ -1.1
LRRC28-216ENST00000559819 RTL8BQ17RB0 113 aa8.18□□□□□ -1.1
LRRC28-216ENST00000559819 LYPD2Q6UXB3 125 aa8.18□□□□□ -1.1
LRRC28-216ENST00000559819 UNQ6494/PRO21346Q6UXR6 183 aa8.18□□□□□ -1.1
LRRC28-216ENST00000559819 CISD2Q8N5K1 135 aaKnown RBP8.18□□□□□ -1.1
LRRC28-216ENST00000559819 SGMS2Q8NHU3 365 aa8.18□□□□□ -1.1
LRRC28-216ENST00000559819 CORO2AQ92828 525 aa8.18□□□□□ -1.1
LRRC28-216ENST00000559819 TP53TG5Q9Y2B4 290 aa8.18□□□□□ -1.1
LRRC28-216ENST00000559819 THBDP07204 575 aa8.18□□□□□ -1.1
LRRC28-216ENST00000559819 CHRNB4P30926 498 aa8.18□□□□□ -1.1
LRRC28-216ENST00000559819 RPL15P61313 204 aaKnown RBP8.18□□□□□ -1.1
LRRC28-216ENST00000559819 TMEM108Q6UXF1 575 aa8.18□□□□□ -1.1
LRRC28-216ENST00000559819 TMEM144Q7Z5S9 345 aa8.18□□□□□ -1.1
LRRC28-216ENST00000559819 NUP37Q8NFH4 326 aa8.18□□□□□ -1.1
LRRC28-216ENST00000559819 NABP2Q9BQ15 211 aa8.18□□□□□ -1.1
LRRC28-216ENST00000559819 LINC00574Q9H8X3 128 aa8.18□□□□□ -1.1
LRRC28-216ENST00000559819 SLC45A2Q9UMX9 530 aa8.18□□□□□ -1.1
LRRC28-216ENST00000559819 ZFHX2Q9C0A1 2572 aaPredicted RBP8.18□□□□□ -1.1
LRRC28-216ENST00000559819 NKX6-3A6NJ46 265 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 C17orf100A8MU93 164 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 E7EUB6 86 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 C16orf97H3BN30 126 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 SLC17A3O00476 420 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 OR10J1P30954 320 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 RAB31Q13636 194 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 TMEM200BQ69YZ2 307 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 OR9G1Q8NH87 305 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 H1FXQ92522 213 aaKnown RBP8.17□□□□□ -1.1
LRRC28-216ENST00000559819 TRAPPC1Q9Y5R8 145 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 LINC00312Q9Y6C7 94 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 ZNF292O60281 2723 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 ROS1P08922 2347 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 MAP1BP46821 2468 aaKnown RBP8.17□□□□□ -1.1
LRRC28-216ENST00000559819 TNCP24821 2201 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 DLL1O00548 723 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 RNASE2P10153 161 aaKnown RBP8.17□□□□□ -1.1
LRRC28-216ENST00000559819 PSG5Q15238 335 aa8.17□□□□□ -1.1
LRRC28-216ENST00000559819 KRTCAP3Q53RY4 240 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms