RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 TIMM21Q9BVV7 248 aa1.84□□□□□ -2.11
CASC4-206ENST00000558847 IL36BQ9NZH7 164 aa1.84□□□□□ -2.11
CASC4-206ENST00000558847 ADAMTS7Q9UKP4 1686 aa1.83□□□□□ -2.12
CASC4-206ENST00000558847 PXDNLA1KZ92 1463 aa1.83□□□□□ -2.12
CASC4-206ENST00000558847 TMEM210A6NLX4 147 aa1.83□□□□□ -2.12
CASC4-206ENST00000558847 SIGLEC16A6NMB1 481 aa1.83□□□□□ -2.12
CASC4-206ENST00000558847 HMSDA8MTL9 139 aa1.83□□□□□ -2.12
CASC4-206ENST00000558847 FABP5P3A8MUU1 101 aa1.83□□□□□ -2.12
CASC4-206ENST00000558847 TMEM114B3SHH9 223 aa1.83□□□□□ -2.12
CASC4-206ENST00000558847 LYPLA2O95372 231 aa1.83□□□□□ -2.12
CASC4-206ENST00000558847 IGHV3-7P01780 117 aa1.83□□□□□ -2.12
CASC4-206ENST00000558847 TTRP02766 147 aa1.83□□□□□ -2.12
CASC4-206ENST00000558847 PSMD8P48556 350 aa1.83□□□□□ -2.12
CASC4-206ENST00000558847 FXYD2P54710 66 aa1.83□□□□□ -2.12
CASC4-206ENST00000558847 STX5Q13190 355 aa1.83□□□□□ -2.12
CASC4-206ENST00000558847 OR13C4Q8NGS5 318 aa1.83□□□□□ -2.12
CASC4-206ENST00000558847 TRIM4Q9C037 500 aa1.83□□□□□ -2.12
CASC4-206ENST00000558847 TIMM22Q9Y584 194 aa1.83□□□□□ -2.12
CASC4-206ENST00000558847 PCNX2A6NKB5 2137 aa1.82□□□□□ -2.12
CASC4-206ENST00000558847 SLX4Q8IY92 1834 aa1.82□□□□□ -2.12
CASC4-206ENST00000558847 ZNF705FA8MVS1 300 aaPredicted RBP1.82□□□□□ -2.12
CASC4-206ENST00000558847 IFNA10P01566 189 aa1.82□□□□□ -2.12
CASC4-206ENST00000558847 TCRBP04435 133 aa1.82□□□□□ -2.12
CASC4-206ENST00000558847 HIST1H2BOP23527 126 aa1.82□□□□□ -2.12
CASC4-206ENST00000558847 HIST1H2BBP33778 126 aa1.82□□□□□ -2.12
CASC4-206ENST00000558847 HIST1H2BDP58876 126 aa1.82□□□□□ -2.12
CASC4-206ENST00000558847 AP3S2P59780 193 aa1.82□□□□□ -2.12
CASC4-206ENST00000558847 LSM6P62312 80 aaKnown RBP1.82□□□□□ -2.12
CASC4-206ENST00000558847 HIST1H2BCP62807 126 aa1.82□□□□□ -2.12
CASC4-206ENST00000558847 HIST1H3AP68431 136 aa1.82□□□□□ -2.12
CASC4-206ENST00000558847 H3F3AP84243 136 aa1.82□□□□□ -2.12
CASC4-206ENST00000558847 HIST2H2BEQ16778 126 aa1.82□□□□□ -2.12
CASC4-206ENST00000558847 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.82□□□□□ -2.12
CASC4-206ENST00000558847 LRRC28Q86X40 367 aaPredicted RBP1.82□□□□□ -2.12
CASC4-206ENST00000558847 OR6V1Q8N148 313 aa1.82□□□□□ -2.12
CASC4-206ENST00000558847 ANKRD29Q8N6D5 301 aa1.82□□□□□ -2.12
CASC4-206ENST00000558847 HIST1H2BHQ93079 126 aa1.82□□□□□ -2.12
CASC4-206ENST00000558847 HIST1H2BNQ99877 126 aa1.82□□□□□ -2.12
CASC4-206ENST00000558847 HIST1H2BMQ99879 126 aa1.82□□□□□ -2.12
CASC4-206ENST00000558847 MRPL27Q9P0M9 148 aaKnown RBP1.82□□□□□ -2.12
CASC4-206ENST00000558847 DOK5Q9P104 306 aa1.82□□□□□ -2.12
CASC4-206ENST00000558847 TMEM56-RWDD3S4R434 201 aa1.82□□□□□ -2.12
CASC4-206ENST00000558847 NUP155O75694 1391 aa1.82□□□□□ -2.12
CASC4-206ENST00000558847 BAHCC1Q9P281 2608 aa1.82□□□□□ -2.12
CASC4-206ENST00000558847 NCOA1Q15788 1441 aa1.82□□□□□ -2.12
CASC4-206ENST00000558847 NYNRINQ9P2P1 1898 aaKnown RBP1.82□□□□□ -2.12
CASC4-206ENST00000558847 DENND4BO75064 1496 aaPredicted RBP1.82□□□□□ -2.12
CASC4-206ENST00000558847 TRBV10-2A0A0K0K1G8 114 aa1.81□□□□□ -2.12
CASC4-206ENST00000558847 GGT3PA6NGU5 568 aa1.81□□□□□ -2.12
CASC4-206ENST00000558847 NAPSAO96009 420 aa1.81□□□□□ -2.12
CASC4-206ENST00000558847 METTL15P1P0C7V9 234 aa1.81□□□□□ -2.12
CASC4-206ENST00000558847 HLA-DMBP28068 263 aa1.81□□□□□ -2.12
CASC4-206ENST00000558847 HBA1P69905 142 aa1.81□□□□□ -2.12
CASC4-206ENST00000558847 SLC38A11Q08AI6 406 aa1.81□□□□□ -2.12
CASC4-206ENST00000558847 TPRXLQ17RH7 258 aa1.81□□□□□ -2.12
CASC4-206ENST00000558847 IAH1Q2TAA2 248 aaPredicted RBP1.81□□□□□ -2.12
CASC4-206ENST00000558847 PCOTHQ58A44 107 aa1.81□□□□□ -2.12
CASC4-206ENST00000558847 SPANXN3Q5MJ09 141 aa1.81□□□□□ -2.12
CASC4-206ENST00000558847 OR2T4Q8NH00 348 aa1.81□□□□□ -2.12
CASC4-206ENST00000558847 CHMP6Q96FZ7 201 aa1.81□□□□□ -2.12
CASC4-206ENST00000558847 PPP1R2P1Q96PQ5 205 aa1.81□□□□□ -2.12
CASC4-206ENST00000558847 NIPSNAP1Q9BPW8 284 aa1.81□□□□□ -2.12
CASC4-206ENST00000558847 C20orf27Q9GZN8 174 aa1.81□□□□□ -2.12
CASC4-206ENST00000558847 CISHQ9NSE2 258 aa1.81□□□□□ -2.12
CASC4-206ENST00000558847 SIPA1L1O43166 1804 aa1.8□□□□□ -2.12
CASC4-206ENST00000558847 A0A1B0GVG6 124 aa1.8□□□□□ -2.12
CASC4-206ENST00000558847 OR4C46A6NHA9 309 aa1.8□□□□□ -2.12
CASC4-206ENST00000558847 CRYZL1O95825 349 aa1.8□□□□□ -2.12
CASC4-206ENST00000558847 C1QCP02747 245 aa1.8□□□□□ -2.12
CASC4-206ENST00000558847 RPL5P46777 297 aaKnown RBP1.8□□□□□ -2.12
CASC4-206ENST00000558847 RANP62826 216 aaKnown RBP1.8□□□□□ -2.12
CASC4-206ENST00000558847 MRPS25P82663 173 aaKnown RBP1.8□□□□□ -2.12
CASC4-206ENST00000558847 MRPS15P82914 257 aaKnown RBP1.8□□□□□ -2.12
CASC4-206ENST00000558847 REEP5Q00765 189 aa1.8□□□□□ -2.12
CASC4-206ENST00000558847 TMEM97Q5BJF2 176 aa1.8□□□□□ -2.12
CASC4-206ENST00000558847 RASSF5Q8WWW0 418 aa1.8□□□□□ -2.12
CASC4-206ENST00000558847 C11orf40Q8WZ69 217 aa1.8□□□□□ -2.12
CASC4-206ENST00000558847 CST9LQ9H4G1 147 aa1.8□□□□□ -2.12
CASC4-206ENST00000558847 FBXL12Q9NXK8 326 aa1.8□□□□□ -2.12
CASC4-206ENST00000558847 GLTPQ9NZD2 209 aa1.8□□□□□ -2.12
CASC4-206ENST00000558847 FLT4P35916 1363 aa1.8□□□□□ -2.12
CASC4-206ENST00000558847 A0A0D9SEW6 157 aa1.79□□□□□ -2.12
CASC4-206ENST00000558847 MEIS3P1A6NDR6 274 aa1.79□□□□□ -2.12
CASC4-206ENST00000558847 OR51F1A6NGY5 319 aa1.79□□□□□ -2.12
CASC4-206ENST00000558847 PPBPP02775 128 aa1.79□□□□□ -2.12
CASC4-206ENST00000558847 CTXN2P0C2S0 81 aa1.79□□□□□ -2.12
CASC4-206ENST00000558847 EVX1P49640 407 aa1.79□□□□□ -2.12
CASC4-206ENST00000558847 KRTAP13-4Q3LI77 160 aa1.79□□□□□ -2.12
CASC4-206ENST00000558847 AADACL3Q5VUY0 350 aa1.79□□□□□ -2.12
CASC4-206ENST00000558847 TOMM6Q96B49 74 aa1.79□□□□□ -2.12
CASC4-206ENST00000558847 BTF3L4Q96K17 158 aa1.79□□□□□ -2.12
CASC4-206ENST00000558847 TSPAN32Q96QS1 320 aa1.79□□□□□ -2.12
CASC4-206ENST00000558847 DERL1Q9BUN8 251 aa1.79□□□□□ -2.12
CASC4-206ENST00000558847 OR8D2Q9GZM6 311 aa1.79□□□□□ -2.12
CASC4-206ENST00000558847 DCSTAMPQ9H295 470 aa1.79□□□□□ -2.12
CASC4-206ENST00000558847 CMTM6Q9NX76 183 aa1.79□□□□□ -2.12
CASC4-206ENST00000558847 FBXO5Q9UKT4 447 aa1.79□□□□□ -2.12
CASC4-206ENST00000558847 ARHGAP32A7KAX9 2087 aa1.79□□□□□ -2.12
CASC4-206ENST00000558847 MPDZO75970 2070 aa1.79□□□□□ -2.12
CASC4-206ENST00000558847 SCN9AQ15858 1988 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms